Results for 1mdaj-1-GJB


1mdaj-1-GJB    : PGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQNEA : NRL_1MAEH
NRL_1MAEH      : PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGADQDQSTVELGSGPQVLSVMNEA : MYMMAU1
MYMMAU1        : PASDSKRVYVLDPGNFHMTSTVYTIDGKSSKLLGMTDAGKLPNVMVASDGKFLAIANTMYSRVARGKRDDYLELIDTKTHQPIADIDIPEG.RFLTGVFERTAGLSVDDKHLLFQQFSPSPGVGLVDLQQKFVKIMNVPDCYHIFPTANQNFFMHCRDGSLMQFTYSKGNTKQKPTKIFHAEKEYLLNNPYYSNSNNHLTWPTYEKIFQAKLSESGAEFLKPIEVFTDKEKADKWRPGGWQTIAFHKARNELYLLADQRKWTHKLPSRFVFVVDATSGKRLRRIELKHEINSIAVSQDDKPYLYAVSEEAKTLFTFDAVNKALSSIDELGRAPSMIFIADK. : MTBFRA2
MTBFRA2        : APINARRVFVYDPKHFAAISQFYMIDGDTARVVGTADGGFLSNPVVASDGSFFGQASTVYERIARGKRTDYVELLDPQTNNPIADIELPNSPRFLVGTYPWMTALTPNNKTLLFYQFSPQPAVGVVDLAGKFDRMIEVPDCYHIFPSSNDTFFMHCRDGSLLKVGIADGKSQTKRTEIFHKENEYLINHPAYSPKSGRLVWPTYTKIFQIDLSSQDAKFLPAIEAFTDAEKKEGWAPGGWQQVAYHRESDRIFLLGDQRASKHKAPSRFLFVIDAKTGKRINKIELKHEIDSVGVSQDAKPQLYALSTGDKALYIFDPETKEVSSVNQLGAGPQVVMTSDM. : A36934
A36934         : PAPDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQREWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATEELRSVDQLGRGPQIITTHDMD : DHMH_PARDE
DHMH_PARDE     : PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQREWRHKTASRLLVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESEELRSVNQLGHGPQVITTADMG : ITR1_MOMCH

               : 27--------37--------47--------57--------67--------77--------87--------97--------107-------117-------127-------137-------147-------157-------167-------177-------187-------197-------207-------217-------227-------237-------247-------257-------267-------277-------287-------297-------307-------317-------327-------337-------347-------357-------36 :
OrigSeq        : PGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQNEA :OrigSeq
cons           : ------EEEEE---------EEEEEE----EEEEE---------EE------EEEEHHHHHHHH------EEEEE------------------EE----EEEE-------EEEEEE-------EEE--------------EEEE------EEEEE-----EEEEE-----------EEE--HHHHHH-----------EEEEEHHHHHHH------HHH--HHHHHHHHH----------EEEEE-----EEEEEE--HHHHHH---HEEEEEE-----------------EEEE-------EEEE----EEEEEE----HHHHHHHH------EEEE---- :cons
dsc            : --------EE-----------EEEE-----EEEEE----------------------HHHHHHHH-----EEEE-------------------------EEE--------EEEE---------EEEEE------------EEEE-------EEEE------HHHHHHHHHHHHHHHHHH--HHHHHHHHHH-------EEEEEHHHHHH----HHHHH---HHHHHHHHHHHHH-----HHHHH------EEEEEHHHHHHHHHHHHHHEEEEEE----------------EEE-------HHHHH------EEE----HHHHHHHHHH-----EEEE---- :dsc
mul            : -------EEEE----HHHHHHEEEE------EEEE-----------------HHHH----HHH--------EEEE--------HH--------EEE-----EE---------EEEH-------EEEHH--H-H-HH-----EEE-------EEEE-----HH--H---------HHHHHHHH--HH------------EEE----EE-HHHH------HHHHHHHHH-----------------H------EEEE-HHHHHHHHH--H-EEEE-HH--------HHHH-------------EEEEE-----EEEEH-H----------------EEEE---- :mul
nnssp          : ------EEEEE---------EEEEE------EEE----------EE------HHHHHHHHHHHH------EEEE-------------------EE----------------EEEEE-------EEE----------------EE------EEEEE-----EEEEE-----------EEE-------------------EEE----HHHHH-------HHHHHHHHHHHHH-----------EEEE------EEEEE------------EEEEEE-----------------EEEE-------EEEE-----EEEEE-----HHHHHHH------EEEE---- :nnssp
phd            : ------EEEEE--HHHHH-EEEEEEE----EEEEE---------EE------EEEEHHHHHHHH------EEEEE----------E------EEE---EEEEE-------EEEEEEE-----EEEE-------EEE----EEEE------EEEEEE----EEEEE-----------EEEEHHHHHHH----------EEEEEHHHHHHHH------HHH--HHHHHH-------------EEEEEE----EEEEEE--HHHHHH---EEEEEEE------E-HHH-------EEE--------EEE----EEEEEE----HHHHHH-------EEEEEE--- :phd
pred           : ------EEEEE----------EEEEE----EEEE---------EEE-----EEEEEHHHHHHHH-----EEEEEE------------------------EEEE-------EEEEEE-------EEEE--------------EEE------EEEEE---------------------EEE-------------------EEEEE---EEEE-----HHHHHHHHHHHHHHHHH--------EEEEE------EEEEEHHHHHHHHHHHHHHEEEE------------------EEEE------EEE-----EEEEEE---------EEE-------EEE---- :pred
zpred          : ----EEEEEEE----HHHHHEEEEE-----EEEEEE------EEEEHH--HHHHHHHHHHHHHH-----EEEEEEE-----EEEEEEE-----EEEE----EEE------EEEEEEE-----EEEEEHHHHHHEEE----EEEEE------EEEE----HHEEEEHHH------HHHHHHHHHHHH-----------EEEEE---EEEEEE---HHHHHHHHHHHHHHHHHH--------EEEEE-----EEEEEHHHHHHHH--HHHHEEEEHHHHHH---HHHHHHHHHHHEEEE----EEEEHHHHHHEEEEHHHHHHHHHHEEE-----EEEEEE--- :zpred


access         : EEEEBEEBBB-BEB-BBBBBEBBBBEEEBBEBBBBB-B--BBEBBBBEEBEBBBBBBBBBB-BBEEEE-E-BEBBEEB-BBBBBEBEBEE--EBBBBBBBBBBBB-EE-EEBBBB-BBE-EBBBBB-BEEE-EEBBEB-EBBBBBEEBEEBBBBBB-EEEBBEBBBBEEEEEBEBBEBBBEEEE-BBE--B-BEEEE-BBBEBBBEBBEBEBEEEEBEB-BBBEBBEEEEEEEE--EEEBEBBBBBEE-EEBBBBBEEEEEE-EBBBEBBBBBBBE-EEEB-EBEBEEEBEBBBBBEEEEE-BBBBEEE-EBBBBBEB--EEBEBBEEBEE--EBBBB-EEE : access

PHD Rel        : 998674477527314432113577736863588612568668743315764113221478988625876568982786212333103799853211552454327878521354352588725665145576433246745644268763578851786320232126887666412231123344127531488972664025466531232212211004677532355787788872233444136647886131345421243157888514674212222365444142145885121344148637775142111221231159997488774289 : PHD Rel
Pred Rel       : 008707590908970566588598688997687578980089666869990656658888878667750689990900068980080999997666887765877999766879557899980687777766655569090667799997607868977656686668779667555655777788589987799986709666666665767667853377866776668757999996570879867750899657777899858788889767666885778677765566967007765665799966797678879777550788999875559000 : Predator Rel


dssp           : ------EEEEEE-HHH---EEEEEEE----EEEEEEEE----EEEE------EEEEEEEE-------EEEEEEEE------EEEEEEE-------E------EEE------EEEEE-----EEEEEE---EEEEEEE-------EEEE--EEEE-------EEEE--------EE----------E----EEE----EEEE-E----EEEE------EE---------HHHH--EEE-----EEEE----EEEEEEEE--------EEEEEEEE-----EEE--EEEEEE-EEEE------EEEEEE----EEEEEE----EEEEE--------EEE----- :dssp
define         : E-----EEEEEEE-------EEEEEE---EEEE-EEEE---EEEE--------------------EEEEEEEEEE--------EEEEE----EEEE--------------EEEEEEE----EEEEEE-------EEEEE--EEEEE-------------EEEEEEE---EEEEEEEEEEE---EEEEEEEEEE---EEEEEEEE--EEEE----EEEEEEEEEEE-HHHHHHHH---------------EEEEEEEE------EEEEEEEEEE--------EEEEEE-EEEE--------EEEEEEE----EEEEE---EEEEEEEEE------EEEE---- :define
stride         : ------EEEEEE-HHH---EEEEEEE----EEEEEEEE----EEEE------EEEEEEEE-------EEEEEEEE------EEEEEEE-------E------EEE------EEEEE-----EEEEEE---EEEEEEE-------EEEE--EEEE-------EEEE--------EE----------E----EEE----EEEE-E----EEEE------EEE--------HHHHH-EEE-----EEEE----EEEEEEEE--------EEEEEEEE-----EEE--EEEEEE-EEEE------EEEEEE----EEEEEE----EEEEE--------EEEE---- :stride


Q3 values for 1mdaj-1-GJB  View SS in Rasmol

	dssp	define	stride
phd	61.40	53.80	61.11
dsc	47.08	50.88	47.37
pred	62.57	56.73	62.57
mul	54.39	51.46	54.39
nnssp	64.91	58.77	64.91
zpred	54.68	50.00	54.68
cons	61.70	57.02	61.40