Results for 1masb-1-AUTO.1


1masb-1-AUTO.1    : AKKIILDCDPGLDDAVAILLAHGNPEIELLAITTVVGNQTLAKVTRNAQLVADIAGITGVPIAAGCDKPLVRKIMTKNKVDERHAVNLIIDLVMSHEPKTITLVPTGGLTNIAMAARLEPRIVDRVKEVVLMGGGYHEGNATSVAEFNIIIDPEAAHIVFNESWQVTMVGLDLTHQALATPPILQRVKEVDTNPARFMLEIMDYYTKIYQSNRYMAAAAVHDPCAVAYVIDPSVMTTERVPVDIELTGKLTLGMTVADFRNPRPEHCHTQVAVKLDFEKFWGLVLDALERIGDPQ : CELF13H82
CELF13H82         : TVKLIIDTDGVYDDIRGLTIALTNQNVEVIAITTVHGGVTANQSAANVARLLRAIGKHNVPVFIGAQDSLVPKIQVWEELFGSAQVGNAVDAIINLTKKDIILVGLGPLTNIAMAIRKDPDISKRVKQVVIMGGNYLVGNTQFTAEFNFLMDPEAAHIVLSSL.HTTMIPWDTCFLKGPEYNEEVDYEESLNQKTKLSYFLSNITARGRQYNASGQIYAFVDDIAVSVAIDPRAVRNMTLCSSVELKKEVARGQVTVDWLTTKYDIVDRAFKTSSNTEYNVKRVNEMLIRAVKLS : S69683
S69683            : KIPIWLDCDPGHDDAIAILLGCFHPAFNLLGISTCFGNAPPENTDYNARSLLTAMGKQAIPVYKGAQRPWKREPHYAPDIHGIKTYIEAIEEAILANNGEISFVSTGALTTLATVFRCKPYLKKSVKYISIMGGGLHLGNCNPSAEFNVWIDPDAANYIFRDPDKCIVVPLNLTHKAIATYKVNEMIYNEKNNLRELFLELFQFFAHTYKDMGFESGPPIHDPVALMPLLEPSGFRYKRMDISCIDDVFENSGKIIIEKEYPNDSDVGTIIGLDLNIQYFWDQIFEALNRADKMS : YEIK_ECOLI
YEIK_ECOLI        : KRKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLE.INVPVYAGMPQPIMRQQIVADNIHGEHAVKYIIDTLMASD.GDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGYIKTH : YD62_SCHPO
YD62_SCHPO        : NYNIWIDCDPGHDDVVALTLAACAGHCKILGVSTVHGNTTLEFTTKNALAVMELLN.QDVDVHAGAAKPLMRESAFATHIHGTDAVFAMYTTISNYP.EPVTLVATGPLTNIALLLATYPSVTDNIERFIFMGGSTGIGNITSQAEFNVYADPEAARLVLETKGKLFMVPLDVTHKVLLDANIIQLLRQHSNPFSSTLVELMTVFQQTYENVGIRNGVPVHDVCAVALALWPSLWTSRSMYVTVSLDS.LTLGRTVCDVWSQQNYPANVHVVLEADVSLFWETFIGVIDRLNYL. : ECAE0001698
ECAE0001698       : ALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIADNVHGETAVELMAKTLRESA.EPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEWGFVGAPLHDPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTVVDYYYLTGNKPNATVMVDVDRQGFVDLLADRLKFYA... : YAAF_ECOLI
YAAF_ECOLI        : RLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLHFWN.AEIPLAQGAAVPLVRAPRDAASVHGEPAFLAIRDALMRAP.EPVTLVAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTPNAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLSTLPQLNR....TGKMLHALFSHYRSGS.MQSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLGKPANVQVALDLDVKGFQQWVAEVLALAS... : CCU53861

                  : 2---------12--------22--------32--------42--------52--------62--------72--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------221-------231-------241-------251-------261-------271-------281-------291-------301-------311-- :
OrigSeq           : AKKIILDCDPGLDDAVAILLAHGNPEIELLAITTVVGNQTLAKVTRNAQLVADIAGITGVPIAAGCDKPLVRKIMTKNKVDERHAVNLIIDLVMSHEPKTITLVPTGGLTNIAMAARLEPRIVDRVKEVVLMGGGYHEGNATSVAEFNIIIDPEAAHIVFNESWQVTMVGLDLTHQALATPPILQRVKEVDTNPARFMLEIMDYYTKIYQSNRYMAAAAVHDPCAVAYVIDPSVMTTERVPVDIELTGKLTLGMTVADFRNPRPEHCHTQVAVKLDFEKFWGLVLDALERIGDPQ :OrigSeq
cons              : --EEEE-------HHHHHHHHH-----EEEEEEEE-----HHHHHHHHHHHHHHHH--------------HHHHHHH------HHHHHHHHHHHH-----EEEE-----HHHHHHHH---HHHH--HEEEEE-------------EEEE----HHHHHHHH---EEEEEE-----------HHHHHHHHH----HHHHHHHHHHHHHHHHH-------------EEEEE----------EEEEEEE--------EEEEE---------EEEEEE--HHHHHHHHHHHHHHH---- :cons
dsc               : ---EEE-------HHHHHHHHH-----EEEEEEEE-----HHHHHHHHHHHHHHH-------------HHHHHHHHHHHH---HHHHHHHHHHH------EEEE--------EE---------HHHHHEEEE-------------EEEE----HHHHHHHH----EEEE-------------HHHHHHH-----HHHHHHHHHH---HHHHHHHH----------EEEE----------EEEEEEE--------EEEEE---------EEEEEE--HHHHHHHHHHHHHHH---- :dsc
mul               : -EEEEE-------HHHHHHHHH------EEEEEEE------------HHHHHHHH----E-EE--------HHHHHHHH---HHHHHHHHHHHHH-----EEEEE------EHH-HH-----HHHHHEEEEE-------------HH--------HHEEE----EEEEE-------HHH----HHHHHH------HHHHHHHHHHHH-----------------HHH-E----------EEEEEE--------EEEEEE---------EEEEEE-----HHHHHHHHHHHH---- :mul
nnssp             : --EEEE-------HHHHHHHHH------EEEEEEE-----HHHHHHHHHHHHHHH------EE-------HHHHHHH------HHHHHHHHHHHH-----EEEEE-----HHHHHHH----------EEEEE----------------EE---HHHHHHHH----EEEE-----------HHHHHHHHHH---HHHHHHHHHHHHHHHH----------------EEEE----------EEEEEE---------EEEEE----------EEEEE--HHHHHHHHHHHHHHHHH-- :nnssp
phd               : --EEEE-----HHHHHHHHHHHH----EEEEEEEEE-----HHHHHHHHHHHHHHH--------------------------HHHHHHHHHHHHH-----EEEE----HHHHHHHHH---HHHH--EEEEEE-------------EEEE---HHHHHHHHH---EEEEEE-----------HHHHHHHHH----HHHHHHHHHHHHHHHHH-------------EEEEEE----EE-EEEEEEEEE-------EEEEEE---------EEEEEE--HHHHHHHHHHHHHHH---- :phd
pred              : ---EEE-------HHHHHHHHH-----EEEEEEE--------HHHHHHHHHHHHHH-----------------------------HHHHHHHHHH-----EEEE-----HHHHHHHHH--HHHHHHHEEEEE--------------EEEE----HHHHHH----EEEEEE------EEE-HHHHHHHH------HHHHHHHHHHHHHHHH--------------EEEEE-----------EEEEE---------EEEEE---------EEEEEE---HHHHHHHHHHHHH----- :pred
zpred             : -EEEEEEEE--HHHHHHHHHHH--HHHHHHEEEEEE-----EEE-HHHHHHHEH-----EEEEEHH--EEHEHHHHHHHHH--HHHHHHHHHHH-----EEEEEEE---EEEEEEHHHHHHHHHHHEEEEEEEE----------HHHEHHHHHHHHHHHHH----EEEEEHHHHHEE-----HHHEHH--------HHHHHHHHHH--------------EEEEHEEEEEE---------EEEEH--------EEEEEE--------EEEEEEEE-----HHHHHHHHHHH---- :zpred


access            : E-EBBBEBEEE-EEBBBBBBBBB-EEBEBBBBBBBBBE-EBEEBBEEBBBBBEBBEEEBBBBBBEBB-EBBEEBBBBBEBEBEBBBBBBBEBBBE-EEEEBBBBBBBEBBBBBBBBEB-EEBEEEBEBBBBBBBB-BBBEB-BBBEBBBBBEEEBBEBBBEBBBEBBBBBBEBBBEBBBEBEBBEBBEEBEEEBBEBBBEBBEBBBEB-EEEBBBBBBBBBEBBBBBBBBEEEBBEB-EBBBBBEBEEE-BEE-BBBEBB--EEEEBEBBBBBEBEBEBBBEBBBEBBEEBBEEE : access

PHD Rel           : 9759861887557999999998444541799998324678424478999999998128852025677521111122221353257779999998728995589748947599999851872542135788781466546775422123125834575112348449998555563222564156798763686246899999998764331144467455654226776415640111136899841466476377752267789975378732262478899999999973699 : PHD Rel
Pred Rel          : 0056668099907767077786877666666556669986555787789999888668776686988886566558677667988858799878889998099968997688779886995688887700569997999998766559650907087677689759880766665786787788877867999787777999888877667786607878886666666099087666665687677976877777766799999906669965676567888999986679000 : Predator Rel


dssp              : --EEEEEE---HHHHHHHHHHH-----EEEEEEE------HHHHHHHHHHHHHHH------EEE--------------------HHHHHHHHHH------EEEEE----HHHHHHHHH--HHHHH--EEEE---------------HHHHH-HHHHHHHHH----EEE--HHHH---EE-HHHHHHHH----HHHHHHHHHHHHHHHHHHHH-----EE--HHHHHHHHH-HHHEEEE---EEE----------EEE-----------EEEEEEE-HHHHHHHHHHHHHHH---- :dssp
define            : EEEEE-----HHHHHHHHHHHHHH-EEEEEEEEEE----HHHHHHHHHHHHHHHHH-EEEEEEEEEEE----------EEEE-HHHHHHHHHHHHH---EEEEEEE--HHHHHHHHHHHHHHHHHH-EEEE--------------HHHHHHHHHHHHHHHHH-EEEEEEHHHHHHHH--HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH--EEEE-HHHHHHHHHHH-------EEEEEEEE--------EEEEE-----EEEE--EEEE-HHHHHHHHHHHHHHHH---- :define
stride            : --EEEEEE---HHHHHHHHHHHH----EEEEEEE------HHHHHHHHHHHHHHH------EEE--------------------HHHHHHHHHHH-----EEEEE---HHHHHHHHHH-HHHHHH--EEEEE--------------HHHHH-HHHHHHHHH----EEEE-HHHHH--EE-HHHHHHHHH---HHHHHHHHHHHHHHHHHHHH-----EE--HHHHHHHHH-HHHEEEE---EEEE--------EEEE-----------EEEEEEE-HHHHHHHHHHHHHHH---- :stride


Q3 values for 1masb-1-AUTO.1  View SS in Rasmol

	dssp	define	stride
phd	78.31	69.49	80.34
dsc	69.83	60.68	69.15
pred	78.98	66.78	78.31
mul	67.80	60.00	68.47
nnssp	76.27	65.42	76.27
zpred	65.08	62.03	65.42
cons	76.27	67.46	76.27