Results for 1knb-1-AS


1knb-1-AS    : NDKLTLWTTPAPSPNCRLNAEKDAKLTLVLTKCGSQILATVSVLAVKGSLAPISGTVQSAHLIIRFDENGVLLNNSFLDPEYWNFRNGDLTEGTAYTNAVGFMPNLSAYPKSHGKTAKSNIVSQVYLNGDKTKPVTLTITLNGTQETGDTTPSAYSMSFSWDWSGHNYINEIFATSSYTFSYIAQE : AD19FIBER
AD19FIBER    : IDLRTLWTTPDTSPNCTIAQDKDSKLTLVLTKCGSQILANVSLIVVAERYHIIN.NKTNFTIKLLFNKNGVLLDNSNLGKAYWNFRSGNSNVSTAYEKAIGFMPNLVAYPKSK.KYARDIVYGTIYLGGKPDQPAVIKTTFNQETG...CEY...SITFDFSWSKTYEN.VEFETTSFTFSYIAQE : FIBP_ADE31
FIBP_ADE31   : YDPLTLWTTPDPPPNCTLRQELDAKLTLCLTKNESIVNGIVSLIGVKGDLLHIQPTTTTVGLHLVFDRQGRLVTTTPTALVSWGYKQGQSVSSSAVANALGFMPNVSAYPRPNAGEAKSQMLSQTYLQGDTTKPITMKVVFNGNAT..VDGY...SLTFMWTGVSNYLN.QQFSTPSCSFSYIAQ. : FIBP_ADE1A
FIBP_ADE1A   : DNINTLWTGINPEANCQMMDENDCKLILTLVKTGALVTAFVYVIGVS.NNFNMLTTYRNFTAELFFDSAGNLLTSLSSLKTPLNHKSGQNMATGAITNAKSFMPSTTAYPFSREK..ENYIYGTCHYTASTAFPIDISVMLNQRAIRADTSY...CIRITWSWNTGDAPETTLVTSPFTFYYIRED : HAU06107
HAU06107     : DSINTLWTGIKPPPNCQIVEDNDGKLTLVLVKNGGLVNGYVSLVGVS.DTVNQMFTQKSIQLRLYFDSSGNLLTDESNLKIPLKNKSS.TATSEVLQPAEAFMPSTTAYPFTRDS..ENYIHGICYYMTSSLVPLNISIMLNSRTISSNVAY...AIQFEWNLNAKESPEATLTTSPFFFSYIRED : FIB1_ADE40
FIB1_ADE40   : TTPTTLWTTADPSPNATFYE.LDAKVWLVLVKCNGMVNGTISIKAQK...GTLLKPTASISFVMYFYSDGTWRKNYPVFDNTWGYRQGQS.ANTNVSNAVEFMPSSKRYPNEKGSEVQNMALTYTFLQGDPNMAISFQSIYNHAIEG....Y...SLKFTWRVRNNE...R.FDIPCCSFSYVTE. : S52807
S52807       : LKNNTLWTGPKPEANCIIEYEPDSKLTLILVKNGGIVNGYVTLMGAS.DYVNTLFKNKNINVELYFDATGHILPDLSSLKTDLQLKYKQ....TTHFSARGFMPSTTAYPFNAGTDNENYIFGQCYYKASALFPLEVTVTLNKRLPDSRTSY...VMTFLWSLNAGLAPEATLITSPFTFSYITED : ADRFIBERX
ADRFIBERX    : YDKLTLWTTPDPSPNCQILAENDAKLTLCLTKCDSQILATVSVLVVRGNLNPITGTVSSAQVFLRFDANGVLLTEHSTLKKYWGYKQGDSIDGTPYTNAVGFMPNSTAYPKTQSSTTKNNIVGQVYMNGDVSKPMLLTITLNGT...DDTTS.AYSMSFSYTWTNGSYIGATFGANSYTFSYIAQ. : HAU06106
HAU06106     : IENNTLWTGAKPSANCVIKEDPDCKLTLVLVKNGGLINGYITLMGAS.EYTNTLFKNNQIDVNLAFDNTGQIITYLSSLKSNLNFKDNQNMATGTITSAKGFMPSTTAYPFATETLNEDYIYGECYYKSTTLFPLKVTVTLNRRMLASGMAY...AMNFSWSLNAEEAPEVTLITSPFFFSYIRED : FIBP_ADE02
FIBP_ADE02   : DDKLTLWTTPDPSPNCRIHSDNDCKFTLVLTKCGSQVLATVAALAVSGDLSSMTGTVASVSIFLRFDQNGVLMENSSLKKHYWNFRNGNSTNANPYTNAVGFMPNLLAYPKTQSQTAKNNIVSQVYLHGDKTKPMILTITLNGTSESTETSESTYSMSFTWSWESGKYTTETFATNSYTFSYIAQE : FIBP_ADE15
FIBP_ADE15   : EDMRTLWTTPDPSPNCKIIEDKDSKLTLILTKCGSQILGSVSLLVVKGKFSNIN.NTTNITVKLLFDANGVLKQGSTMDSSYWNYRSDNSNLSQPYKKAVGFMPSKTAYPKKEISQAKNKIVSNVYLGGKIDQPCVIIISFNEEAD...SDY...SIVFYFKWYKTYEN.VQFDSSSFNFSYIAQE : S75136B
S75136B      : NDRRTLWTTPDPSPNCRVSEDKDSKLTLILTKCGSQILASFSLLVVKGTYATVDKNTTNFSIKLLFDANGKLKSESNLSG.YWNYRSDNSVVSTPYDNAVPFMPNTTAYPKKK.SSAKKTIVGNVYLEGNAGQPVAVAISFNKETT...ADY...SITFDFAWSKAYETPVPFDTSSMTFSYIAQE : KITH_HSVF

             : 396-------406-------416-------426-------436-------446-------456-------466-------476-------486-------496-------506-------516-------526-------536-------546-------556-------566-------576--- :
OrigSeq      : NDKLTLWTTPAPSPNCRLNAEKDAKLTLVLTKCGSQILATVSVLAVKGSLAPISGTVQSAHLIIRFDENGVLLNNSFLDPEYWNFRNGDLTEGTAYTNAVGFMPNLSAYPKSHGKTAKSNIVSQVYLNGDKTKPVTLTITLNGTQETGDTTPSAYSMSFSWDWSGHNYINEIFATSSYTFSYIAQE :OrigSeq
cons         : ---EEEE---------EEE-----EEEEEEE----EEEEEEEEEEE------EE-----EEEEEEE----EEEE---------------------------------------------EEEEEEEE-------EEEEEEE------------EEEEEEEEEE-------EEEEE--EEEEEE--- :cons
dsc          : ---EEEEE-------EEEE-----EEEEEEEE---EEEEEEEEEEEE-EEEEEE--EEEEEEEEEE----EEEE-----EEEEEEE-----------EEEEEE---------------EEEEEEEEE-------EEEEEEEE-----------EEEEEEEEEEE-----EEEEEE-EEEEEEE--- :dsc
mul          : ---------------EEEE------HEEEEE----EEEEEEEEEEE------E------EEEEEEH------------------------------------------------------EEEEEE--------EEEEEE---------------EEEEEE-----------------EEEEE--- :mul
nnssp        : ----EEE---------EE-------EEEEEE-----EEEEEEEEEE-------------EEEEEEE-----EE-----------------------------------------------EEEEEEE-------EEEEEEE-------------EEEEEEEE---------EE----EEEEEE--- :nnssp
phd          : ---EEE-----------EEE----EEEEEEE----EEEEEEEEEEE------EE-----EEEEEEEE---EEEEE--------------------------------------------EEEEEEEEE------EEEEEEE------------EEEEEEEEEE-------EEEEE--EEEEEEEE- :phd
pred         : ---EEEE------------------EEEEEE-----EEEEEEEEEE---------------EEEEE------------------------------------------------------EEEEEEE-------EEEEEEE-------------EEEEEEE-----------------EEEEE--- :pred
zpred        : ---EEEEE-------EEEEHHHHHHHHEEEEE--EEEEEEEEEEEE------------EEEEEEEE------EE-----------------------EEEEEEE----EE---------EEEEEEEE-----EEEEEEEEE---------------EEEE-----------EEE-----EEEEHHH :zpred


access       : EEEEBBBE-EEEEEEBEBBEEEEBEBBBBBBEBBBEBBBBBBBBBBEEEBBBBBBEB-BBBBBBBBEBEBEBBEEBEBBEB-BEBEEEEEBBBEBBBEBBBBBEEBEB-EEEEEEEBEEBBBBBBBBEBEEE-BBBBBBBBEEEBEEEEBBBBBBBBBBBBBBEEEE-BEBEBBBBEBBBBBBBEE : access

PHD Rel      : 993243159999986511212575179999647936999999999368733013134222799999258747553367754223336986665434212124675467867766665315789999751788855999984367889998842148888899637887622233121336887529 : PHD Rel
Pred Rel     : 007676670090090000667776709998568966666666666687866677888657776965699965578988888777799999877888876667099000899999777765565576679999975099955666677899797755555555678989777666799776556000 : Predator Rel


dssp         : ----EEE--------E-------EEEEEEEEEE--EEEEEEEEEE----E--E-----EEEEEEEE-----E-----E-HHH-EEEE--EE--------HHH-E------------HHHEEEEEEEE------EEEEEEEE-------------EEEEEEEE-----------EE--EEEEEEE-- :dssp
define       : ---EEEE----------------EEEEEEEEE---EEEEEE-EEEEE-------------EEEEEE--------------------------EEEEE---------------------EEEEEEE-------EEEEEEEEEE-------EEEEE-EEEEEEEE-EEEE-------EEEEE-EEEEE :define
stride       : ----EEE--------E-------EEEEEEEEEE--EEEEEEEEEE-------E-----EEEEEEEEE---EE-----E-----EEEE--EE--------HHH-E------------HHHEEEEEEEEHH----EEEEEEEE-------------EEEEEEEE--------E--EEEEEEEEEEE-- :stride


Q3 values for 1knb-1-AS  View SS in Rasmol

	dssp	define	stride
phd	76.88	74.73	79.03
dsc	74.73	65.59	73.66
pred	79.57	79.57	77.96
mul	76.88	74.73	75.27
nnssp	80.11	76.88	78.49
zpred	70.43	66.67	68.82
cons	79.03	75.81	79.57