Results for 1lib-1-DOMAK


1lib-1-DOMAK    : CDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDLVTIRSESTFKNTEISFKLGVEFDEITADDRKVKSIITLDGGALVQVQKWDGKSTTIKRKRDGDKLVVECVMKGVTSTRVYERA : FABE_MOUSE
FABE_MOUSE      : LKDLEGKWRLMESHGFEEYMKELGVGLALRKMAAMAKPDCIITCDGNNITVKTESTVKTTVFSCNLGEKFDETTADGRKTETVCTFQDGALVQHQQWDGKESTITRKLKDGKMIVECVMNNATCTRVYEKV : S06479
S06479          : VDAFVGTWKLTESQNFDEYMKSLGVGFATRQVGNMTKPTLIISVNGDTEIIKTQSTFKNTEISFHLGEEFDDTTADDQKVKSIVTLDGGKLVHVQKWDGQESSLVREMVAGKLILTLTHGDVVAVRHYEKQ : FABI_HUMAN
FABI_HUMAN      : ..AFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSAFRNIEVVFELGVTFNYNLADGTELRGTWSLEG.KLIGKFKRT.NELNTVREIIG.ELVQTYVYEGVEAKRIFKKD : CELF40F44
CELF40F44       : PDKFYGTFDLDHSENFDEYLTAKGYGWFTRKLVTFATFKKVFTKTSNLFDYSNLTSKKDVHYKVQLGKAFQGEGLDSTKHEITFTLKD.HLFEHHKPLAKEETYEYLFDK.FLLVRMSFNGVEGRRFYKRL : FABA_BOVIN
FABA_BOVIN      : CDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPTLIISLNGGVVTIKSESTFKNTEISFKLGQEFDEITPDDRKVKSIVNLDEGALVQVQNWDGKSTTIKRKLMDDKMVLECVMNGVTATRVYERA : ILBP_RABIT
ILBP_RABIT      : ..AFTGKFEMESEKNYDEFMKLLGLPSDVVEKSRNIKIVTEIKQDGQDFTWSHHYSGGQIMTNFTIGKESEIQTFGGKKFKAVVNMEG.KVVANFPN....YQHTSEIKGDKLVEVSSIGGVTYERVSKRL : RET3_XENLA
RET3_XENLA      : .PNFSGHWKMKQSENFEEMLKALGVNLMLRKIAVAAAPAVEIKQEGETFYIKTSTTVRTTEINFKIGEEFDEQTVDGRPCKSLAKWVSEKMACEQKLLGPKTAWTREMTNDELILTMTADDVVCTRIYIRD : MYP2_MOUSE
MYP2_MOUSE      : SNKFLGTWKLVSSEHFDDYMKALGVGLANRKLGNLAKPTVIISKKGDYITIRTESAFKNTEISFKLGQEFDETTADNRKAKSIVTLERGSLKQVQKWDGKETAIRRTLLDGRMVVECIMKGVVCTRIYEKV : FABB_CHICK
FABB_CHICK      : VEAFCATWKLADSHNFDEYMKALGVGFAMRQVGNVTKPTVIISSEGDKVVIRTQSTFKNTEISFKLGEEFDETTPDDRNCKSVVTLDGDKLVHVQKWDGKETNFVREIKDGRMVMTLTFGDVVAVRHYEKA : RET2_HUMAN
RET2_HUMAN      : TRDQNGTWEMESNENFEGYMKALDIDFATPKIAVRLTQTKVIDQDGDNFKTKTTSTFRNYDVDFTVGVEFDEYTLDNRHVKALVTWEGDVLVCVQ...KENRGWKQWIEGDKLYLELTCGDQVCRQVFKKK : A44864
A44864          : MADFVGSWKYGHSENMEAYLKKIGVSSDMVDKILNAKPEFTFTLEGNKMTIKMVSSLKTKITTFTFGEEFEEET.DGKKVMTKVTKDSEKMTQVIKGPECITEVVREVVGDKMIATWTVGDVKAVTTLLKA : FABL_PIG
FABL_PIG        : .MNFSGKYQVQSQENFEAFMKAVGLPDELIQKGKDIKGTSEIVQNGKHFKLTITTGS.KVVQNFTLGEECEMETLTGEKVKTVVQLEGDKLVTTFKG....IKSVTELNGDIITSTMTLGDIVFKRISKRI : SCMFABP
SCMFABP         : MSSFLGKWKLSESHNFDAVMSKLGVSWATRQIGNTVTPTVTFTMDGDTMTMLTESTFKNLSVTFKFGEEFDEKT.DGRSVKSVVTKDSEKITHTQKDSKNTTVIVREIVGDTMKTTVTVDDVTAIRNYKRL : ILBP_RAT
ILBP_RAT        : ..AFTGKYEFESEKNYDEFMKRLGLPDEVIERGRNFKIITEVQQDGENFTWSQSYSGGNIMSNFTIGKECEMQTMGGKKFKATVKMEG.KVVADFPN....YHQTSEVVGDKLVEISTIGDVTYERVSKRV : A61629
A61629          : MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAAPHVEIRQDGDQFYIKTSTTVRTTEINFKIGESFEEETVDGRKCRSLATWQNEKIH....................................... : RET1_HUMAN
RET1_HUMAN      : PVDFTGYWKMLVNENFEEYLRALDVNVALRKIANLLKPDKEIVQDGDHMIIRTLSTFRNYIMDFQVGKEFEEDLIDDRKCMTTVSWDGDKLQCVQ...KEGRGWTQWIEGDELHLEMRVEGVVCKQVFKKV : FABM_LOCMI
FABM_LOCMI      : VKEFAGKYKLDSQTNFEEYMKAIGVGAIERKAGLALSPVIELEVLGDKFKLTSKTAIKNTEFTFKLGEEFDEDTLDGRKVKSIITQDGPKLVHEQKGD.HPTIIIREFSKEQCVITIKLGDLVATRIYKAQ : ILBP_PIG
ILBP_PIG        : ..AFTGKYEIESEKNYDEFMKRLALPSDAIDKARNLKIISEVKQDGQNFTWSQQYPGGHSITNFTIGKECDIETIGGKKFKATVQMEG.KVVVNSPN....YHHTAEIVDGKLVEVSTVGGVTYERVSKKL : A48578
A48578          : MEAFLGTWKMEKSEGFDKIMERLGVDFVTRKMGNLVKPNLIVTDLGGKYKMRSESTFKTTECSFKLGEKFKEVTRFTRGHFFMITVENGVMKHEQDDKTKVTYIERVVEGNELKATVKVDEVVCVRTYSKV : AGU50472
AGU50472        : MAVWEGKYKMEKSEGFDDYMLALGVGMVLRKLGNSISPTVELVKNGDEYTFNTLSPSRTRRSSSSWAMEFDEETVDGRMVKSVCTFDGNKLIHEQKG...............EKRPRS.....CASSLPPI : I51450
I51450          : .MAFDGTWKVDRSENYEKFMEVMGVNIVKRKLGAHDNLKVIIQQDGNNFTVKESSTFRNIEIKFTLAQPFEYSLADGTELNGAWFLQD.QLLGTFTRK.KVLQTTRQIIG.ELVQTYEYEGTESKRIFKRG : ASU51906
ASU51906        : PDKFLGTFKLERDENFDEYLKARGYGWIMRQVIKLAGVTKKFRNAASRYDMENLTTKKDTHHKWALGEEFQDEALDSTQHKITFDLKDPTLTETHIKVTDVETYEYRRDG.YLVMKMSWKGVSTSRYYKKQ : CELF40F43
CELF40F43       : PEKFFGKYDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETKYNMENLTSKKNTLYHWELGKTFEAEGLDGVAHKITFSFKD.VLSEHHIRLHSAETYYYTIEN.QLVMKMVNNGITCRRWFKRS : CELZK7424
CELZK7424       : PDKFFGRYQLDKSENFDEFLSSKGVNWFVRQMIKLAGLTKIISQNQEKYNMENLTSKKNTNYQWELGKKFEAPGLDGNQHEITFDFKD.ILSEHHIRLTSAETYFYTIDDQQLVMRMENNGIVCRRWFKRV : BTU58106
BTU58106        : .MPIEGKYKLEKSDNFDKFLDELGVGFMVKTAAKTLKPTLEVDVQGDTYVFRSLSTFKNTEIKFKLGEEFEEDRADGKRVKTVVNKEGDKFIQTQYGD.KEVKIVRDFQGDDVVVTASVGDVTSVRTYKRI : A44638
A44638          : .ADFVGSWKLEHSENMDGVWKALGVPSDMVDKARNEKPEFTFELEGNKMTIKMVSSLKTKTTTFTFGEEFKDET.DNRTVMSTVTKDSEKITQVQKGPEHTTHIVREVTGDKMVITITVGDVKAVNTLRKM : TLBP_RAT
TLBP_RAT        : IEPFLGTWKLVSSENFENYVRELGVECEPRKVACLIKPSVSISFNGERMDIQAGSACRNTEISFKLGEEFEETTADNRKVKSLITFEGGSMIQIQRWLGKQTTIKRRIVDGRMVVECTMNNVVSTRTYERV : FABL_GINCI
FABL_GINCI      : VEAFLGSWKLQKSHNFDEYMKNLDVSLAQRKVATTVKPKTIISLDGDVITIKTESTFKSTNIQFKLAEEFDETTADNRTTKTTVKLENGKLVQTQRWDGKETTLVRELQDGKLILTCTMGDVVCTREYVRE : OMU95296
OMU95296        : AEAFAGTWNLKDSKNFDEYMKALGVGFATRQVGGMTKPTTIIEVAGDTVTLKTQSTFKNTEISFKLGAEFDETTADDRKVKSLITIDGGKMVHVQKWDGKETTLVREVSGNALELTLTLGDVVSTRSYVKA : CET22G52
CET22G52        : MNDFIGRWKLVQTENFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTKLSFKLGEEFVENSPDDRTYNSLFTFENGKLTHRQNKIHKSSVLTTWLENGKLIQTYQSGDVICRREWERE : CELW02D32
CELW02D32       : SQEFVGRWKLIHSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFKNTTLSFKLGQEFDETTPDGRTVKSVVNFENGKFIHIQKKIDKESIITRWLEGDKLITTLESGSVVSRREYVRE : CELW02D34
CELW02D34       : AEQFVGRWKLVESENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTTLEFTLGVEFDETTPDGRQFKSTITIEDGKVVHVQKRIDHDSVITRWFEGEKLITTLQSGSVISRRAYIRE : APLFABP
APLFABP         : .MAFNGTWQVYSQENYEDFLKAIALPDDIIKAAKDVKPVTEIRQTGNTFVVTSKTPN.KSVTNFTLGKEADMTTMDGKKVKCTVNLVD.KLVAKSDK....FIHEQEIVGNEMVETITSGSATFTRRSKKI : FABL_CHICK
FABL_CHICK      : ..AFSGTWQVYAQENYEEFLKALALPEDLIKMARDIKPIVEIQQKGDDFVVTSKTPR.QTVTNFTLGKEADITTMDGKKLKCTVHLAN.KLVTKSEK....FSHEQEVKGNEMVETITFGGVTLIRRSKRV : FAB2_MANSE
FAB2_MANSE      : ..SYLGVYSLVKQENFDGFLKSAGLSDDKIQALVSDKPTQKMEANGDSYSITSTGIG.GERTVFKSGVEFDDVIGAGESVKSMYTVDG.NVVTHVVKGAGVATFKKEYNGDVVTITSSNWDGVARRYYKA. : FAB1_MANSE
FAB1_MANSE      : .MAYLGVYKFDREENFDGFLKSIGLSEEQVQKYLQYKPSSQLVKEGDKYKYISVSSD.GTKETFESGVETDDVVQGGLPIKTTYTVDG.NTVTQVVNSQGSATFKREYNGDKVTITSSEWDGVAYRYYKA. : S35334

                : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------1 :
OrigSeq         : CDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDLVTIRSESTFKNTEISFKLGVEFDEITADDRKVKSIITLDGGALVQVQKWDGKSTTIKRKRDGDKLVVECVMKGVTSTRVYERA :OrigSeq
cons            : ----EEEEEE-----HHHHHHH-----HHHHHHH----EEEEEE---EEEEEEE-----EEEEEE--------------EEEEEEE----EEEEE------EEEEEEE---EEEEEEEE--EEEEEE---- :cons
dsc             : ----EEEEEEE-----HHHHHH------HHHH------EEEEE-----EEEEEE-----EEEEEEE-------------EEEEEEE----EEEEE------EEEE-------EEEEEE---EEEEEE---- :dsc
mul             : ----------------HHHHHHH-H-HHHHHHHHH----EEEE------EE----------EE-HH-HHHHHH------HEEEEE----HHHHHH--------HHHHH---HHEEEE-----EEE------ :mul
nnssp           : -------------HHHHHHHHH-----HHHHHHHH---EEEEEE---EEEEEEE------EEEEE--------------EEEEEEE----EEEEEE-----EEEEEEE----EEEEEEE--EEEEEE---- :nnssp
phd             : ---EEEEEEE-----HHHHHHHH---EEHHHHHE----EEEEEE---EEEEEEE----EEEEEEE---EEEE------EEEEEEEE---EEEEEE-----EEEEEEEEE--EEEEEEEE--EEEEEEEEE- :phd
pred            : -------EEEEEE---HHHHHH----HHHHHHHHH----EEEEE----EEEEE------EEEEEE--------------EEEEEEE----EEEEE-------EEEEE----EEEEEEE------------- :pred
zpred           : -HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH--HEEEEE------EEE-------------HHHHHHHHHHHHHHHEEEEEHH--HHHHH----------HHH-----HEEEE-----EEEE----- :zpred

access : EEEBEBEBEBEEEEEBEEBBEBBBBBBBB-EBBEBBEBEBEBEEEEEEBBBEBEEEBEEBEBBBEBBEEBEEE-EEEEEBEBBBEBEEEEBBBBBEEEEEEBBBBEEBEEEEBBBBBBBEEBBBBEBBEEE : access PHD Rel : 97434346423563369999862673121133121286179991698199998435522588973563133215696136899984299199997189962568998508679999952346989885439 : PHD Rel Pred Rel : 00677655555500809809786099877787856888758888999788887688977785555667658578999876668897799769987799970555555579966999568686657777000 : Predator Rel

dssp : -HHH-EEEEEEEEE-HHHHHHHH---HHHHHHHHHH--EEEEEEE--EEEEEEE-----EEEEE-----EEEE-----EEEEEEEEE--EEEEEEEE--EEEEEEEEEE--EEEEEEEE--EEEEEEEEE- :dssp define : -----EEEEE-EEEEHHHHHHHHH-HHHHHHHHHHHEEEEEEE---EEEEEEEEE--EEEEE-------EEEEE---EEEEEEEE---EEEEEEEE----EEEEEEE----EEEEEEE--EEEEEEEEEEE :define stride : -HHH-EEEEEEEEE-HHHHHHHH---HHHHHHHHHH--EEEEEEE--EEEEEEE----EEEEEEE----EEEE-----EEEEEEEEE--EEEEEEEE--EEEEEEEEEE--EEEEEEEE--EEEEEEEEE- :stride
Q3 values for 1lib-1-DOMAK View SS in Rasmol dssp define stride phd 83.21 74.05 84.73 dsc 69.47 64.12 69.47 pred 70.99 64.12 70.99 mul 49.62 48.09 48.85 nnssp 74.05 66.41 74.05 zpred 45.80 46.56 44.27 cons 77.86 69.47 77.86