Results for 1nar-1-DOMAK


1nar-1-DOMAK    : PKPIFREYIGVKPNSTTLHDFPTEIINTETLEFHYILGFAIESYYESGKGTGTFEESWDVELFGPEKVKNLKRRHPEVKVVISIGGRGVNTPFDPAEENVWVSNAKESLKLIIQKYSDDSGNLIDGIDIHYEHIRSDEPFATLMGQLITELKKDDDLNINVVSIAPSENNSSHYQKLYNAKKDYINWVDYQFSNQQKPVSTDDAFVEIFKSLEKDYHPHKVLPGFSTDPLDTKHNKITRDIFIGGCTRLVQTFSLPGVFFWNANDSVIPKRDGDKPFIVELTLQQLLAA : S49848
S49848          : PKPIFREYIGVKPDSTTLDDFPPEIIKTDTLEFHFILGFATEKYNQKGNGTGNFEESWRDEFFGPDKVKILKIKHPEVKVVISIGGRDVETPFDPAEQYVWVWKAVKSLKVIIQKYKNESGNLIDGIDINYEYIKSDELFVNCISQVITELKNDDDLNIQVVSIAPSENNASSYLNLYNANPDYINLVDYQFSNQLNPVSTEDAFVDIYKSLVKDYFTHKVLPGFSTDPLDNTNTKITRDIFIGGCTKLKQNSSLPGVFFWNANDSNN....GDKPFKVELTLQQLLAK : VPNARBN
VPNARBN         : PKPIFREYIGVKRDSPTLHDFPSEIIGTENLEFHFILGFATENYNQARKGTGTFEESWDSESFGLENVKKSKERYPEVKVVISIGGRGVQTPFHPAEENVWVENAQESLKQIFQKYSNENGSMIEGIDINYEHISSDEPFARLVGQLITELKKDDDLNINVVSIAPSETNSSHYQKLYNAKKDYINWVDYQFSNLHKPVHKDDDFVQIFKTVEKDYHLRKVLPGFSTDPDDAKHNKITRDVFIGGCTRLKQTSSLPGVFFWNAHDSVTPRLDGDKPFIVELSLQQLLAK : RUAP_SOYBN
RUAP_SOYBN      : KFKVFREFTSD..DS.....FLNQVIPENITEFQVTLSLARD.YDGNNSTNGKFIPYWDTEKVTPEVIKKFKKKYERVKVLVSIGNKNKQFPFTISDSNAWVSEATASLKSIIKTYN......LDGIDVSYEDIAANADFVNSVGGLVRNLKQNKLITVASFATSADAANNKFYYAEYATFFDFLSWVGFTPS.RANPVASLEEKILAVANEYKAVKA..FLVAYSTVAEDWAN..FSPPIFFITLHGLLGNSAVKGASIKVISDATAS...FPAKWIPEILLLAASK. : S44033
S44033          : PKPIFREYIGVKPNSETLHDFPHEIIDTENLEFHFILGFATESYYESGKSTGNFEESWDVELFGPENVKNLKTKHPEVKVVISIRGHDDKTPFDPDEENIWVWKAVKSLKQIIKKYRNESGNMIDGIDINYEHINSDELFVNCIGQVIRELKKDDDLNIDVVSIAPSENNQSSNQKLYNANTDYINWVDYQFSNQVKPVTTVDAFVDIYNSLVKDYDAGKVLPGFNTEPLDIKDTKTTRDTFIRGCTKLLQTSSLPGVFIWNANDSVIPQRDDDTPFIVELKLQQLLAK : DAPA_ECOLI

                : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------221-------231-------241-------251-------261-------271-------281------ :
OrigSeq         : PKPIFREYIGVKPNSTTLHDFPTEIINTETLEFHYILGFAIESYYESGKGTGTFEESWDVELFGPEKVKNLKRRHPEVKVVISIGGRGVNTPFDPAEENVWVSNAKESLKLIIQKYSDDSGNLIDGIDIHYEHIRSDEPFATLMGQLITELKKDDDLNINVVSIAPSENNSSHYQKLYNAKKDYINWVDYQFSNQQKPVSTDDAFVEIFKSLEKDYHPHKVLPGFSTDPLDTKHNKITRDIFIGGCTRLVQTFSLPGVFFWNANDSVIPKRDGDKPFIVELTLQQLLAA :OrigSeq
cons            : ----EEEEEE-------------EEE-----EEEEEEE----------------------------HHHHHH-----EEEEEEE----------------EHHHHHHHHHHHHHHE------------E---------HHHHHHHHHHHHH------EEEEEEE--------HHHHHHH--HH--EEE-E-----------HHHHHHHHHHHHH-------------------------EEEEE--EEEEE------EEEE---------------EEEHHHHHHHH-- :cons
dsc             : ------EEE-----------------------EEEE-----------------------------HHHHHHH-----EEEEEEE-----------------HHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHHH-----EEEEEEE---------HHHHH-------EEEEE--------------HHHHHHHHHH------------------------EEEEE--------------EEEE---------------EEEHHHHHHH--- :dsc
mul             : ---HHHHE---------------HHH-----HHHHHHHHHH-------------------HHH-HHHHHHHH-----EEEEEEE---------------HHHHHHHHHHHHHEEE-----------EEE---------HHHHHHHHHHHHHH----H-EEEEEE-----------E-------EEEEEEE------------HHHHHHHHHHHHHHH---H------------------EEEE---------------EEE----------------EHHHHHHHHHHH :mul
nnssp           : ----EEEEE-----------------------EEEEEE----------------------------HHHHHHH-----EEEEEE---------------EEEHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHH-----EEEEEEEE---------HHHHH--------EE-EE----------HHHHHHHHHHHHH--------------------------EEE--------------EEEE---------------EEEEEHHHHHHHH :nnssp
phd             : ---EEEEEEEE------------EEE----EEEEEEEEE---HHH----------E----E-----HHHHHH----EEEEEEEE----------------HHHHHHHHHHHHHHEE------------E-HHH-----HHHHHHHHHHHHH-------EEEEEE-------HHHHHHHH--HHHEEEE-------------HHHHHHHHHHHH-------EE-----------------EEEEEEEEEEEE------EEEEE--------------EEEHHHHHHHH-- :phd
pred            : ----EEEEEE-------------EEE-----EEEHHHHH---------------------------HHHHHHH----EEEEEEE---------------EEEHHHHHHHHHHHHH-----------EEEEEEE-----HHHHHHHHHHHHHH-----EEEEEEE--------HHHHHHHHHHH--EEE----------------EEEEHHHHHH-----------------------EEEEEEE--EEEEE------EEEE---------------EEEEHHHHHH--- :pred
zpred           : ---EEEEE---------------HHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHEEEEEE------------HHHHHHHHHHHHHHHEEEE--------EEEEEEEEEE---HHHHHHHHHHHEEHHHHHHHHEEEEEEEE---------EEEEE----EEEEE----------EE-HHHHHHHHHHHHHHHHH-EEEEEE----HHHH----EEEEEE------EEE-----EEEE---------------EHHHHHHHHHHHH :zpred


access          : EEE-BEEBBE-EEEEEEBEEBBEEBBEEE-BEBBBBBBBBBEE-EEEEEEEEEBEE-BEBE-B-EEEBEEBEEE-EEBEBBBBBE-EE-E-E-EEEEE-BBBBEB-EBBEEBBEE-EEEEEEBBEBBEBBBEBBEEEEBBBEBBBEBBEEBEEEEEB-BBBBBBB-EEEEEEBBBEB-EB-EEBBBBBEB-BEEE-EEBBE-EBBBEBBEEB-EE-EBBEBBEEBB-EE-EEEEEEBB-EBBBBBBBEB-E-BEBEBBBBBBBEEEBBEEEEEEEEBBBEBBBEEB-EE : access

PHD Rel         : 9956887732177876765445225346311221113211211211578888741214531379413588743998279999861887567778763431258999999875311058754521242131432477622578889998775269984325888648768852444543203001212212137887876542468889997541446771431557774566788764327875235533255367168871786788778899743642378898638 : PHD Rel
Pred Rel        : 0086675665009998776099767606765577868555555508999997766776776589767787898099789000969999899990999806987878589999978799999677666655055677976558688898777870076657999089900077687788658668506656867990999779766777786887599786009907997799767656555607786766870099709085999870889999960697897777000 : Predator Rel


dssp            : ---EEEEEE----------------------EEEEEEEEEEEEE-----EEEEEEE---HHHH-HHHHHHHHHH----EEEEEEEE------E-E--HHHHHHHHHHHHHHHHHH-EE--EE---EEEEEE--E-----HHHHHHHHHHHHHH-------EEEE------HHHHHHHHHHH-----EEEEEHHH-------HHHHHHHHHHHHHH-----EEEEEE--HHHHHH----HHHHHHHHHHHHH-----EEEEE-HHHH-----------HHHHHHHHHHH- :dssp
define          : -EEEEEEEE-----------------------EEEEEEE-EEEEE--EEEEEEEEE-------HHHHHHHHHHHH-EEEEEEEEE-------EEEE---HHHHHHHHHHHHHHHHHH-----EEEEEEEEEEEEE---HHHHHHHHHHHHHHHH-----EEEEEEEEE-HHHHHHHHHHHH-----EEEEE---------HHHHHHHHHHHHHHHH---EEEEEEEEHHHHHHHH--HHHHHHHHHHHHHHHH--------HHHHHEEEE------HHHHHHHHHHHHH :define
stride          : ---EEEEEE----------------------EEEEEEEEEEEEE-----EEEEEEE--------HHHHHHHHHH----EEEEEEEE------E-E--HHHHHHHHHHHHHHHHHH-EE--EE---EEEEEE--E----HHHHHHHHHHHHHHH-------EEEE-----HHHHHHHHHHHH-----EEEEEHHH-------HHHHHHHHHHHHHHH----EEEEEE--HHHHHH----HHHHHHHHHHHHHH----EEEEE-HHH------------HHHHHHHHHHH- :stride


Q3 values for 1nar-1-DOMAK  View SS in Rasmol

	dssp	define	stride
phd	64.36	57.79	65.05
dsc	65.05	57.09	66.09
pred	62.63	55.71	63.67
mul	62.63	53.63	62.28
nnssp	66.78	59.17	67.13
zpred	59.17	54.67	58.48
cons	65.74	57.44	66.78