Results for 1isab-1-GJB


1isab-1-GJB    : SFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPN : S39871
S39871         : SYTLPELGYAYNALEP.FDAQTMEIHHSKHHQAYVNNANAALEGAELVEMYPGHLISL.RGALRNNAGGHTNHSLFWKSLKKG : SODM_HALMA
SODM_HALMA     : NPELPPLPYDYDALEP.ISEQVLTWHHDTHHQGYVNGLESAEETENRDAGDFGSSAAWV..NVTHNGCGQDLHTLFWENMDP. : SODF_PHOLE
SODF_PHOLE     : AFELPALPFAMNALEPHISQETLEYHYGKHHNTYVVKLNGLVEGTELAEKSLEEIIKTSTGGVFNNAAQVWNHTFYWNCLAPN : SODM_MYCSZ
SODM_MYCSZ     : .........................SHSKHHATYVKGANDAVAKEARAQEDFSSILLEK..NLAFNLAGHVNHTIWWKNLSPN : SODF_NICPL
SODF_NICPL     : KFELQPPPYPMDALEPHMSSRTFEFHWGKHHRAYVDNLNKQIDGTELDGKTLEDIILTYPLPAFNNAAQAWNHQFFWESMKPN : SODM_BACSU
SODM_BACSU     : AYELPELPYAYDALEP.IDKETMTIHHTKHHNTYVTNLNKAVEG.ALANKSVEELVALDRTAVRNNGGGHANHKLFWTLLSPN : A42710
A42710         : AILLPDLPYAYDALEP.IDAETMTLHHDKHHATYVANANAALEK.EIGEN.LEVLLAVERQSLINNGGGHLNHALFWELLSP. : JC4981
JC4981         : PHALPPLPYAYDALEP.IDALTMEIHHSKHHQTYVNNLNAALEG.Y.AEQPVESLLRLARTPVVNNGGGHANHSLFWTVMSPQ : SODF_SYNP7
SODF_SYNP7     : SYELPALPFDYTALAPYITKETLEFHHDKHHAAYVNNYNNAVKDTDLDGQPIEAVIKIAKAGLFNNAAQAWNHSFYWNSIKPN : S54792
S54792         : .................IDAETMTLHHDKHHATYVANANAALEK.EIGED.LEALLAVSRQAVINNGGGHLNHALFWELMSP. : SODM_NOCAS
SODM_NOCAS     : EYTLPDLDYDYSALEP.ISGQINELHHSKHHAAYVAGANTALEKAAREAGDHSAIFLEK..NLAFHLGGHVNHSIWWKNLSPN : SODM_XANCP
SODM_XANCP     : AYTLPQLPYAYDALEP.IDAQTMEIHHTKHHQTYINNVNAALEG.Y.ADLPIEELVSLKQGPVRNNGGGHANHSLFWTVLSPN : SODM_YEREN
SODM_YEREN     : SYSLPSLPYAYDALEP.FDKQTMEIHHTKHHQTYVNNANTVLES.ELAKFSVEDLIKL.RTFMRNNAGGHANHSLFWKGLKLG : SODM_PIG
SODM_PIG       : .................INAQIMQLHHSEHHAAYVNNLNVVEEKEALKKGDVTAQVAQP..ALKFNGGGHINHSIFWTNLSPN : GMU56403
GMU56403       : AHVLPDLPYAYNALEP.ISQQIMELHHKKHHQTYVNSLNAAEQAKASTPKER...IAQS..ALKFNGGGHINHSLFWKNLAPA : SOD2_HALSG
SOD2_HALSG     : ..ELPSLPYDYDALEP.ISEQAVTWHHDTHHQSYVDGLNSAEENGNRETGDHASTAGLG..DVTHNGCGHYLHTMFWEHMSP. : S54801
S54801         : .................IDVETMHLHHDKHHNTYVTNLNAAIEK.ELGEKSVEDLISMNRTAVRNNGGGHANHTFFWEIMAPN : RICRMSOA
RICRMSOA       : TVALPDLPYDYGALEP.ISGEIMRLHHQKHHATYVANYNKALEQAAVAKGDAPAIVHQS..AIKFNGGGHVNHSIFWNNLKPI : SODF_PSEAE
SODF_PSEAE     : AFELPPLPYEKNALEPHISAETLEYHHDNNHNTYVVNLTNLIPGTEFEGKSLEEIVKSSSGGIFNNAAQVWNHTFYWNCLSPN : SODM_MAIZE
SODM_MAIZE     : TVTLPDLSYDFGALEP.ISGEIMRLHHQKHHATYVANYNKALEQTAVSKGDASAVVQQA..AIKFNGGGHVNHSIFWKNLKPI : SODM_NICPL
SODM_NICPL     : TFSLPDLPYDYGALEP.ISGDIMQLHHQNHHQTYVTNYNKALEQDAISKGDAPTVAKHS..AIKFNGGGHINHSIFWKNLAPV : FCU56108
FCU56108       : ........................LHHKKHHQTYVNSLNAAEQAKAATPKER...IAQA..ALKFNGGGHINHSLFWENLAPS : SODF_METTH
SODF_METTH     : FYELPELPYPYDALEP.ISREQLTIHHQKHHQAYVDGANALLRKEARESDTDVDIKALK..ELSFHVGGYVLHLFFWGNMGPA : SODM_CAEEL
SODM_CAEEL     : KHSLPDLPYDYADLEP.ISHEIMQLHHQKHHATYVNNLNQIEEKEAVSKGNVKEAIAQP..ALKFNGGGHINHSIFWTNLAKD : CPSUPOXID
CPSUPOXID      : GFKLKPLDYPYDALEP.IDAETVKIHHDKHQQAYVDKLNKALEK.ELYGKSLYDILSLDMADLVNQGGGVYNHEFYWSILGKG : SODM_THEAQ
SODM_THEAQ     : PFKLPELGYPYEALEP.IDARTMEIHHQKHHGAYVTNLNAALEK.YLQGAEVETLLRLTQAAVRNNGGGHLNHSLFWRLLTPG : SODM_LISMO
SODM_LISMO     : TYELPKLPYTYDALEP.FDKETMEIHYTKHHNTYVTKLNEAVAG.ELASKSAEELVTLDRGAVRNHGGGHANHTLFWSILSPN : SODF_CAMCO
SODF_CAMCO     : MFELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKYTEFASKDLVSIIKSSSGGVFNNAAQVYNHDFYFDCIKP. : TCU39401
TCU39401       : VFSIPPLPWGYDGLAAKLSKQQVTLHYDKHHQGYVTKLNAAAQTSALATKSIEEIIREK.GPIFNLAAQIFNHTFYWESMCPN : SODF_PORGI
SODF_PORGI     : THELISLPYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLIIGTEFENADLNTIVQS.EGGIFNNAGQTLNHNLYFTQFRPG : SODM_BACCA
SODM_BACCA     : PFELPALPYPYDALEP.IDKETMNIHHTKHHNTYVTNLNAALEG.DLQNKSLEELLSLERTAVRNNGGGHANHSLFWTILSPN : PSU30841
PSU30841       : VFTLPDLAYDYGALEP.ISGEIMQIHHQKHHQTYITNYNKALEQDAVAKADTSTTVKQN..AIKFNGGGHINHSIFWKNLAPV : SODF_BACFR
SODF_BACFR     : TYEMPKLPYANNALEPVISQQTIDYHYGKHLQTYVNNLNSLVPGTEYEGKTVEAIVAAPDGAIFNNAGQVLNHTLYFLQFAPK : HPSODB
HPSODB         : MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDFEKSSLFDILTKSSGGVFNNAAQIYNHDFYWDCLSP. : SODF_SULAC
SODF_SULAC     : RYEFPQLPYKVDALEP.ISKDIIDVHYNGHHKGYVNGANSLLDRKLIKGDLPQGQYDQGLRGLTFNINGHKLHAIYWNNMAPA : SODM_PROFR
SODM_PROFR     : VYTLPELPYDYSALEP.ISGEIMELHHDKHHKAYVDGANTALDKEARDKADFGAINKEK..DLAFNLAGHVNHSVFWKNMAPK : CPAMNSOD
CPAMNSOD       : DATLPDLPYDYAPWS..ISGEIMQLHHQKHHQAYVTNYNKALEQEAISKGDASAAVKQS..AIKFNGGGHINHSIFWKNLAPT : SODM_HEVBR
SODM_HEVBR     : TFSLPDLPYDYGALEP.ISGEIMQLHHQKHHQTYITNYNKALEQDAIEKGDSAAVVKQS..AIKFNGGGHVNHSIFWKNLAPV : SODM_PALVU
SODM_PALVU     : .................ISEMIMQIHHTKHHQAYINNLKACTEKQAEQANDVAAMNALP..AIKFNGGGHINHTIFWTNMAPS : SODM_ONCVO
SODM_ONCVO     : KHVLPDLPYDYGALEP.LSAEIMQVHHGKHHAAYVNALNQAEEKEALAKGDTQAAVATK..LMNFNTGGHINHTLFWEGLTAV : SODM_DROME
SODM_DROME     : KHTLPKLPYDYAALEP.ICREIMELHHQKHHQTYVNNLNAAEEQEAKSKSDTTKLIQAP..ALRFNGGGHINHTIFWQNLSPN : SODM_PETMA
SODM_PETMA     : .................ISANIMQLHHSKHHATYVNNLNVAEQKEAVAKGDVTAEIAQP..AIKFNGGGHINHSIFWTNLSPN : SODM_EPTST
SODM_EPTST     : .................ISAEIMQLHHSKHHAAYVNNVNVVEEKEALGKGDVNTQVSQP..AFRFNGGGHINHSIFWRNLSPS : SODM_BRAFL
SODM_BRAFL     : .................ISAEIMQVHHQKHHATYVNNLNAAEEQEAIHKQDVTKMIAQS..AIKFNGGGHINHSIFWNNLCPS : SODM_PARCL
SODM_PARCL     : .................IIGDIMELHHKKHHATYTNNLNAAEEKAAHAEGDIGGMIAQP..ALKFNGGGFINHCIFWTNLSPQ : JC4611
JC4611         : ALELKSPPYALDALEPHMSKQTLEFHWGKHHRAYVDNMNKQVAGTPLDGKSLEEIVLSWPTPVFNNAAQVWNHTFFWESMKPN : SODF_SOYBN
SODF_SOYBN     : KFELKPPPYPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQVVGTELDGKSLEEIIVSYILPAFNNAAQVWNHDFFWECMKPG : ACRBDOXN2
ACRBDOXN2      : EFKQAPLPYATNALQP.IDQQTMEIHYGKHHKAYVDNLNAQIKT.ELDKTDLIQLQKISNTAVRNNGGGHFNHTFFWESLAAT : CRU24500
CRU24500       : AQALPPLPYDYGSLEP.VDATTMNIHHTKHHQTYVNNLNAALDK.ELKDLGLVDLNKVGATVIRNNGGGHYNHSFFWKVMTNP : PPU64799
PPU64799       : PHTLPALPYAYDALEP.IDAQTMEIHHTKHHQTYVNGLNAAIEG.W.AEWPVEKLVGVKRGAVTNHGGGHANHSLFWTVMSPQ : SODM_BORPE
SODM_BORPE     : PYVLPALSYAYDALEP.IDARTMEIHHTRHHQTYVNGLNAALEG.LDSEEPVEQLLRIPHGAVRNHGGGHANHSLLWTVMSPS : TCU90722
TCU90722       : PAELPKLGFNWKDGCAPFSPRQMELHYTKHHKAYVDKLNALAGT.TYDGKSIEEIILVAKKGLFNQAAQHFNHTFYFRCITPN : TFU66073
TFU66073       : MFSIAPIPYMETGISG.LTKHAVEIHVTKHHQAYVDFANKNVPGTEFEGKPIEEIIQAT.GPLFNNVAQHFNHAFFWNCLTAK : TFU66074
TFU66074       : MFSIEPVSFLESGLPN.LTPHAVQIHVTKHHQGYVDMANKIVPESEFKGKSVEEIIQAS.GPVFNNVAQHFNHSFFWKCLTAT : SODF_PLEBO
SODF_PLEBO     : AFTQPPLPFPKDALEPYMKAETFDYHYGKHHAAYVTNLNKLVEGTPMESLSLEDVIKSFKVGVFNNAAQVWNHTFFWNCLKAG : SODF_COXBU
SODF_COXBU     : AFELPDLPYKLNALEPHISQETLEYHHGKHHRAYVNKLNKLIEGTPFEKEPLEEIIRKSDGGIFNNAAQHWNHTFYWHCMSPD : SODF_BORPE
SODF_BORPE     : AHTLPPLPYALDALAPRISKETLEFHYGKHHQTYVTNLNNLVPGTEFENLSLEEIVKKSSGGVFNNAAQVWNHTFYWNSLSPN : SODF_LEGPN
SODF_LEGPN     : TFTLPQLPYALDALAPHVSKETLEYHYGKHHNTYVTNLNKLIPGTEFESMTLEEIIMKAKGGIFNNAAQVWNHTFYWHSMSPN : SODF_ENTHI
SODF_ENTHI     : SFQLPQLPYAYNALEPHISKETLEFHHDKHHATYVNKLNGLVKGTEQEHKTLEELIKKPTQAIYNNAAQAWNHAFYWKCMCG. : S55499
S55499         : VITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAEKSLLDIVKESSGAIFNNAAQIWNHTFYWDSMGPD : SODF_TETPY
SODF_TETPY     : ......LNYEYSDLEP.LSAHLLSFHHGKHHQAYVNNLNATYEQAATKENDAHKIATQS..ALRFNLGGHVNHWIYWDNLAPV : SFU53561
SFU53561       : QYTLPPLPYPYDALQP.ISQQIMELHHKKHHQTYVNGLNAALEAKAAEATDVPKLVSQQ..AIKFNGGGHINHSLFWKNLAPE : S54793
S54793         : .................IDQRTMEFHHDKHHNTYVTKLNATVEG.LEHQS.LADMIALDRMSVRNNGGGHFNHSLFWEILSPN : SODM_LACLA
SODM_LACLA     : AFTLPELPYAPNALEP.FDEATMRLHHGKHHQTYVNNLNAAIEK.ELDDLSLEELLTLSRTAVRNNGGGHLNHSQFWLWLRPN : PN0615
PN0615         : AYELPQLPYAYDALEP.IDAKTXEIHHSKHHNTYVTNLNAAVEG.F.ADKDINDLIALDQTAVRNNGGGHANHTLFWEVIAPG : SOD2_PLEBO
SOD2_PLEBO     : AFELKPLPYAYDALEP.IDATTMQLHHDKHHAAYVNNLNAAIEK.DLQSMSVEDLVTLDRTTVRNNAGGHVNHTMFWEIMGAN : BSU31572
BSU31572       : PFKIDPLTYPTNALEP.IDAKTMEIHHDRHHQAYVTNLNNFAKD.QIAEKPVVEVLALGRTGVRNNMGGHANHTMFWQIMGPN : SOD3_PLEBO
SOD3_PLEBO     : PAQLPPLPYDAGALSK.IDAETMRIHHDRHHQTYVDNLNTALKD.NLQNLSIEAMLRLNRNTIRNNAGGHLNHTIFWQIMSPD : COPP_YEAST

               : 1---------11--------21--------31--------41--------51--------61--------71--------81- :
OrigSeq        : SFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPN :OrigSeq
cons           : -----------------HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHH---E--------HHHH--H----- :cons
dsc            : ------------HH---HHHHHHHHHHHHHHHHHHHHHHHHHHH---HH--HHHHHHHH--HHHHH---HHHHHHHHHH---- :dsc
mul            : -------------H----HHHHHHHHH-----E------HHHHH-HHHH--HHHHHHH-----------------HHH----- :mul
nnssp          : -------------------HHHHHHH-----HHHHHHHHHHHH--------HHHHHHH------------------------- :nnssp
phd            : -----------------HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHH---E--------HHHE--E----- :phd
pred           : -------------------HHHHHHHH--------HHHHHHHHHHHHHH-HHHHHHHHHH------------HHHHHHH---- :pred
zpred          : -----------------HHHHHHHHHHHH--EEEEE---HHHHHHHHHHHHHHHHHHH----EE-------EEEEEEE----- :zpred

access : EEEBEEBE-BBEBBEE-BEEEBBEB-BBEEBEBBBEBBEEBBEEEE-EEEEBEEBBEBBEBBBBBEBBEBBBBBBBBEBB-EE : access PHD Rel : 97767876521113012146776778756578999977786512112354378998631021113466432121201013899 : PHD Rel Pred Rel : 00099999999880777778886666766660555678878777858677788777886786566099896765557779000 : Predator Rel

dssp : -------------------HHHHHHH---HHHHHHHHHHHHH---HHHH--HHHHHHH--HHHHHHHHHHHHHHHHHH-E--- :dssp define : ------------------HHHHHHHHH-HHHHHHHHHHHHHHH-------HHHHHHHHH-HHHHHHHHHHHHHHHHHHHH--- :define stride : -------------------HHHHHHHHHHHHHHHHHHHHHHH---HHHH--HHHHHH---HHHHHHHHHHHHHHHHHHHE--- :stride
Q3 values for 1isab-1-GJB View SS in Rasmol dssp define stride phd 67.47 75.90 68.67 dsc 78.31 84.34 81.93 pred 67.47 66.27 66.27 mul 62.65 56.63 59.04 nnssp 68.67 67.47 62.65 zpred 53.01 51.81 54.22 cons 69.88 78.31 71.08