Results for 1isab-2-GJB


1isab-2-GJB    : AGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA : SODM_HALMA
SODM_HALMA     : .GGEPEGELLDRIEEDFGSYEGWKGEFEAAASAAGG..WALLVYDPCAKLRNVPVDKHDQGALWGSHPILALDVWEHSYYYDYGPARGDFIDAFFEVVDWDKAAEEYEK : SODF_MYCTU
SODF_MYCTU     : .GDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNLLIFQVYDHQTNFPLGIVPLLLLDMWEHAFYLQYKNVKVDFAKAFWNVVNWADVQSRYAA : SODM_PIG
SODM_PIG       : .GGEPKG.LLEAIKRDFGSFEKFKEKLTAVSVGVQGSGWGWLGFNKEQ.LQIAACSNQDP.LQGTLVPLLGIDV................................... : SODF_NICPL
SODF_NICPL     : GGGEPSGELLELINRDFGSYDAFVKEFKAAAATQFGSGWAWLAYKP..KLALVKTPNAENPLVLGYTPLLTIDVWEHAYYLDFQNRRPDYISIFMKLVSWEAVSSRLKA : GLU56119
GLU56119       : GTIKDGP.LKSAIEQSFGSVDVFIKEFNATTASXQGSGWGWLGLNPAT.LEITTTANQDP....LHVPIMGVDIWEHAF.............................. : I40858
I40858         : .GGEPTGELAEAIDRDFGSFEKFKAHFSAAALGLQGSGWAVLGYDHIAGLLVEQLTDQQGNTSVNFTPLLMLDMWEHAFYLQYKNVKPDYVKAVWNVVNWDD....... : S39871
S39871         : .LQG...ALKDAIERDFGSVDAFKAEFEKAAATRFGSGWAWLVLTA..GLAVVSTANQDNKEVAGGFPLLGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDFVAERFEQ : HALSOD
HALSOD         : .GGEPSGALADRIAADFGSYENWRAEFEVAAGAASG..WALLVYDPVAKLRNVAVDNHDEGALWGSHPILALDVWEHSYYYDYGPDRGTFVDAFFEVIDWDPIAANYDD : A42710
A42710         : ..TKVTAEVAAAINEAFGSFDDFKAAFTAAATTRFGSGWAWLVVDK..GLEVTSTANQDTPISQGLKPILALDVWEHAYYLNYRNVRPNYIKAFFEVINWNTVARLYAE : SODM_BACSU
SODM_BACSU     : .GEP.TGALAEEINSVFGSFDKFKEQFAAAAAGRFGSGWAWLVVN...GLEITSTPNQDSPLSEGKTPILGLDVWEHAYYLNYQNRRPDYISAFWNVVNWDEVARLYSD : SODF_SYNP7
SODF_SYNP7     : GGGAPTGALADKIAADFGSFENFVTEFKQAAATQFGSGWAWLVLDN..GLKITKTGNADTPIAHGQTPLLTIDVWEHAYYLDYQNRRPDYISTFVKLANWDFASANYAA : S55499
S55499         : CGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPIKDNGIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKK : SODM_HEVBR
SODM_HEVBR     : EGGGELPSLGWAIDADFGSLEKLIQLMNAEGAALQGSGWVWLALDKEL.LVVETTANQDP.VTKGLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNWKYASEVYAK : PPU64799
PPU64799       : .GEP.HGQLAQAIASQLGGFDAFKEAFTKAALTRFGSGWAWLSVTP..KLVVESSGNQDSPLMFGNTPIFGLDVWEHAYYLKYQNRRPEYIGAFYNVIDWAEVERRYLE : GMU59811
GMU59811       : ......................FKKQMNGTTAGIQGSGWGWLGYSPET.LEIVTTAXQDP....LHVPIIGIDIWEHAFYLQYYNVKADYLAAIWNVINFKEAERRLIE : SODF_PHOLE
SODF_PHOLE     : AGGEPTGEVAAAIEKAFGSFAEFKAKFTDSAINNFGSSWTWLVKNANGSLAIVNTSNAGCPITEEVTPLLTVDLWEHAYYIDYRNLRPSYMDGFWALVNWDFVSKNLA. : SODF_PSEAE
SODF_PSEAE     : GGGQPTGGLADAINAGFGSFDKFKEEFTKTSVGHLRFRSGWLVKKPDGSLALASTIGAGNPLTSGDTPLLTCDVWEHAYYIDYRTAS.EVRRAFWNLVNWDFVAKNFA. : SODM_XANCP
SODM_XANCP     : .GEP.KGEVAKAIDKDIGGFEKFKEAFTKAAVSRFGSGWAWLSVTP..KLVVESTANQDSPLFEGNTPILGLDVWEHAYYLKYQNRRPEYIGAFYNAVNWEEVERRYHA : MXDNASOD
MXDNASOD       : .GDKPTGELAAAIDDAFGSFDKFRAQFTAAATTVQGSGWAALGWDSLGGLLVFQVYDHQSNFPLGIVPLLVLDMWEHAFYLQYKNVKA..................... : TFU66074
TFU66074       : TTQEVPAAVASFLSKHFESVDNFKAQFVQKASTVFGSGWCYLAVNKDG.VSINQYSNALNPVKDGGVPLLCVDTWEHAWYIDYENRKAEYFNKFWGVVNWNFVEENLKK : SODM_MYCPH
SODM_MYCPH     : .GDKPTGDLAAAIDDQFGSFDNFRAQFTAAANGLQGSGWAVLGYDTLGDLLTFQLYDQQANVPLGIIPLLLVDMWEHA............................... : RICRMSOA
RICRMSOA       : EGGGEPPKLGWAIDEDFGSFEALVKKMSAEGAALQGSGWVWLALDKEA.LSVETTANQDP.VTKGLVPLLGIDVWEHAYYLQYKNVRPDYLSNIWKVMNWKYAGEVYEN : SODN_CAEEL
SODN_CAEEL     : .GGEPSK.LMDTIKRDFGSLDNLQKRLSDITIAVQGSGWGWLGYCKKD.LKIATCANQ....DPLMVPLFGIDVWEHAYYLQYKNVRPDYVHAIWKIANWKNISERFAN : SODM_YEREN
SODM_YEREN     : .LTG...DLKAAIERDFGSVDSFKEKFEAAAATRFGSGWAWLVLKD..GLAVVSTANQDSEAVSGGFPIVGLDVWEHAYYLKFQNRRPDYIKAFWNVVNWDEAAARFAQ : SODM_CAVPO
SODM_CAVPO     : .GGEPKG.LLEAIKRDFGSFDKFKEKLTAVSVGVQGSGWGWLGFNKER.LQIAACSNQDP.LQGTLIPLLGIDVWEHAYYLQLKNVRPDYLKAIWKVIKN......... : SODM_THEAQ
SODM_THEAQ     : .KEP.VGELKKAIDEQFGGFAALKEKLTQAAMGRFGSGWAWLVKDP..GLHVISTANQDNPVMGGFAPIVGIDVWEHAYYLKYQNRRADYLQAIWNVLNWDVAEEIYKG : SODF_METTH
SODF_METTH     : CGGEPSGKLAEYIEKDFGSFERFRKEFSQAAISAEGSGWAVLTYCQRTDLFIMQVEKHNVNVIPHFRILLVLDVWEHAYYIDYRNVRPDYVEAFWNIVNWKEVEKRFED : TCU39401
TCU39401       : GGGEPTGKVADEINASFGSFAKFKEEFTNVAVGHFGSGLAWLVKDTNSKLKVYQTHDAGCPLTEPLKPLLTCDVWEHAYYVDYKNDRAAYVQTFWNVVNWKNVERQ... : SODM_LISMO
SODM_LISMO     : .GAP.TGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVN...GLEIVSTANQDSPLSDGKTPVLGLDVWEHAYYLKFQNRRPEYIETFWNVINWDEANKRFDA : SODF_CAMCO
SODF_CAMCO     : SCQSMDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLVYNTKNKLEFVGTSNAATPITEDKVPLLVVDVWEHAYYVDHRNARPAYLEKFYAHINWEFVAKAYEW : IPBMNSUPDI
IPBMNSUPDI     : ......PSFGWEIDNHFGSLDALIQKMSAEGAAVQGSGWVWLGLDKEL.LVVETTPNQDP.VTKNKVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVVNWKYACEVYQQ : BNRSOD2
BNRSOD2        : ..NEPAGKLGEAIKRDFGSFENFKKEFNAASVGLFGSGWAWLSVDKDG.LHITKEPNGSNPVRAGLKPLLGFDVWEHAYYLDYQNLRADHVNKLWEIIDWDVVEKR... : SODF_HELPY
SODF_HELPY     : KATALSDELKGALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDTKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGHINWHFVSQCYEW : SODF_PORGI
SODF_PORGI     : ..GAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDANG.LSIEKEPNAGNPVRKGLNPLLGFDVWEHAYYLTYQNRRADHLKDLWSIVDWDIVESR... : SODF_PLEBO
SODF_PLEBO     : GGGAPTGELAAKIDAAFGSLDKFKEEFSNAAATQFGSGWAWLVDDG..GLKVTKTPNAENPLVHGQKPLLTLDVWEHAYYLDFQNARPAFIKNFLNLVNWDFVAQNLA. : JC4611
JC4611         : GGGAPTGALAEAITRDFGSLDKFKEEFKQAGMTQFGSGWAWLNADK..GLSISKSPNAVNPVVEGKTPILTVDVWEHAYYIDVQNRRPDYITTFMKLINWDAVAQRYAR : SODF_SOYBN
SODF_SOYBN     : GGGKPSGELLELIERDFGSFVKFLDEFKAAAATQFGSGWAWLAYRARKNLVVLKSPNAVNPLVWGYYPLLTIDVWEHAYYLDFQNRRPDYISVFMKLVSWDAVSSRLEQ : SODF_ENTHI
SODF_ENTHI     : CGVKPSEQLIAKLTAAFGGLEEFKKKFTEKAVGHFGSGWCWLVEHDGK.LEIIDTHDAVNPMTN.MKPLLTCDVWEHAYYIDTRNNRAAYLEHWWNVVNWKFVEEQ... : SODF_BORPE
SODF_BORPE     : GGGEPSGALADAIKAKWGSVDAFKEAFNKSAAGNFGSGWTWLVKKADGTLDIVNTSNAATPLTTADKALLTCDVWEHAYYIDYRNARPKYLENFWALVNWEFAAKNF.. : SODF_LEGPN
SODF_LEGPN     : GGGEPKGRLAEAINKSFGSFAAFKEQFSQTAATTFGSGWAWLVQDQSGALKIINTSNAGTPMTEGLNALLTCDVWEHAYYIDYRNRRPDYIEAFWSLVNWDFASSNL.. : SODF_COXBU
SODF_COXBU     : GGGDPSGELASAIDKTFGSLEKFKALFTDSANNHFGSGWAWLVKDNNGKLEVLSTVNARNPMTEGKKPLMTCDVWEHAYYIDTRNDRPKYVNNFWQVVNWDFVMKNFK. : SODF_SULAC
SODF_SULAC     : GGGKPGGALADLINKQYGSFDRFKQVFSESANSLPGSGWTVLYYDNESGLQIMTVENHFMNHIAELPVILIVDEFEHAYYLQYKNKRGDYLNAWWNVVNWDDAEKRLQK : SODF_TETPY
SODF_TETPY     : SGGGVLPPLTKAIKEKWGSYENFITLFNTRTAAIQGSGWGWLGYDTVS.LRLFELGNQD..MPEWIVPLLTIDVWEHAYYLDYQNLRPKYLTEVWKIVNWREVEKRYLQ : SODM_ONCVO
SODM_ONCVO     : .SGEPNS.LMTAIKKDFGSLETMIDKLNAKTIAIQGSGWGWLAYDKEM.LQLACCPNQDL.LEPTLIPLFCIDVWEHAYYLQYKNLRPDFVKAIWKIANWKIISDRYIK : SODM_DROME
SODM_DROME     : .KTQPSD.LKKAIESQWKSLEEFKKELTTLTVAVQGSGWGWLGFNKKS.LQLAALPNQDP.LEASLIPLFGIDVWEHAYYLQYKNVRPSYVEAIWDIANWDDISCRFQE : SODM_YEAST
SODM_YEAST     : GGEPPTGALAKAIDEQFGSLDELIKLTNTKLAGVQGSGWAFIVKNLSN.LDVVQTYNQDT...VTLVPLVAIDAWEHAYYLQYQNKKADYFKAIWNVVNWKEASRRFDA : SFU53561
SFU53561       : GKIDQAP.LKAAIEQRWGSFDKFKDAFNTTLLGIQGSGWGWLVTDGPK.LDITTTHDQDP....VAAPVFGVDMWEHAYYLQYLNDKASYAKGIWNVINWAEAENRYIA : BSU31572
BSU31572       : .GKA.DGEVLAAIDRDLGGMEKFQTDFNAAGGRVFGSGWVFVTVTK..GLAIETRPNQDNPIMDGKRALLGNDVWEHAYYLTYQNRRPDYLKAWWNTVNWKAVAERYAA : SOD1_PLEBO
SOD1_PLEBO     : .GTP.TGAVAKAIDQTFGSFDAFKQQFNKAGADRFGSGWAWLVSDR..GLSITSTANQDNPLMSNAYPILGNDVWEHAYYLKYQNRRAEYLTNWWNVVNWQAVNQRYAQ : SOD2_PLEBO
SOD2_PLEBO     : .GAP.TGAISEAINNSFGSFDAFKQQFNDAGTKRFGSGWVWLVRSQ..GLQILSTPNQDSPLIEGHTPIMGNDVWEHAYYLKYQNRRPEYLNAWWNVLNWEEINRRFDA : SOD3_PLEBO
SOD3_PLEBO     : .GQP.TGAIAQAINQTFGNFESFRKQFNEAGGDRFGSGWVWLVRNA..GLQIVSTANQDNPIMEGNYPIMGNDVWEHAYYLRYQNRRADYLNNWWNVVNWNEINRRFQA : SODM_LACLA
SODM_LACLA     : .ENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVVDE..GLKVVSTANQDNPISEGLTPVLGLDVWEHAYYLKYHNVRPDYIEAFFNLVNWDKVNELYAK : SODM_BORPE
SODM_BORPE     : .GRP.DGRLAADIQAQLGGHDAFQAAFTQAALGRFGSGWAWLTVTP..GLRVDSSANQDSPLMEGNTPILGLDVWEHAYYLQYQNRRPEYIEAFYRVVDWAEVARRYEI : CRU24500
CRU24500       : .TNGPNGDVKAAIEASFGSVDEMKAKFNAAAAGRFGSGWAWLSVKP..GLSIDSTPNQDNALPDVGIPLLGLDVWEHAYYLKYQNRRPEYIAAWWNVVNWEQVAENYKA : ACRBDOXN2
ACRBDOXN2      : .TGQPSPALVKQITQDFGSLDAFKQKFNEAASGRFGSGWAWLIVTP..GLAVTSTPNQDNLSET.GTPLLGLDVWEHAYYLKYQNRRADYIKAFWSVVNWNKVNERYNE : SODM_PROFR
SODM_PROFR     : APERPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKINTLQFYDHQNNLPAGSIPLLQLDMWEHAFYLQYKNVKGDYVKSWWNVVNWDDVALRFSE : I39745
I39745         : .GGQPEGELAEAIKDSFGSFEKFQAQFTATALGIQGSGWAVLAYDSISGLLIFQLFDQQANVPVGTTPLFMVDMWEHAFYLDYLNVKADYVKAIWNVVNWDD....... : TCU90722
TCU90722       : NGKAMPKSLESAVTAQFGSVEQFKDAFVQAGVNNFGSGWTWLCVDPSNNLVIDNTSNAGCPLTEGLRPVLAVDVWEHAYYKDFETA.........GRI........... : CPSUPOXID
CPSUPOXID      : ...RPVAEIADAYDRDFGSFEEFKEKFKQCGISTFGSGWAWLVSDK..GLEIMSTKDQSSPISLGLIPILTMDVWEHAYYLKYQNRRPEYIDYFFDIINWKKCEEYYNN : PN0614
PN0614         : .GEP.TGELAEEIKSTFGSFDQFKEKFAAAAAGRFGSGWAWLVVN...GLEITSTPNQDSPLSEGKTPVLGLDVWEHAYY............................. : PN0615
PN0615         : .NTP.VGEVAKAIDAKFGSFDAFKEEFAKAATTRFGSGWAWLIVD...DVAVTSTPNQDSPVMEGKTPVLGLDVWEHAY.............................. : SODM_PALVU
SODM_PALVU     : .GGEPAG.VADAITKEFGSFQAFKDKFSTASVGVKGSGWGWLGYCPKN.LAVATCQNQDP.LQLTLIPLLGLDV................................... : SODM_PETMA
SODM_PETMA     : .GGAPTG.LQKAIETDFGSFTKLQEKMSAVSVAVQGSGWGWLGYDKET.LRIAACANQDP.LQATLIPLLGIDV................................... : SODM_BRAFL
SODM_BRAFL     : .GGEPTG.LAEAITRDFGSFEAFKEKMTAATVAVQGSGWGWLGLDPTS.LRIVACPNQDP.LEGTLKPLLGIDV................................... : SODM_PARCL
SODM_PARCL     : .GGVPEG.LADAINRDFGSFDSFKTTLTAATVAIQGSGWGWLGFDPKT.LKIATCVNQDP.LQATMVPLFGIDV................................... : THU72871
THU72871       : GGGEPEGNVQTAINQDFGSFENLKKQTNAALAGIQGSGWAWIVKDKAS.LTFVTRANQDP...VTFEPLLGIDVWEHAYY............................. : THU72870
THU72870       : ADADPASTLTAEIDKTWGSLDGFKEAMGKALLGLQRSGWGWFGQRRQ..LANCYYKGPDP.VVWRRVPILVIDVWEHAYY............................. : SOD3_PLEBO

               : 84--------94--------104-------114-------124-------134-------144-------154-------164-------174-------184------ :
OrigSeq        : AGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA :OrigSeq
cons           : ------HHHHHHHHHHH--HHHHHHHHHHHHHHH----EEEEEE-----EEEEEE-------------E-----HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH-- :cons
dsc            : -------HHHHHHHHHHHHHHHHHHHHHHHHHHH----EEEE-------EEEEE-----------------HHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHH--- :dsc
mul            : -------HHHHHHHH-H-HHHHHHHHHHHH----------EEE------EEEEE--------------EEHHHHHHHHEEE---------HHHHHHH------------ :mul
nnssp          : ------HHHHHHHHHHH--HHHHHHHHHHHHHHH-----EEEE------EEEEE--------------EE------------------HHHHHHHHHH-HHHHHHHHHH :nnssp
phd            : ------HHHHHHHHHHH--HHHHHHHHHHHHHHHH---EEEEEE-----EEEEEE-------------E-----HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH-- :phd
pred           : ------HHHHHHHHHH---HHHHHHHHHHHHHH------EEEEE-----EEEEEE----------------------HHHHHH----HHHHHHHHHH---HHHHHH--- :pred
zpred          : -------HHHHHHHH----HHHHHHHHHHHHHE------EEEE------EEEEE-----------EEEEEEHHHHHHH------------------------------- :zpred

access : EEEEEEEEBBEBBEEEBEBBEEBEEEBEEBBBBBEBEBBBBBBBEEEEEBBBBBB-EEE-EBEEBBBBBBBBEBBEBBBBBEBEE--EEBBEBBBEBBBBE-BBEE-EE : access PHD Rel : 9999842799999995372599999999996433155227899827885699863378996543767420244179999998641148999999998745899986259 : PHD Rel Pred Rel : 0090006788899766099897999999888566899966898099876598868999999889998866677786087777779976677888858567877777000 : Predator Rel

dssp : ------HHHHHHHHHHH--HHHHHHHHHHHHHH----EEEEEEE-----EEEEEEE----HHH---EEEEEEE--HHH-HHHH---HHHHHHHHHHHE-HHHHHHHHH- :dssp define : EEEE--HHHHHHHHHHH-HHHHHHHHHHHHHHHH------EEEE----EEEEEEE---------EEEEE-EEEE-------EEEEHHHHHHHHHHHH-HHHHHHHHHHH :define stride : ------HHHHHHHHHHH--HHHHHHHHHHHHHH----EEEEEEE-----EEEEEEE----HHH---EEEEEEE--HHHHHHHH---HHHHHHHHHH-E-HHHHHHHHH- :stride
Q3 values for 1isab-2-GJB View SS in Rasmol dssp define stride phd 80.73 69.72 80.73 dsc 72.48 63.30 72.48 pred 79.82 69.72 79.82 mul 62.39 55.05 61.47 nnssp 77.06 75.23 75.23 zpred 61.47 54.13 61.47 cons 82.57 70.64 82.57