Results for 1mdta-1-AS


1mdta-1-AS    : GADDVVDSSKSFVMENFSSYHGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGGVVKVTYPGLTKVLALKVDNAETIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSLPFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYEYMAQACA : DTX_CORBE
DTX_CORBE     : GADDVVDSSKSFVMENFSSYHGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGGVVKVTYPGLTKVLALKVDNAETIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSLPFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYEYMAQACA : DTX_COROM
DTX_COROM     : GADDVVDSSKSFVMENFSSYHGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGGVVKVTYPGLTKVLALKVDNAETIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSLPFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYEYMAQACA : SYNDABILB
SYNDABILB     : GADDVVDSSKSFVMENFSSYHGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGGVVKVTYPGLTKVLALKVDNAETIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSLPFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYEYMAQACA : SYNDABILC
SYNDABILC     : GADDVVDSSKSFVMENFSSYHGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGGVVKVTYPGLTKVLALKVDNAETIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSLPFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYEYMAQACA : XXU11006
XXU11006      : GADDVVDSSKSFVMENFSSYHGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGGVVKVTYPGLTKVLALKVDNAETIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSLPFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYEYMAQACA : XXU11007
XXU11007      : GADDVVDSSKSFVMENFSSYHGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGGVVKVTYPGLTKVLALKVDNAETIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSLPFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYEYMAQACA : XXU11008
XXU11008      : GADDVVDSSKSFVMENFSSYHGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGGVVKVTYPGLTKVLALKVDNAETIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSLPFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYEYMAQACA : XXU11009
XXU11009      : GADDVVDSSKSFVMENFSSYHGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGGVVKVTYPGLTKVLALKVDNAETIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSLPFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYEYMAQACA : XXU11010
XXU11010      : GADDVVDSSKSFVMENFSSYHGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGGVVKVTYPGLTKVLALKVDNAETIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSLPFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYEYMAQACA : XXU11011
XXU11011      : GADDVVDSSKSFVMENFSSYHGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGGVVKVTYPGLTKVLALKVDNAETIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSLPFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYEYMAQACA : SYNDABILA
SYNDABILA     : GADDVVDSSKSFVMENFSSYHGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGGVVKVTYPGLTKVLALKVDNAETIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSLPFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYEYMAQACA : DTXH_CORBE
DTXH_CORBE    : GADDVVDSSKSFVMENFSSYHGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGDVVKVTYPGLTKVLALKVDNAETIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSLPFAEGSSSVEYINNWEQAKALSVKLEINFETRGKRGQDAMYEYMAQACA : APA1_HUMAN

              : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181---- :
OrigSeq       : GADDVVDSSKSFVMENFSSYHGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGGVVKVTYPGLTKVLALKVDNAETIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSLPFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYEYMAQACA :OrigSeq
cons          : ----EE----EEEEEE-----------EEHHHHH-------------------E-----------EE------------EEEEE-----EEEEEE---HHHHHHHH-----HHHHHH--HHHHHHHH----EEEEEEEE-------EEEEH-HHHHHHHHEEEEEEE-------HHHHHHHHHHHH- :cons
dsc           : -----------EEEEE----------EEEHHHH-----------------EEEE----------EEE-----------EEEEEE------EEEEE---HHHHHHH-------HHHHH---HHHHHHH-----EEEEEE----------HHHHHHHHHHHHEEEEEEEE------HHHHHHHHHH--- :dsc
mul           : -----------EEEH------------EEEEEE-----------------H----------------------------EEEE-----H---HHHHH---HHHHHHH----HH-HHHHHHHHHHHH------EEEEEE--H------E-------HHHHHHHHHHHHH-------HHHHHHHHHHHH :mul
nnssp         : -----------EEE-------------HHHHH-----------------------------------------------EEEEE-----EEEEEE---HHHHHHHH-----HHHHHHH--HHHHHHH-----EEEEEE--------HHHHH-HHHHHHHHHHEEE---------HHHHHHHHHHHHH :nnssp
phd           : ----EE----EEEEEE-----------EEHHHHH-------------------EEE---------EE------------EEEEE-----EEEEEE---HHHHHHHH-----HHHHHH--HHHHHHHH----EEEEEEEE-------EEEE--HHHHHH-EEEEEEEE-------HHHHHHHHHHHH- :phd
pred          : ----EEE--EEEEEE-------------HHHHHHH------------------------EEEE-EEEEE---------EEEEEEE----HHHHHH---HHHHHHHH-----HHHHHHHHHHEEEE------EEEEEEEEE-----EEEEEHHHHHHHHHHHHHHHHH-------HHHHHHHHHH--- :pred
zpred         : -HHEEHHHHH-EEEHHH---------EEEEEEEEEE--------------EEEE-----EEEEEEEEE----------EEEEEEE--HHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----EEEEEEEEHHH----EEE--HHHHHHHHHHHHHHHHHH-------EHHHHHHHHHH :zpred


access        : EEEEBBEBBEEBBBEBBBE-EEEEEE-BEBBEEEBEEEEEEEEEE-EEEBEEB-E-EEE-EBBB-BBEEEEEBEEEBEEBBEBBBEEBBEBBBBEBEEBEEBEEEBBBEBBEEBBEEBBEEEBBEEBEEEBB-BBBBBEBBEEEEBBEBBEE-EEBEEBBBEBEBEBEBEEEEBEEBBBEBBBEBBE : access

PHD Rel       : 9883114786148987135789997531236640526786776787733232032134244453032357887656795799981775238788447659998774431144658751659999997589827999974245797155545568975221567899626786317999999999649 : PHD Rel
Pred Rel      : 0077750708767088709998999885560677609009988780989985868999087878780800099999086900909990087890569960799994006085688856798775086889868900066889990669677699799994487066589999990609900777000 : Predator Rel


dssp          : -HHH-EEEEEEEEEE--EEEEEE------HHHH--------------HHH--EEEE--HHHHH---E---------E-EEEEEE---EEEEEEE----HHHHHHH--------HHHH---HHHHHHH-----EEEEEEE-------EEEEE---HHHH-EEEEEEE-HHH-----HHHHHHHHH--- :dssp
define        : -----------EEEEEEEEEEEEEE-HHHHHHHEEEE--------------EEEE--HHHHHHHHH--------EEEEEEEEEEEEEEEEEEEEE--HHHHHHHHHH-----HHHHHHHHHHHHHHH-----EEEEEE------EEEEEEEEHHHHHEEEEEE-------EEEEHHHHHHHHHHHHE :define
stride        : -HHH-E-HHH-EEEE--EEEEEE---HHHHHH---------------HHH--EEEE--HHHHHH--E---------E-EEEEEE---EEEEEEE----HHHHHHHH-------HHHHH--HHHHHHHH----EEEEEEE-------EEEEE---HHHH-EEEEEEE-HHH----HHHHHHHHHHH-- :stride


Q3 values for 1mdta-1-AS  View SS in Rasmol

	dssp	define	stride
phd	74.33	65.78	73.26
dsc	70.59	64.17	68.98
pred	60.96	55.61	58.29
mul	56.68	52.41	57.22
nnssp	67.38	65.24	70.59
zpred	52.41	51.87	55.08
cons	72.19	65.24	71.12