Results for 1latb-1-AUTO.1


1latb-1-AUTO.1    : ARPCLVCSDEASGCHYGVLTCEGCKAFFKRAVEGQHNYLCKYEGKCIIDKIRRKNCPACRYRKCLQAGMNLEAR : CEC01H65
CEC01H65          : VIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSIVNYQCPRQKNCVVDRVNRNRCQYCRLKKCIELGMSRDAV : ESTR_SHEEP
ESTR_SHEEP        : TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCY......... : OAES3EXN2
OAES3EXN2         : TRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGM : I50516
I50516            : KRMCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREAV : RRXB_HUMAN
RRXB_HUMAN        : KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAV : SSU84399
SSU84399          : ..LCPVCGDKVSGYQYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRPEAV : I50515
I50515            : KHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCQIDKRQRNRCQYCRYQKCLAMGMKREAV : UPU31832
UPU31832          : ......CGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERSCTIDKRQRNRCQYCRYQKCLTMGMKSEAV : GGRARG2
GGRARG2           : YKPCFVCSDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQINKVTRNRCQFCRLQKCFEVGMSKEAV : RORB_RAT
RORB_RAT          : VIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAV : S79937
S79937            : ....................CGSCKVFFKRAMEGQHNYLCAGRNDCIVDKIRRKNCPACRLRKCCQAVMVLGGR : I50514
I50514            : KHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCMIDKRQRNRCQYCRYQKCLAMGMKREAV : THA_CHICK
THA_CHICK         : DEQCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDCVIDKITRNQCQLCRFKKCISVGMAMDLV : I50689
I50689            : HIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAV : FTF1_BOMMO
FTF1_BOMMO        : EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERACHIDKTQRKRCPFCRFQKCLDVGMKLEAV : GCR_XENLA
GCR_XENLA         : PKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVE.QHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEAR : PAITHRB
PAITHRB           : DELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLNPTYACKYECVIDKVTRNQCQECRFKKCIAVGMATDLV : I47140
I47140            : TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGI : S83309
S83309            : QRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAI : I51330
I51330            : .........EASGCHYGALTCGSCKVFFKRAAEGKQKYLCASRNDCTIDKFRRKNCPSCRLRKCYEAGMTLGAR : XLHNF4MR
XLHNF4MR          : NSLCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAV : XLMCRS1
XLMCRS1           : .KVCLVCGDEASGCHYGVVTCGSCKVFFKRAVEG.HSYLCAGRNDCIIDKIRRKNCPACRLQKCLQAGMNLGAR : HSRNAERB
HSRNAERB          : AHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGS : EAR2_HUMAN
EAR2_HUMAN        : QVDCVVCGDKSSGKHYGVFTCEGCKSFFKRTIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKEAV : E78A_DROME
E78A_DROME        : FVPCKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEYRCLRDGKCLVIRLNRNRCQYCRFKKCLSAGMSRDSV : ESTR_SALIR
ESTR_SALIR        : TRYCAVCSDFASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTMDRNRRKSCQACRLRKCYEVGMVKGGL : MMU85259
MMU85259          : KRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGV : FTFB_DROME
FTFB_DROME        : NSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAI : I59309
I59309            : VEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFCRLKKCLEMGMKMESV : ERR2_HUMAN
ERR2_HUMAN        : KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGV : B47265
B47265            : HVPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQCVVDKTHRNQCRACRLRKCFEVGMNKDAV : AB003356
AB003356          : MHFCAVCHDYASGYHYGVWSCEGCKAFFKRSIQGHNGYICPATNQCTIDKNRRKSCQACRLRKCYEVGMMKCGV : HNF4_DROME
HNF4_DROME        : PTVCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRNQCRYCRLRKCFKAGMKKEAV : XLHNF4B
XLHNF4B           : NSFCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHVYACRFSRQCIVDKDKRNQCRYCRLRKCFRAGMKKEAV : JC6095
JC6095            : NCLCAICGDRATGKHYGASTCDGCKGFFRRSIRKSHIYSCRFSRQCVVDKDKRNQCRYCRLRKCFRAGMKKEAV : XLU67886
XLU67886          : DIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRSYVCKSGNQCPVDKTHRNQCRACRLKKCLEVNMNKDAV : S35334
S35334            : NVDCMVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRGNRDCPIDQHHRNQCQYCRLKKCLKVGMRREAV : CEF11C1
CEF11C1           : GEMCPVCGDRVSGYHYGLLTCESCKGFFKRTVQNKKQYQCSAEANCHVDRTCRKRCPSCRFQKCLTMGMKMEAV : CELC26B22
CELC26B22         : DSVCAVCGDGIAKLHYGVLACYGCKGFFRRTLTGKYRYACRFSNNCIVDKFQRNSCRYCRFQRCIQAGMDPKAV : CEK10C35
CEK10C35          : AEPCAVCGDKSTGTHYGVISCNGCKGFFRRTVLRDQKFTCRFNKRCVIDKNFRCACRYCRFQKCVQVGMKREAI : YKC8_CAEEL
YKC8_CAEEL        : EEVCLVCSDISTGYHYGVPSCNGCKTFFRRTIMKNQTFSCQFQGKCPVDKSIRCACRHCRFEKCLQVGMDRNAI : CEC02B41
CEC02B41          : GELCSVCGDVASGIHYSVAACNGCKTFFRRVVLENRTYSCKNNGDCIIDKSMRCSCRHCRYKKCIIAGMDRGEL : GCR_ONCMY
GCR_ONCMY         : .KICLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRFRKCLQAGMNLEAR : D86615
D86615            : YKPCFVCGDKSSGYHYGVASCEGCKGFFRRSVQKNMQYTCHRNKNCVINKSTRSRCQYCRLQKCFQVGMLKESV : A56197
A56197            : LRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPT..CPFACEVSKTQRRHCPACRLQKCLDAGMRKDMI : TMECDYREC
TMECDYREC         : EELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQ..CKYGCEIDMYMRRKCQECRLKKCLSVGMRPECV : SFU53561

                  : 437-------447-------457-------467-------477-------487-------497-------507- :
OrigSeq           : ARPCLVCSDEASGCHYGVLTCEGCKAFFKRAVEGQHNYLCKYEGKCIIDKIRRKNCPACRYRKCLQAGMNLEAR :OrigSeq
cons              : --EEEEE---------EEE-----HHHHHHHHH----EE----------------HHHHHHHHHHHHHH----- :cons
dsc               : ---EEE------------------HHHHHHHHH---EEE-----------------HHHHHHHHHHHH------ :dsc
mul               : --EEEEE----------EEE----EEEHH--------EEE-----EEEH-----------HHHHHHHHH--HHH :mul
nnssp             : --EEEEE----------EE------HHHHHHH-----EE------------------HHHHHHHHHH------- :nnssp
phd               : --EEEEE--------EEEE---HHHHHHHHHHH----E----------------HHHHHHHHHHHHHHH----- :phd
pred              : ----------------EEE------HHHHHHHH----------------------HHHHHHHHHHHHHHHH--- :pred
zpred             : ---EEE------------------HHHHHEH--------------EEEE---------EEE-HEHHHHHHHHHH :zpred


access            : EEBBBBBBEEBBB--BBBBBBEBBEEBBE-BBEEEBEBBBEBEEEBBBEEE-EEEBEBBEBEEBBEBBBEEEBE : access

PHD Rel           : 93577522344665112112422244466655315421115665422333432323688767899763143579 : PHD Rel
Pred Rel          : 00976678899998877807009966675565777706678999965565577796778866888867777000 : Predator Rel


dssp              : --E------E--EEE--EEE-HHHHHHHHHHHH-------------------HHH-HHHHHHHHHH-------- :dssp
define            : --------EEEE--------HHHHHHHHHHHHHEEEEEEE---EEEE--------HHHHHHHHHHHHH------ :define
stride            : --E------E--EEE--EEE-HHHHHHHHHHHH-----------------------HHHHHHHHHHH------- :stride


Q3 values for 1latb-1-AUTO.1  View SS in Rasmol

	dssp	define	stride
phd	74.32	63.51	77.03
dsc	70.27	72.97	75.68
pred	72.97	64.86	78.38
mul	48.65	45.95	54.05
nnssp	71.62	60.81	77.03
zpred	47.30	47.30	52.70
cons	70.27	64.86	75.68