Results for 1jud-1-GJB


1jud-1-GJB    : YIKGIYFDLYGTLFDVHSVVGRCDEYFPGRGREISYLWRQKQLEYTWLRSLMNRYVNFQQYTEDYLRFTCRHLGLDLDYRTRSTLCDYYLRLYPFSEVPDSLRELKRRGLKLYILSNGSPQSIDYVVSHYGLRDGFDHLLSVDPVQVYKPDNRVYELYEQYLGLDRSYILFVSSNYWDYTGYRYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRYVVELF : A44830
A44830        : NIQGIVFDLYGTLYDVHSVVQACEEVYPGQGDAISRLWRQKQLEYTWLRSLMGRYVNFEKATEDALRFTCTHLGLSLDDETHQRLSDAYLHLTPYADTADAVRRLKAAGLPLGIISNGSHCSIEQVVTNSEMNWAFDQLISVEDVQVFKPDSRVYSLAEKRMGFPKENILFVSSNAWDASAASNFGFPVCWINRQNGAFDELDAKPTHVVRNLAEMSNWL : XAADHLB
XAADHLB       : MIKAVVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWGVTREALAYTLGTLGLEPDESFLAGMAQAYNRLTPYPDAAQCLAELAP..LKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLRMREETYAEAPDFVVPALGDLPRLV : DEH2_MORSP
DEH2_MORSP    : KIEAIAFDMYGTLYDVHSVVDACEKQYPGKGKDISVLWRQKQLEYAWLRCLMGQYIKFEEATANALTYTCNQMKLDCDEGSAMRLTEEYLRLKPFPEVRGALRALRQRGMRLAILSNGSTETIHDVVHNSGVEGEFEHLISVDSARAYKPHPLAYELGEEAFGISRESILFVSSNPWDVSGAKAFGYQVCWINRYGFAFDELGQTPDFTVPVMDAIVHLI : HAD2_PSESP
HAD2_PSESP    : EIRGVVFDLYGTLCDVHSVAQLCGQYFPERGTEISLMWRQKQLEYSWLRSLMGQYVSFPQATEDALVFVCNALNLKLREDTRIALCNEYLNIKPYREVRSALESLRSGAVPLAILSNGSAHSIQSVVGNAGIEHFFSHLISADEVSVSKPSPAAYELAEKRLKVVRSKLLFVSSNAWDASGARHFGFQVCWVNRSRNTFEQLGERPDHVISGLDELPNLL : JC2075
JC2075        : PIEGIVFDLYGTLYDVHSVVQACESAYPGQGEAISRLWRQKQLEYTWLSSLMGRYASFEQRTEEALRYTCKHLGLATDETTLRQLGQAYLHLAPHPDTTAALRRLKASGLPMAIASNGSHHSIEQVVSHSDMGWAFDHLISVETVKVFKPDNRVYSLAEQTMAIPRDRLLFVSSNSWDATGARHFGFPVCWVNRQGAVFDELGATPTREVRDLGEMSDWL : S29096
S29096        : SLRACVFDAYGTLLDVHSAVMRNADEVGASAEALSMLWRQRQLEYSWTRTLMHQYADFWQLTDEALTFALRTYHLEDRKGLKDRLMSAYKELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKGSKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPLL : HAD1_PSESP
HAD1_PSESP    : PIRACVFDAYGTLLDVNTAVMKHAHDIGGCAEELSSLWRQRQLEYSWTRTLMGRYADFWQLTTEALDFALESFGLLERTDLKNRLLDAYHELSAYPDAVGTLGALKAAGFTTAILSNGNNEMLRGALRAGNLTEALDQCISVDEIKIYKPDPRVYQFACDRLDVRPSEVCFVSSNAWDIGGAGAFGFNTVRINRINKPQEYSFAPQRHQLSSLSELPQLL : F69125
F69125        : MLKAVFFDIDDTLYDTSGFAKLARKAALNVMIDAGLPLTQEEA.YKLLREIISEKGSNYDRHFNVLTKTVFEKPLLIALGMITYHNVKFALLRPFPNTTSTLIDLKSKGYRLGVISNGITIKWEKLIR.LGIHHFFDEVVTSDEVGFEKPNIRIFEEALRRMGCKPERSVMVGNKFEDILGATNAGMSAILVNSETEAERDHVEKNGLDVTVIDDISQLK : G70044
G70044        : QVTTILFDLDGTL......INTNELIIASFLHTLEHYYPSK.....YKREDVLAFIG..PSLFDTFSSMDPDKCEDMIAMYRAYNHDMHDSLVTYETVYETLDALKKAGFTLGIVTTKLRDTVNMGLKLTGIGEFFETVVTLDDVTNAKPDPEPVLLALKQLGSEPAEAIMVGDNYHDVLAGKNAGTKTAGVAWTKGPEMLAKHEPDFMLEKMSDLLQIV : MTV00431
MTV00431      : SISAVVFDRDGVLFDWTRAEEDVRRITGLPLEEIERRWG......GWLNGLTIDDAFVETQPISEFLSSLARELELGSKARDELVRLDYMAFAQYPDARPALEEARRRGLKVGVLTNNSLLVARSLLQCAALHDLVDVVLSSQMIGAAKPDPRAYQAIAEALGVSTTSCLFFDDIADWVEGARCAGMRAYLVDRS.....GQ..TRDGVVRDLSSLGAIL : YRFG_ECOLI
YRFG_ECOLI    : PCRANCFTLEISLINIAWQVDTVLLDMDGTLLAFDNYFWQKLVPETWGAKVTPQEAMEYRQQYHDVQHTLNYCLDYWSEQLGLDICAMTTEMGPREDTIPFLEALKASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAEATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTN..PDSGIAEKQYQRHPSLNDYRRLI : S55499

              : 3---------13--------23--------33--------43--------53--------63--------73--------83--------93--------103-------113-------123-------133-------143-------153-------163-------173-------183-------193-------203-------213------- :
OrigSeq       : YIKGIYFDLYGTLFDVHSVVGRCDEYFPGRGREISYLWRQKQLEYTWLRSLMNRYVNFQQYTEDYLRFTCRHLGLDLDYRTRSTLCDYYLRLYPFSEVPDSLRELKRRGLKLYILSNGSPQSIDYVVSHYGLRDGFDHLLSVDPVQVYKPDNRVYELYEQYLGLDRSYILFVSSNYWDYTGYRYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRYVVELF :OrigSeq
cons          : ---EEEE--------HHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH-----HHHHHHHHHH---EEEEE-----HHHHHHHH----HHHHHHHE------------HHHHHHHHHH-----EEEEEE--------------EEEEEE-------------------HHHHH--- :cons
dsc           : ---EEE---------HHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHH-------HHHHHHHHHH--HHEEEE-----HHHHHHHH----HHHHHHHH------------HHHHHHHHHH------EEEE-----------------HHHHH------HH-----HHHHHHHHHH--- :dsc
mul           : --EEEEE------E-----HHHHHHH-----HHHHHHHHH------HHHHH------HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHH-----EEEEE-------HHHHHH----HHHHHHHHHHHHH---------HHHHHHHH-----EEEEE--------------EEEEEE-------------------------H-- :mul
nnssp         : ----EEE--------HHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHH------HHHHHHHHHH----EEEE------HHHHHH-----HHHHHHH-------------HHHHHHHHH-------EEEEE---------------EEEE--------------------HHHHHHHH :nnssp
phd           : --EEEEEE---EE--HHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH-----HHHHHHHHHH---EEEEE-----HHHHHHHHH----HHH-EEEEEE--------HHHHHHHHHHH-----EEEEEE---------EE---EEEEEE-------------------HHHHH--- :phd
pred          : ---EEE-------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHH------HHHHHHHHH---EEEEE-----HHHHHHHH-----HHHHHH-----EEEE----HHHHHHHHHH-----EEEEE---------------EEEEEEE------------------HHHHH--- :pred
zpred         : HEEEEEEEE--EEE----HHHHH--------HEEHHHHH--------HHHE-----------HHHHHHHHH---HHHHHHHHHHHHHHEEEE-----HHHHHHHHHH--EEEEEEE-----EEEEHHH---HHHHHHHHHHHHHHEEE-----HHHHHHHHHH---HEEEEEE-----HHEH---EEEEEEE---------------HEEEEHHHHHHHH :zpred


access        : EBEBBBBEB-BBBBEBBBBBEBBEEBBEEEBEBBBEBBEEEEBE-BBB-BBBBEBBEBEEBBEEBBEBBBEBBBBEBEEEBEBEBBEBBBEB-E-EEBBEBBEEBEEEBBEBBBBBEEBEEBBEBBBEBBEBEEBBEBBBBBEBBEBBEEEEEBBEBBBEBBEBEEEEBBBBBBEBBEBEBBE-BBBBBBBBB-EEE-EEEBEEEEE-BBEBBEEBBEBE : access

PHD Rel       : 9369997545412110356456643113431122333544555668888986432211122579988664432112342666778777655157853589999999919938998189513677755531321111114665222024886556899999826874169998316534332221461699971457864334789665322233354159 : PHD Rel
Pred Rel      : 0055557667876755557678577809998688870999909899898888588787887798889898866667776768888898788689999768899999899958990899975755577777766768555657777588799967799999856889868998799988668877777668886789857877909978655567766000 : Predator Rel


dssp          : ---EEEE--E---EE-HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH-----HHHHHHHHHHHHH-EE---HHHHHHHHHH---EEEEEE---HHHHHHHHHH---HHH--EEEE-HHH------HHHHHHHHHHH---HHHEEEEE--HHHHHHHHHH---EEEE---------------EEE--HHHHHH-- :dssp
define        : ---EEEEEE---EEEEHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHH---HHHHHHHHHHH--EEEEE-HHHHHHHHHHHHHEEEEEEE--HHHHHHHHHHHHH------EEEEE--------HHHHHHHHHHHHH----EEEEEEEHHHHHHHHHHHH--EEEEE--EEEEE---EEEEEEE-HHHHHHHHH :define
stride        : ---EEEE------EEHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH-----HHHHHHHHHHHH--EE--HHHHHHHHHHHH--EEEEEE---HHHHHHHHHHH--HHH--EEEE-HHH------HHHHHHHHHHH---HHHEEEEE--HHHHHHHHHH---EEEE---------------EEE--HHHHHHH- :stride


Q3 values for 1jud-1-GJB  View SS in Rasmol

	dssp	define	stride
phd	79.55	68.18	77.73
dsc	73.64	60.00	72.73
pred	71.36	57.27	68.64
mul	69.55	51.36	66.82
nnssp	77.27	63.18	76.36
zpred	62.27	51.82	60.91
cons	79.55	65.45	77.73