Results for 1mai-1-JAC


1mai-1-JAC    : GLQDDPDLQALLKGSQLLKVKSSSWRRERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIH : I54390
I54390        : ISSANDCISFMQAGCELKKVRPNSRIYNRFFTLDTDLQALRWEPSKKDLEKAK..LDISAIKEIRLGKNTETFTNLADQICEDCAFSILHGENYESLDLVANSADVANIWVSGLRYLVS : RAT7A
RAT7A         : LLTTNQDLLLMQKGTMMRKVRTKSWKKLRYFRLQDDGMTVWHGRHLESISKPT..FSISDVERIRKGQDSELLRYLVEEFPLEQGFTIVFNGRRPNLDLVANSVEEAQTWMRGLQLLVD : S14113
S14113        : RLPINQDLLLMQKGTMMRKVRSKSWKKLRFFRLQDDGMTVWHARQAGGRAKPS..FSISDVDTVREGHESELLRNLAEEFPLEQGFTIVFHGRRSNLDLVANSVQEAQTWMQGLQLLVG : JT0672

              : 12--------22--------32--------42--------52--------62--------72--------82--------92--------102-------112-------122------ :
OrigSeq       : GLQDDPDLQALLKGSQLLKVKSSSWRRERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIH :OrigSeq
cons          : -----HHHHHHH---HHEEE----HHHHHHHHH----HHHHHHHHHHH---------HHHHHHHHH---HHHHHHHHHH------EEEEE------HHHHH--HHHHHHHHHHHHHH-- :cons
dsc           : -----HHHHHHHHHHHHHHH---HHHHHHHHHHH---HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHH--------EE-------HHHHH--HHHHHHHHHHHHH--- :dsc
mul           : --------HHHHH-HHHHHHH------EEEE-H----HHHHH------------------HHHH------HHHHHHHHHH-H--HHEEEE-------E-E------HHHHHHHHHEEE- :mul
nnssp         : -----HHHHHHH-----------------EEEE----HHHHHHHHHHH------EE-HHHHHHHHH---HHHHHHHHHHH-----EEEEE------HHHHH--HHHHHHHHHHHHHHHH :nnssp
phd           : -----HHHHHHH---EEEEE----HHHHHHHHH------EEE----------------HHHHHHHH---HHHHHHHHHH------EEEEE------HHHH---HHHHHHHHHHHHHH-- :phd
pred          : -------HHHHHHHHHH-------HHHHHHHHHH----HHHHHHHHHH----------HHHHHHH----HHHHHHHHHHH-----EEEEEE--------------HHHHH-HHHHH--- :pred
zpred         : E----HHHHHHHHHHHHHHHH-------EEEE-----HHHHHH-------------EHHHHHHHHH---HHHHHHHHHHHHHHHHHEEEE------EEEEEHHHHHHHHHHHHEEEEEE :zpred


access        : E-EEEEBBBBB-EBEEB-EB-EEE-EEB-BBEBEEEBEBB-EEEEEEEEEEEEEBBBBEBBEEB-EEEEEEBBEEBBEEBBEE-BBBBBBEE--EBBEBBBEBBEEBEBBBEBBEBBBE : access

PHD Rel       : 99997445785124325551541112466431136644214422223577787642221236886157549999999964732546988528765257650563799999999986218 : PHD Rel
Pred Rel      : 00990000778706687700587777999998860766770675685579999606766807707699776887696665777766797879977756855997788788967776000 : Predator Rel


dssp          : -----HHHHHHHH-EEEEEE-----EEEEEEEE-----EEEE------------EEEHHHEEEEEE----HHHHHH-----HHHEEEEEE------EEEE---HHHHHHHHHHHHHHH- :dssp
define        : ----HHHHHHHHHH-EEEEEE----EEEEEEEEE----EEEEE------HHHHHH--------------HHHHHHH----------EEEE----EEEEEE--HHHHHHHHHHHHHHHHH :define
stride        : -----HHHHHHHH-EEEEEE-----EEEEEEEE-----EEEE--------HHHHEEEHHHEEEEEE----HHHHHHH-------EEEEEE------EEEE---HHHHHHHHHHHHHHH- :stride


Q3 values for 1mai-1-JAC  View SS in Rasmol

	dssp	define	stride
phd	70.59	63.87	70.59
dsc	50.42	44.54	50.42
pred	51.26	47.90	51.26
mul	60.50	55.46	58.82
nnssp	63.03	54.62	63.03
zpred	63.03	52.94	57.98
cons	60.50	52.94	60.50