Results for 1ndh-1-AS


1ndh-1-AS    : PAITLENPDIKYPLRLIDKEVVNHDTRRFRFALPSPEHILGLPVGQHIYLSARIDGNLVIRPYTPVSSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMKIGDTIEFRGPNGLLVYQGK : NIA2_SOYBN
NIA2_SOYBN   : RSVALN.PREKIPCKLISKTSISHDVRLFRFALPSDDLLMGLPVGKHIFLCATVDEKLCMRAYTPTSSVHEVGYFDLVVKVYFKGVHPKFPTGGIMSQHLDSLPIGSVLDVKGPLGHIVYTGR : NIA1_PHAVU
NIA1_PHAVU   : REVALN.PREKIPCKLLSKTSISHDVRLLRFALPAEDQVMGLPVGNHVFLCATVDEKLCMRAYTPTSSVDEVGFFDLVVKVYFKGVHPNFPNGGIMSQHLDSLPIGSVVDVKGPLGHIEYTGR : NIA_ASPNG
NIA_ASPNG    : RATFLQS.KSWTKATLVKRTDVSWDTRIFTFQLQHDKQTLGLPIGQHLMIKVADPTSAIIRSYTPISDTNQEGTMDLLVKIYFDTPTVK...GGKMTMALEKLALGSEIDCKGPTGRFEYLGN : NIA1_ORYSA
NIA1_ORYSA   : APVALSSPRDKVPCQLVDKKELSRDVRLFRFALPSSDQVLGLPVGKHIFVCASIEGKLCMRAYTPTSMVDEVGHFDLLIKVYFKNEHPKFPDGGLMTQYLDSLPVGAYIDVKGPLGHVEYTGR : NIA_SPIOL
NIA_SPIOL    : RNVALN.PRVKIPCKLIEKVSLSHDVRRFRFGLPSEDQVLGLPVGKHIFLCANVDDKLCMRAYTPSSTIDVVGYFDLVVKVYFKDVHPRFPNGGVMSQHLDSLSLGSIVDVKGPLGHIEYLGK : NIA1_ARATH
NIA1_ARATH   : KNIALVNPREKIPVRLIEKTSISHDVRKFRFALPSEDQQLGLPVGKHVFVCANINDKLCLRAYTPTSAIDAVGHIDLVVKVYFKDVHPRFPNGGLMSQHLDSLPIGSMIDIKGPLGHIEYKGK : NIA_LYCES
NIA_LYCES    : RSVALI.PREKIPCKLVDKQSISHDVRKFKFALPSEDQVLGLPVGKHIFLCATVDDKLCMRAYTPTSTVDEVGFFELVVKIYFKGVHPKFPNGGQMSQHLDSLPIGAFLDVKGPLGHIEYQGK : AGU64309
AGU64309     : RNVALK.PREKIPCKLIEKDSLSHDVRRFRFGLPSKDQVLGLPCGKHIFVCATIDDKLCMRAYTPTSTIDEVGYFDLVVKVYMKGQHPRFPNGGLMSQHLDTLNLGSILEVKGPLGHIEYLGK : JC4283
JC4283       : RPVFLQS.RSWTKATLKERKDISWDTRIFSFKLEHEDQTLGLPVGQHLMIKVLDTSSAIIRSYTPISETSQKGTVDLLVKVYFATATSA...GGKMTMALDRLPLGSVVECKGPTGRFEYLGN : NIA_FUSOX
NIA_FUSOX    : REVFLQA.KTWSKAILDKKTSISPDTKIFSFKLNHEAQKIGLPTGQHLMMRLRDPATAIIRSYTPYSDGSDCGRLDILIKIYYDTPQR...KGGVMTQALDALPIGHWVDFKGPTGKFVYHGN : SCU24681
SCU24681     : KIGTLENPDIKYPLRLIDKEIISHDTRRFRFALPSPQHILGLPIGQHIYLSTRIDGNLVIRPYTPVSSDDDKGLVDLVVKVYFKDTHPKFPAGGKMSQYLENMNIGDTIEFRGPNGLLVYQGK : NIA_CICIN
NIA_CICIN    : RSVALIPRREKIPCKLISKTSVSHDVRLFRFALPSPDQVLGLPVGKHVFVCATIDDKLCMRAYTPTSTIDEVGYFELLVKIYFKGVEPKFPNGGLMSQHLESMELGSSIEIKGPLGHIEYMGR : NIA_BETVE
NIA_BETVE    : RNVALI.PGAKIPTKLVYKKSLSHDVRLFRLALPSDDQVLGLPVGKHVFLCATIDDKLCMRAYTPTSTIDEVGYLDLVVKIYFKNSNPRFPNGGLMSQHLDSLPIGSVLHVKGPLGHVEYTGR : NIA2_ARATH
NIA2_ARATH   : RNLALVNPRAKVPVQLVEKTSISHDVRKFRFALPVEDMVLGLPVGKHIFLCATINDKLCLRAYTPSSTVDVVGYFELVVKIYFGGVHPRFPNGGLMSQYLDSLPIGSTLEIKGPLGHVEYLGK : NIA3_MAIZE
NIA3_MAIZE   : PVIALSNPREKVPCQLVARTVLSRDVRLFRFALPSSGQVLGLPVGKHIFVCASIDGKLCMRAYTPTSSVDEVGHFDLLVKVYFRNENTKFPDGGRMTQYLDSLPVGAHVDVKGPLGHVEYVGR : NIA7_HORVU
NIA7_HORVU   : SAVALANPREKVRCRLVDKKSMSHNVRLFRFALPSPDQKLGLPVGKHVYVCASTGGKLCMRAYTPTSSVEEVGHVELLIKIYFKDEDPKFPAGGLMSQYLDALPLGAPVDIKGPVGHIEYAGR : NIA2_MAIZE
NIA2_MAIZE   : ...................................P.QKLGLPVGRHVYVCASIGGKLCMRAYTPTSPVDEVGHFDLLIKIYFKDEDPKYPNGGLMSQYLDSLPLGATIDIKGPHRHIEYTGR : NIA_PHYIN
NIA_PHYIN    : TDVALKG.RTKVPIVLISREVVSHDARIFKFALPAKDLRLGLPIGNHVFLYAKINGKTAVRAYTPISSDEDRGFVSFLIKVYFAGDNPVHPEGGLFSQYLDGLHLGQQIQIKGPLGHFTYYGD : CVU39930
CVU39930     : EELVALNPRKRQSFKLIEKEALSHNTRRFRFALQSPQHRFGLPVGKHVFLYAKVDGELVMRAYTPSSSDDQLGYFELVVKIYFANQHPRFPEGGKMSQYLEGMAIGDFMEVKGPLGHVHYKGR : NIA_VOLCA
NIA_VOLCA    : DPLVVLNPRQKVKLPLIERIELNRNTRIFRFGLPSPQHRIGLPVGKHVFTYATINGENVMRAYTPISGDEELGRLDMLIKVYFANEHPAFPDGGKMSQHFESLRIGDTVEFKGPLGHFVYDGR : NC5R_YEAST
NC5R_YEAST   : TKPVLDPRNDFQSFPLVEKTILTHNTSMYKFGLPHADDVLGLPIGQHIVIKANINGKDITRSYTPTSLGDTKGNFELLVKSYPT.........GNVSKMIGELKIGDSIQIKGPRGNYHYERN : S54059
S54059       : RRRSLYP.DRWTSLELEDQTIISKNTALYRFKLKTRLESLDIPAGHHVAVRVPIDGKQEVRYYNPISSKLESGYLDLVVKAYVD.........GKVSKYFAGLNSGDTVDFKGPIGTLNYE.. : S49640
S49640       : TDKSLYR.NKWVALPLSKKTRISRNTSLYCFKLKYPFERLHIPMGYHLAVRVTINGERLVRYYTPVNVPNTEGHLELVVKTYKH.........GVVSKYFDKLKIRQYVEFKGPLGELEYD.. : NIA_EMENI
NIA_EMENI    : RPTFLTP.KAWTKATLTKKTSVSSDTHIFTLSLEHPSQALGLPTGQHLMLKTPDPKSSIIRSYTPISPSDQLGMVDILIKIYAETPSIP...GGKMTTALDTLPLGSVIECKGPTGRFEYLDR : NIA_NEUCR
NIA_NEUCR    : RPIFLQS.KTWNSAILTFKESVSPDTKIFHFALSHPAQSIGLPVGQHLMMRLPDPAKSIIRAYTPISDTLERGTLRVLVKIYYASPTEDI.KGGQMTQALDALALGKAVEFKGPVGKFVYQGR : NIA_BEABA
NIA_BEABA    : RAVFLQP.KYWSKAILETKTDVSSDSKIFSFRLDHAAQSIGLPTGQHLLVRLRDPATAVIRAYTPLSETHAKGQLDILIKIYRDVPGQ...PGGKMTQALDSIPLGHFVDIKGPVGKFEYLGK : BFU43783
BFU43783     : RPIFLQP.KSWQKAVLTAKKVISSDTRIFSFTLDHAEQVIGLPVGQHLMMRLRDPVTAIIRSYTPLSLGTDKGVLDILIKIYLKNEKG...PGGKMTMALESIPVGHSIDFKGPIGKFEYVAK : NIA_LEPMC
NIA_LEPMC    : RPTFLDS.RTWSKALLSSKTKVSWDTRIFRFKLDHASQTLGLPTGQHLMIRLRDPVTAIIRSYTPISQISEQGFCDVLIKIYADAPGR...EGGKMTKALDSIPCGHWVDMKGPIGKFEYLGK : NIA_HANPO
NIA_HANPO    : REVLLDP.RKWHKITLAEKEVISSDSRIFKFDLEHSEQLSGLPTGKHLFLRLKDSSGYVMRAYTPKSSNSLRGRLEILIKVYFPNREYP..NGGIMTNLIENLQVGNQIEVKGPVGEFEYVKC : NIA_USTMA
NIA_USTMA    : SKPFLDP.KKWRATRLGEQANHSPDARIFRFALGSEDQELGLPWPAALRLSLEKRRTMVQRAYTPYSGNTQRGFLDILIKVYFPSDAAATFEGGKMTMLLEKIDVSSTIELKGPLGSFTYLGQ : CHHB_BOMMO

             : 3---------13--------23--------33--------43--------53--------63--------73--------83--------93--------103-------113-------123 :
OrigSeq      : PAITLENPDIKYPLRLIDKEVVNHDTRRFRFALPSPEHILGLPVGQHIYLSARIDGNLVIRPYTPVSSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMKIGDTIEFRGPNGLLVYQGK :OrigSeq
cons         : --EE---------EEEE----------EEEEEE-------------EEEEEE-----EEEEE------------EEEEEEEE-------------HHHHHHH-----EEEE-----EEEE--- :cons
dsc          : ------------EEEHH----------EEEEEE-------------EEEEEE-----EEEEEE-----------EEEEEEEE---------------HHHHH-----EEEE-----EEEE--- :dsc
mul          : ------------HHHHHHH---------HHHHH-------------EEEEEH-----HEEEEE----------HHHHHHHHEE------------HHHHHHH-----EE--------EEE--- :mul
nnssp        : --EEE---------EE-----------EEEEE---------------EEEEE-----EEEEE------------EEEEEEEE-----------------------------------EEE--- :nnssp
phd          : --EE---------EEEEE---E--EE-EEEEEE-----EEE-----EEEEEEE----EEEEE------------EEEEEEEEEE-----------HHHHHHH-----EEEEE---EEEEEE-- :phd
pred         : --------------------------EEEEE---------------EEEEEE-----EEEEEE-------------EEEEE--------------HHHHHH-----EEEEE------EEE--- :pred
zpred        : -EE---------HHHHHH--------------------EEEEE--EEEEEEE-----EEEEEEE-------HHHHHHHEEEEE-----------EEEEEEEE----EEEEEEE---EEEE--- :zpred


access       : EEBBBEEEEEEBEBEBBEEEBBEEEBEBB-BBBEEEEEBBBBEBBEBBBBBBEBEBEBBBEB--EEBEBEEEBBBEBBBEBBBEEEEEEBEEEBEBBEBBEBBEBBBBBEBEEEBB-BE--EE : access

PHD Rel      : 941036998654224443221211122246731576542434556368999943972277752578774521111456888875478999999611233532478845898459504676539 : PHD Rel
Pred Rel     : 000678999988655755565887767586538999976569999987098677797660860999999976665677077656999990999965677855888878998899997667000 : Predator Rel


dssp         : --E-------EEEEEEEEEEE----EEEEEE-------E-------EEEEEEEE--EEEEEEE-------------EEEEE-------------HHHHHHHH-----EEEEEEEE--EEEEE- :dssp
define       : EEEE-----EEEEEEE-EEEE----EEEEEEEEE-------------EEEEE---EEEEEE-EEEE--------EEEEEEE-------------HHHHHHHHH---EEEEEEEE--EEEEE-- :define
stride       : --E-------EEEEEEEEEEE----EEEEEEE------E-------EEEEEEEE--EEEEEEE-------------EEEEE-------------HHHHHHHH----EEEEEEEEE--EEEEE- :stride


Q3 values for 1ndh-1-AS  View SS in Rasmol

	dssp	define	stride
phd	76.42	71.54	76.42
dsc	75.61	73.17	75.61
pred	78.86	70.73	78.86
mul	63.41	56.10	62.60
nnssp	66.67	65.04	66.67
zpred	59.35	55.28	59.35
cons	77.24	75.61	77.24