Results for 1ncg-1-AUTO.2


1ncg-1-AUTO.2    : DWVIPPINLPENSRGPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVI : DSC2_BOVIN
DSC2_BOVIN       : RWAPIPCSVPENSLGPFPLFLQQIQSDTAQNYTIYYSISGPGVDKEPRNLFYVERDTGNLFCTASIDRETYPLFELVAFATTPDGYTPEYPLTLVIRIE : CADB_CHICK
CADB_CHICK       : DWVIPPIKVPENERGPFPKNLVQIKSNRDREAKIFYSITGQGADAPPEGIFTIEKETGWMKVTQPLDREHINKYHLYSHAVSENGKPVEEPMEIIVTVT : BOVDMC
BOVDMC           : RWAPIPCSLMENSLGPFPQHVQQVQSDAAQNYTIFYSISGPGVDKEPFNLFFIEKDTGDIFCTRSIDREQYQEFPIYAYATTADGYAPEYPLPLVFKVE : CAD3_HUMAN
CAD3_HUMAN       : DWVVAPISVPENGKGPFPQRLNQLKSNKDRDTKIFYSITGPGADSPPEGVFAVEKETGWLLLNKPLDREEIAKYELFGHAVSENGASVEDPMNISIIVT : CAD2_CHICK
CAD2_CHICK       : DWVIPPINLPENSRGPFPQELVRIRSDRDKSLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDREQIASFHLRAHAVDVNGNQVENPIDIVINVI : CADF_HUMAN
CADF_HUMAN       : AWVIPPISVSENHKR.LPYPLVQIKSDKQQLGSVIYSIQGPGVDEEPRGVFSIDKFTGKVFLNAMLDREKTDRFRLRAFALDLGGSTLEDPTDLEIVVV : CADB_XENLA
CADB_XENLA       : DWVIPPIKVSENERGPFPKRLVQIKSNKEKLSKVFYSITGQGADTPPEGIFRIEKETGWMQVTRPLDREEYEKYVLLSHAVSENGASVEEPMEITVTVI : CAD4_CHICK
CAD4_CHICK       : DWVIPPINVPENSRGPFPQQLVRIRSDKDKEIHIRYSITGVGADQPPMEVFSIDPVSGRMYVTRPMDREERASYHLRAHAVDMNGNKVENPIDLYIYVI : BOVBDSC1
BOVBDSC1         : RWAPIPCSMQENSLGPFPLFLQQVQSDAAQNYTIFYSISGRGVDKEPLNLFFIERDTGNLYCTQPVDREEYDVFDLIAYASTADGYSADFPLPLPIRVE : DSG1_HUMAN
DSG1_HUMAN       : EWIKFAAACREGEDNSKRNPIAKIHSDCAANQQVTYRISGVGIDQPPYGIFVINQKTGEINITSIVDREVTPFFIIYCRALNSMGQDLERPLELRVRVL : I49556
I49556           : GWVWNQFFVIEEYTGPDPVLVGRLHSDIDSGGNIKYILSGEGAG....TIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRDTNRLEPPSEFIVKVQ : XLMRECAD
XLMRECAD         : DWVIPPIIVSENEKGPFPKRIVQIKSSYAKEVKVYYSITGQGADTPPEGVFAIGREDGWLNVTRPLDREAIDNYVLFSHAVSSNGANVEDPMEVIIKVQ : I46536
I46536           : TWTLEPVHLAENLKVPYPHHLAQVHWSGGD...VHYRLE....SQPP.GPFDVDT.EGKLYVTGELDREAQEQYVLQVQAQNSRGEDYAEPLELHVVVT : BSU61755
BSU61755         : AEGQWTYLNKESQRDPFTRRLKVVKIHSEDPTTVTYDISGDFGTK.....FDIDHESGQIWQVEAVDRETKDRYTITATSADANGNPTEDPVRFDIVVT : G02678
G02678           : GWVWNQFFVLEEHMGPDPQYVGKLHSNSDKGGSVKYILTGEGAG....TIFIIDDTTGDIHSTKSLDREQKTHYVLHAQAIDRRTNKLEPESEFIIKVQ : S38673
S38673           : AWITAPVALREGEDLSKKNPIAKIHSDLAEELKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREETPFFLLTGYALDARGNNVEKPLELRIKVL : DSG3_HUMAN
DSG3_HUMAN       : EWVKFAKPCREGEDNSKRNPIAKITSDYQATQKITYRISGVGIDQPPFGIFVVDKNTGDINITAIVDREETPSFLITCRALNAQGLDVEKPLILTVKIL : I50116
I50116           : DWVIPPVNVLENSRKQFPEELVKIQSDKDKSNTLRYSVTGPGADQNPTGLFIIDPISGLLSVTKPLDREHIPNFHLRAHAVDINGNQMENPIDIIINVI : S82457
S82457           : DWVIPPVNVPENSRGPFPQQLVLIRSDKDRDDTIRYSITGVGADQPPMAIFNIDPIFGRMNVTRPLDREERSSYHLRAHAVDINGNKVENPIDLSIYVI : CAD1_CHICK
CAD1_CHICK       : DWVIPPISCLENHRGPYPMRLVQIKSNKDKESKVYYSITGQGADSPPVGIFIIERETGWLEVTEQLDREKIDRYTLLSHAVSASGQPVEDPMEIIITVM : CADD_CHICK
CADD_CHICK       : AILATPILIPENQRPPFPRSVGKVIRSEGTE.GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTDLSGKIIDGPVRLDISVI : CADD_HUMAN
CADD_HUMAN       : SIVVSPILIPENQRQPFPRDVGKVVDSDRPE.RSKFRLTGKGVDQEPKGIFRINENTGSVSVTRTLDREVIAVYQLFVETTDVNGKTLEGPVPLEVIVI : HSHFATPRO
HSHFATPRO        : LPKEPFYTFTVSEDVPVGTEIDLIRAEHSG..TVLYSLVKGNTPESNRDSFVIDRQSGRLKLEKSLDHETTKWYQFSILARCTQDDHMVASVDVSIQVK : D87469
D87469           : QFLDSYQGSVYEDVPPFTSVLQISATDRDSGGRVFYTFQG.GDDGD..GDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVL : DRU41419
DRU41419         : PTFAPSYNFEVEENAPAGTLVGRVHAKDTDMNPIRYMIP.HYTDLEE..FFTINPEDGIIKTTRPLDREAQAWHNISVSATEIGGHHQDAKVRVNIKVK : DRODFUR2X

                 : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91------- :
OrigSeq          : DWVIPPINLPENSRGPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVI :OrigSeq
cons             : --------------------EEEEE-------EEEEEEE----------EEEEE----EEEEE---------EEEEEEEEE-----------EEEEEEE :cons
dsc              : ------EEE----------EEEEEE-------EEEEEEE---------EEEEE-----EEEEE---------EEEEEEEEEE----------EEEEEEE :dsc
mul              : -------------------EEEEE--------EEEEEE-----------EEEE--------EHHHHHHHHHHHHHHHHHH-----------HHEEEEEE :mul
nnssp            : --------------------EEEE--------EEEEEE-----------EEEE------EEEE---------EEEEEEEE------------EEEEEEE :nnssp
phd              : --E-----------------EEEEEE------EEEEEEE----------EEEEE----EEEEE---------EEEEEEEEE-----------EEEEEE- :phd
pred             : --------------------EEEE--------EEEEEE----------EEEEEE-----EEEE----HHHHHHHHHHHH--------------EEE--- :pred
zpred            : -------------------EEEEEE-------EEEEEE-----------EEEEE-----EEEE--HHHHHHHHHHHHEHHH---------HHHHHEEEE :zpred


access           : EEBBBBBBBEEEEEEE-EE-BBEB-BEEEEEBEBBBBBEBEEBEEEEEBBBBBEEEEBEBBBB-EBEEEEBBEBBBBB-BBEEEEEEBEEBBEBBBEBE : access

PHD Rel          : 961187513357989996525777752577765999973588899986269986389817873678844221366789754278887788762787739 : PHD Rel
Pred Rel         : 006087760999999999655665577797665580987999999008788980999976776577787588887777555099999989976666000 : Predator Rel


dssp             : ------EEE---------EEEEE---HHHHH---EEEEE-E---E-----EEE-----EEEE----------EEEEEEEEE-----E----EEEEEEE- :dssp
define           : EEEEEEEEEEEE-------EEEEEEE-----EEEEEE------------EEEEE---EEEEE-EEEE-----EEEEEEEEE--------EEEEEEEEEE :define
stride           : ------EEE---------EEEEE-----------EEEEE-----------EEE-----EEEE----------EEEEEEEEE-----EEEEEEEEEEEE- :stride


Q3 values for 1ncg-1-AUTO.2  View SS in Rasmol

	dssp	define	stride
phd	76.77	74.75	79.80
dsc	80.81	74.75	83.84
pred	59.60	53.54	62.63
mul	57.58	55.56	60.61
nnssp	76.77	70.71	79.80
zpred	57.58	58.59	61.62
cons	77.78	73.74	80.81