Results for 1mjc-1-DOMAK


1mjc-1-DOMAK    : SGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL : CSPF_STRCO
CSPF_STRCO      : ..MASGTVKWFNSEKGFGFIAQDGGGPDVFAHYSNINAQGYRELQEGQAVTFDITQGQKGPQAENITPA : PAU82822
PAU82822        : SNRQNGTVKWFNDAKGFGFITPESG.NDLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQKGLQADEVQVV : BCCSPBGEN
BCCSPBGEN       : ...MNGKVKWFNNEKGFGFIEMEGS.EDVFVHFSAIQSDGYKALEEGQEVSFDITEGNRGPQAANVAKL : BCCSPAGEN
BCCSPAGEN       : .MTVTGQVKWFNNEKGFGFIEVPGE.NDVFVHFSAIETDGFKSLEEGQKVSFEIEDGNRGPQAKNVIKL : AB003336
AB003336        : ATGVEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNLRSVGDGEVVEFDVVEAAKGSEAANVTGP : BCCSPCGEN
BCCSPCGEN       : ...MQGRVKWFNAEKGFGFIEREDG.DDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQAANVVKL : D63344
D63344          : SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVVTL : CSPB_ECOLI
CSPB_ECOLI      : SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVIIT : CLU43513
CLU43513        : ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNLRSVGDGETVEFDVVEGEKGAEAANVTGP : CSPE_ECOLI
CSPE_ECOLI      : .SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVIAL : PFU62985
PFU62985        : SQRQSGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKGMQA...... : CELF46F115
CELF46F115      : TTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSALRTLGDDEEVLFDLVEGKNGPEAANVTGP : JQ1061
JQ1061          : GERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNGPDGAPVQGN : CEF02E92
CEF02E92        : TPRYFGSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNGREAYAVSGE : LPCSPLGEN
LPCSPLGEN       : ..MKNGTVKWFNADKGFGFITGEDG.TDVFVHFSAIQTDGFKTLDEGQKVTYDEEQGDRGPQATNVQPQ : CSPF_ECOLI
CSPF_ECOLI      : SRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLRGPSAANVYLS : DJYBOX
DJYBOX          : HTGITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNRKSVGEGEEILFDIVKGAKGNEAANVSAI : SMU39883
SMU39883        : EERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNQRSLQEGEEVEFYVVEGDKGDEASEVTGP : A49594
A49594          : RNEGFGNSEMVNVRNGYGLMNRNDTKEDVFVHQTAIKKNNLRSVGDGETVEFDVVEGEKGAEAANVTGP : YBFH_APLCA
YBFH_APLCA      : ASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNLRSVGDGEKVEFDVVEGEKGNEAANVTGP : JC4588
JC4588          : GPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGEY..VPVEGDEVTYKMCPIPPKFQAVEVVLT : GRP2_NICSY
GRP2_NICSY      : .QRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGPDGAAVQGG : LMU90213
LMU90213        : ..MQTGTVKWFNSEKGFGFIEVEGG.DDIFVHFSAIEGEGFKTLDEGQSVEFEIVEGQRGPQAEKVTKL : SAU70990
SAU70990        : ..MATGTVKWFNDAKGFGFITQDGGGEDVFCHHSAINMDGFRTLQEGQKVEFEVTRGPKGLQAQNVRSI : CSP_ARTGO
CSP_ARTGO       : ..MAQGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQATGVTLV : MTY15C103
MTY15C103       : ..MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQATGVRSL : CSPD_ECOLI
CSPD_ECOLI      : ..MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPV : CSPD_HAEIN
CSPD_HAEIN      : ..MEIGIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSHATKIIPI : APE_CAVPO

                : 2---------12--------22--------32--------42--------52--------62------- :
OrigSeq         : SGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL :OrigSeq
cons            : ------EEEEEE-----EEEE------EEEEEEEEE------------EEEEEEE--------EEE--- :cons
dsc             : ------EEEEEE-----EEEE------EEEEEEEEE------------EEEEEEE--------EEE--- :dsc
mul             : -------EEEE-------EE-------HEEEEE----------------EEEEE--------------- :mul
nnssp           : ------EEEEEE-----EEEE-------EEEEE---------------EEEEEE------------EE- :nnssp
phd             : -----EEEEEEE----EEEEEE-----EEEEEEEEEE-----E-----EEEEEEEE-------EEE--- :phd
pred            : --------EEEE---------------EEEEEE---------------EEEEEEE-------------- :pred
zpred           : -----EEEEEEE-----EEEE-----HHHHHHHHHH---------HHHHHHHHH--------EEEEE-- :zpred

access          : EEEBEBBBEBBEBEEBBBBBBEEEEEEEBBBBBBBBEEEBBEBBEEEEEBEBBB-EEEEEEEBBEBEEE : access

PHD Rel         : 964315787755247708887277975399999876517631135673599998636767741444179 : PHD Rel
Pred Rel        : 009777768007999977708799998889655666799965577997558886689999999888000 : Predator Rel

dssp            : ---EEEEEEEEE----EEEEEE------EEEEHHHE------------EEEEEEE------EEEEEEE- :dssp
define          : -EEEEE------------EEEE----EEEEEE---------------EEEEEEEEE---EEEEEEEEEE :define
stride          : ---EEEEEEEEE----EEEEEE------EEEEHHHE-----------EEEEEEEE------EEEEEEE- :stride

Q3 values for 1mjc-1-DOMAK  View SS in Rasmol

	dssp	define	stride
phd	81.16	60.87	79.71
dsc	81.16	60.87	79.71
pred	66.67	60.87	65.22
mul	66.67	59.42	65.22
nnssp	78.26	60.87	76.81
zpred	66.67	44.93	66.67
cons	81.16	60.87	79.71