Results for 1il8a


1il8a        : AKELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPKENWVQRVVEKFLKRAENS : MI1A_RAT
MI1A_RAT     : GADTPTACCFSYG.RQIPRKFIADY.FETSSLCSQPGVIFLTKRNRQICADPKETWVQEYITELELNA... : MI2B_RAT
MI2B_RAT     : ARELRCQCLKTLP.RVDFENIQSLTVTPPGPHCTQTEVIATLKDGQEVCLNPQAPRLQKIIQKLLKSPSL. : GRO2_RABIT
GRO2_RABIT   : VNELRCQCLQTLQ.GIHLKNIQSVKVTTPGPHCDQTEVIASLKTGQEVCLNPTAPVVKKIIDKMLNKASAN : EN78_HUMAN
EN78_HUMAN   : LRELRCVCLQTTQ.GVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILDGGNKE : LIX_MOUSE
LIX_MOUSE    : ATELRCVCLTVTP.KINPKLIANLEVIPAGPQCPTVEVIAKLKNQKEVCLDPEAPVIKKIIQKILGSDKKK : INIG_MOUSE
INIG_MOUSE   : ARTVRCNCIHIDDGPVRMRAIGKLEIIPASLSCPRVEIIATMKNDEQRCLNPESKTIKNLMKAFSQKRSK. : IL8_RABIT
IL8_RABIT    : GTELRCQCIKTHSTPFHPKFIKELRVIESGPHCANSEIIVKLVDGRELCLDPKEKWVQKVVQIFLKRAEQQ : PLF4_SHEEP
PLF4_SHEEP   : EEDLQCVCLKTTS.GIHPRHISSLEVIGAGLHCPSPQLIATLKTGRKICLDQQNPLYKKIIKRLLKN.... : UMSCYA20S3
UMSCYA20S3   : GSDPPTACCFSYTARKLPRNFVVDY.YETSSLCSQPAVVFQTKRGKQVCADPSESWVQEYVYDLELN.... : GRO_CRIGR
GRO_CRIGR    : ANELRCQCLQTMT.GVHLKNIQSLKVTPPGPHCTQTEVIATLKNGQEACLNPEAPMVQKIVQKMLKSGIRK : MCPA_BOVIN
MCPA_BOVIN   : AINSQVACCYTFNSKKISMQRLMNYRRVTSSKCPKEAVIFKTILGKELCADPKQKWVQDSINYLNKKNQTP : AMC2_PIG
AMC2_PIG     : VRELRCMCLTTTP.GIHPKMISDLQVIPAGPQCSKAEVIATLKNGKEVCLDPKAPLIKKIVQKMLDSGKKK : PLFV_HUMAN
PLFV_HUMAN   : .GDLQCLCVKTTS.QVRPRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQALLYKKIIKEHLES.... : GRO1_RABIT
GRO1_RABIT   : LTELRCQCLQTVQ.GIHLKNIQNLKVLSPGPHCAQTEVIATLKSGQEACRNPAAPMVKKFLQKRLSNGNSS : PF4L_HUMAN
PF4L_HUMAN   : YAELRCMCIKTTS.GIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKKLAGDESA : PBSF_HUMAN
PBSF_HUMAN   : SLSYRCPCRFFES.HVARANVKHLK.ILNTPNCALQ.IVARLKNNRQVCIDPKLKWIQEYLEKALNKRFKM : MCP2_HUMAN
MCP2_HUMAN   : SVSIPITCCFNVINRKIPIQRLESYTRITNIQCPKEAVIFKTKRGKEVCADPKERWVRDSMKHLDQIFQNL : HSU64197
HSU64197     : EASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVRLLSKKVKNM : PLF4_RAT
PLF4_RAT     : .GDLSCVCVKTSSSRIHLKRITSLEVIKAGPHCAVPQLIATLKNGSKICLDRQVPLYKKIIKKLLES.... : PLF4_PIG
PLF4_PIG     : .ANLRCVCVKTIS.GVSPKHISSLEVIGAGPHCPSPQLIATLKKGHKICLDPQNLLYKKIIKKLLKSQLLT : RNEOTAXIN
RNEOTAXIN    : ..SIPTSCCFTMTSKKIPNTLLKSYKRITNNRCTLKAIVFKTKLGKEICADPKKKWVQDATKHLDQKLQTP : HSU46767
HSU46767     : ALNVPSTCCFTFSSKKISLQRLKSY.VITTSRCPQKAVIFRTKLGKEICADPKEKWVQNYMKHLGRKAHTL : MCPT_HUMAN
MCPT_HUMAN   : GINTSTTCCYRFINKKIPKQRLESYRRTTSSHCPREAVIFKTKLDKEICADPTQKWVQDFMKHLDKKTQTP : KSU74585
KSU74585     : VSYTPNSCCYGFQQHPPPVQILKEW.YPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRLPAIA... : HSU77180
HSU77180     : TNDAEDCCLSVTQKPIPGYIVRNFHYLLIKDGCRVPAVVFTTLRGRQLCAPPDQPWVERIIQRLQRTSAKM : PF4L_PIG
PF4L_PIG     : HVELRCLCLNTVS.GIHPSNIQSLEVIRAGAHCAKVEVIATLKNDKKICLDPEAPRIKKIVQKIMEDGGSA : INIG_HUMAN
INIG_HUMAN   : SRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKGEKRCLNPESKAIKNLLKAVSKEMSK. : MIG_MOUSE
MIG_MOUSE    : IRNARCSCISTSRGTIHYKSLKDLKQFAPSPNCNKTEIIATLKNGDQTCLDPDSANVKKLMKEWEKKINQK : MIG_HUMAN
MIG_HUMAN    : VRKGRCSCISTNQGTIHLQSLKDLKQFAPSPSCEKIEIIATLKNGVQTCLNPDSADVKELIKKWEKQVSQK : GHU34966
GHU34966     : AVDKRCKCVKVTNRPTGLGPIIAVDVIPPGIHCRRTEIIFALKKNRKVCVDPEAPWVQQFIKKLERQHRTR : EMFI_CHICK
EMFI_CHICK   : GNELRCQCISTHSKFIHPKSIQDVKLTPSGPHCKNVEIIATLKDGREVCLDPTAPWVQLIVKALMAKAQLN : IL8_CAVPO
IL8_CAVPO    : VSELRCQCIKIHTTPFHPKFIKELKVIESGPRCANSEIIVKLSDNRQLCLDPKKKWVQDVVSMFLKRTESQ : CHKCYTO
CHKCYTO      : RSSYSSYCYKNMFIQKEINTSLIRRYRETPPNCSRRAIIVELKKGKKFCVDPAEGWFQQYLQGKKLSNTST : SISF_MOUSE
SISF_MOUSE   : MLTVSNSCCLNTLKKELPLKFIQCY.RKMGSSCPDPAVVFRLNKGRESCASTNKTWVQNHLKKVNPC.... : PEP2_THUTO

             : 2---------12--------22--------32--------42--------52--------62--------7 :
OrigSeq      : AKELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPKENWVQRVVEKFLKRAENS :OrigSeq
cons         : -----EEEEE-----------EEEEEE---------EEEEE-----EEE-----HHHHHHHHHHHHH---- :cons
dsc          : ----EEEEE------------HHEE----------EEEEE---------------HHHHHHHHHHH----- :dsc
mul          : -----EEEEEE----------HHEE-----------HEHHHH----EEEE----HHHHHHHHHHHHH---- :mul
nnssp        : ------EEEE--------------EEE---------EEEEE-----EEEE----HHHHHHHHHHHHHHH-- :nnssp
phd          : -----EEEEE-----------EEEEEEE--------EEEEEE----EEE-----HHHHHHHHHHHHH---- :phd
pred         : ------------------------EEE----------EEEE-----EEEE----HHHHHHHHHHHHHH--- :pred
zpred        : ------EEE------------EEEEE--------EHHHHHHHH---EEEE---HHHHHHHHHHHH------ :zpred

access       : EEEBEBBBBBBBEEE-BBEBBBEBEBBBBEEEBEEBEBBBBBEEEEEBBBEEEEEBBEEBBEEBBEEEEEE : access

PHD Rel      : 99641345411478767632114564214886552212331258856744897357999999999525899 : PHD Rel
Pred Rel     : 00777755666888989777857567688999997677707679976888090768789999997777000 : Predator Rel

dssp         : -----------------HHHEEEEEEE---------EEEEEE---EEEEE----HHHHHHHHHHHHHHHH- :dssp
define       : -EEEE-------EEEE-----EEEEEEEE-----EEEEEE----EEEEEEEE-HHHHHHHHHHHHHHHHHH :define
stride       : -----------------HHHEEEEEEE--E--E---EEEEEE---EEEEE----HHHHHHHHHHHHHHHH- :stride

Q3 values for 1il8a  View SS in Rasmol

	dssp	define	stride
phd	78.87	60.56	76.06
dsc	63.38	53.52	60.56
pred	83.10	64.79	80.28
mul	67.61	49.30	64.79
nnssp	80.28	61.97	77.46
zpred	66.20	54.93	63.38
cons	78.87	60.56	76.06