Results for 1ndh-2-AS


1ndh-2-AS    : GKFAIRPDKKSSPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNEHSARFKLWYTVDRAPEAWDYSQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLERVGHPKERCFAF : NIA2_MAIZE
NIA2_MAIZE   : RRFVVNGKQRH......ARRLAMIQAGRGTTPDDDTEQAVLRDPDDDTEMHLVYANRTDHDMLLREEIDRAWLPRTRRLKVWYVVSKVPE.WEYGVGRVDEHVMREHLPL.DSETIALVCGPPAMIECTVRPGLEKMGYDLDKACLV : NIA2_ARATH
NIA2_ARATH   : GSFTVHGKPKF......ADKLAMLAGGTGITPVYQIIQAILKDPEDETEMYVIYANRTEEDILLREELDGWAEQYPDRLKVWYVVES.AK.WAYSTGFISEAIMREHIPDGDGSALAMACGPPPMIQFAVQPNLEKMQYNIKEDFLI : PCU207791
PCU207791    : GRVSISGKERH......VRSFKMICGGTGITPVFQVLRAVMQDTQDPTTCVVLDGNRQEEDILCRSDLDAYVETDS..CTVVHTLTKGSD.WTGHRGRISEELLAEYAAPEE.QSMVLVCGPG.PMEKSAREILLAQGWAESDLHF. : SOYNRDM
SOYNRDM      : GNFLVHGKQRF......AKRLAMLAGGTGITPIYQVAQAILKDPEDPTEMHVVYANKTEDDILLKEEMMCGEEQC.DRFKVVVRV.ETAR.WEYSVGFITESIMREHLPE.STDALALTCGPPPMIQFAVQPNLEKMGYDIKADLLV : AGU64309
AGU64309     : GNFMVHGKPKF......AKKLAMISGGTGIPPIYQVMQAILKDPEDETEMHVIYANRTEEDILLREELDTWAIDYKDRVKVWYVVEK.AN.WKYDTGFISEQILRDHVPE.SSHVLALTCGPPPMIQFAVQPNLEKMGYDIKEQLLI : NIA_CUCMA
NIA_CUCMA    : GNFMVHGKPRF......ARRLAMLAGGTGITPIYQVVQAILKDPEDETEMYVVYANRTEDDILLRDELDTWAKKN.QRLKVWYVVQESIR.WEYSVGFITENILREHIPA.AEDTLALACGPPAMIQFAVQPNLEKMNYDTKNSLLV : NIA_LYCES
NIA_LYCES    : GNFLVHGKQKF......AKKLAMIAGGTGITPVYQVMQSILKDPEDDTEMYVVYANRTEDDILLKDELDAWAEQVPNRVKVWYVVQESIT.WKYSTGFVTESILREHIPE.SHTTLALACGPPPMIQFAINPNLEKMGYDIKEELLV : NIA1_ORYSA
NIA1_ORYSA   : GEFVINGKPRN......ARRLAMIAGGSGITPMYQVIQSVLRDPEDTTEMHLVYANRTEDDILLRDELDRWAAEYPDRLKVWYVIDQVKRPWKYGVGFVTEEVLREHVPE.GDDTLALACGPPPMIKFAVSPNLEKMKYDMANSFIV : NC5R_RAT
NC5R_RAT     : GKFAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHTVCYLLFANQSEKDILLRPELEELRNEHSSRFKLWYTVDKAPDAWDYSQGFVNEEMIRDHLPPPGEETLILMCGPPPMIQFACLPNLERVGHPKERCFT. : GFNIAD
GFNIAD       : GLCTINDRERR......VRRFIMVCGGSGITPIRQVLRAIMHNPNDTTPCLVFNGNRSVDDILCKEELDQLEAANPARCRVVNALSNPPP.WNGLKGFVNQALVPEEMTLPEGDELVLVCGPP.PMVKAVEASFLGMGFKSDDFVF. : S70584
S70584       : GRVLISGKERH......VRSFKMICGGTGITPILQVLRAVVQDHQDPTSCVVLNGNRQEEDILRRAELDGFMASDS..CNIIHTLSKAPD.WTGRRGRISEELLKEYAAPED.ESMVLICGPP.AMEESARRILLAEGWKESDLHF. : FENR_ANASO
FENR_ANASO   : DP...............EANVIMLATGTGIAPMRTYLWRMFKDPQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQK.PQGGRMYIQDRVAEHADELWNQKTHTYICGLR.GMEEGIDAAKEGVTWSDKDLKKA : NIA_USTMA
NIA_USTMA    : QQIRWKPASACS.....LRKLAMIAGGSGITPIWSTLKAIADEPLDPIQIWIVYGNRTEQDILIREELDALSRLKG.NLKVWHVLSNCTPEWSMGRGISLPMSLGAPATNHFEDTLALVCGPP.PMEKAVSDGLNELGWDLQRCVVF : NIA_PHYIN
NIA_PHYIN    : GNFSLETTNFH......AYKFGFVAGGTGITPVYQVMRAILEDAKDQTKVALIYCVRSQRDLLLRKELETLQKLRPGQCRIFYTLSDMELLWAYGKSRLNFAMVKNIIGS..DAEDVCMCGPEGMIEYACKPALLKLNYDLTQTTV. : NIA_LOTTE
NIA_LOTTE    : GNFIAHGEPKF......ARRLAMLAGGTGITPIYQVIQAVLKDDDRTEMFFAVYSNKTESDILLREELDAWAKKHSDRFKVWYVVDKAGN.WAFSTGRVNESIMRVHLPG.PSDALALACGPPINSAYGWQPSLENIGYKKDDVPVF : NIA_CICIN
NIA_CICIN    : GTFSVHGKQKF......ARKLAMFAGGTGITPDLSSDASYLKDPEDDTEMYVVYANRTEDDILLREELDAWADKYSDRVKVWYVVAKSIR.WKYSEGFITEDIMREHVPE.SEDTLALACGPPPMIQFAINPNLEKMGYDIKNSLLV : NIA_BETVE
NIA_BETVE    : GNFLVHGEPKF......AKRLAMVAGGTGITPIYQVIQAILKDPEDETEMFVVYANRTEDDILLREELDDWAKKH.EKLKVWYVVKESKR.WEYSVGYIRESILREHIPE.SDDVLALACGAPSMIEEAVRLNLEKMNYDTKNSLII : NIA3_MAIZE
NIA3_MAIZE   : GGFVIDGKPRK......AGRLAMVAGGSGITPIYQVIQAVLRDPEDKTEMHLVYANRTEDDILLRAELDRWAAEYPERLKVWYVVSQVKR.WKYSVGIVTEAVLRDDVPE.RDGTLALLCGPPSMIQSPILPNLEKMKHQLDDSVVS : CVU39930
CVU39930     : GSYTLDGTPHS......ASRISMIAGGTGITPMLQVIKAVLKDPKDTTQLSLLYANVSPDDILLREELDALAAKH.DNFSVWYTVDKADEGWPFSTGFINEEMVKERLFPAGDDTICCLCGPPPMIKFACLPNLEKLGYKPEQCIQ. : NIA_VOLCA
NIA_VOLCA    : GSYTLNGKLHKH.....ATHMSFVAGGTGITPCYAVIKAALRDPEDKTQISLVFANNTEEDILLREELDELANNHPDRFHLWHTVSQTNSSWKFSTGRVTLEMFKQHLFACGPECLALMCGPPAMLEHCCVPFLESMGYSKEQMIH. : MCR1_YEAST
MCR1_YEAST   : Q................FKSITLLGAGTGINPLYQLAHHIVENPNDKTKVNLLYGNKTPQDILLRKELDALKEKYPDKFNVTYFVDDKQDDFDGEISFISKDFIQEHVPGPKESTHLFVCGPP.PFMNAYSGELNNLGYSKDQVFK. : NC5R_YEAST
NC5R_YEAST   : GPRGNYHYERN.....CRSHLGMIAGGTGIAPMYQIMKAIAMDPHDTTKVSLVFGNVHEEDILLKKELEALVAMKPSQFKIVYYLDSPDR.WTGGVGYITKDVIKEHLPAAMDNVQILICGPP.AMVASVRRSTVDLGFRREDQVFV : S49640
S49640       : T................ATELGIIAGGSGITPVLQVLQEIIPSPEDLTHISLIYANETEDDILMKSQLDHMAKEYP.HFKVHYVIHKPNG.WNGDVGYVTLEEMKRYLPKQ.EDHRLLICGPP.KMNEMVLNYAKELGWSNTDKVFV : S54059
S54059       : S................SKHLGIVAGGSGITPVLQILNEIITVPEDLTKVSLLYANETENDILLKDELDEMAEKYP.HFQVHYVVHYPSD.WTGDVGYITKDQMNRYLPEY.EDNRLLICGPD.GMNNLALQYAKELGWKVDDQVFV : NIA_HANPO
NIA_HANPO    : GHCSFNNKPYQ......MKHFVMISGGSGITPTYQVLQAIFSDPEDRTSVQLFFGNKKVDDILLREELDHIQEKYPEQFKVDYSLSDLDHLWSGVRGRLTFDILDTYVRGKMGEYMLLVCGPP.GMNGVVENWCNARKLDKQYVVY. : NIA_LEPMC
NIA_LEPMC    : GVCSINGNERR......VRSMKMICGGSGITPIYQVLRAILQDSADSTHCTVLNGNRLEEDILCREDLDRFAEENG..CTLVHTLTQAAE.WTGRRGRIGEELLKEFCGTEE.DGLVLVCGPE.GLERSVKGLLSGMAWRDDDVIF. : NIA_EMENI
NIA_EMENI    : GRVLISGKERF......VKSFVMICGGTGITPVFQVLRAVMQDEQDETKCVMLDGNRLEEDILLKNELDEFEALAGEKCKIVHTLTKGSE.WTGRRGRIDEELIRQHAGTPDRETMVLVCGPE.AMEKASKKILLSLGWKEENLHY. : NIA_BEABA
NIA_BEABA    : GHCTVSGTSRH......VRRFVMICAGSGVTPIFQVLRAVTSDAQDGTECLVLDGNRCEKDILCREELDAMVARAPARTTLLHKLSRPDA.WCGLRGRMDKEYLEEHIGGFDGREMVLVCGPA.ALEETVRSVLVEMAWKPEDMLF. : NIA_NEUCR
NIA_NEUCR    : GVCSVNGRERK......VKRFVMVCGGSGVTPIYQVAEAVAVDDQDGTECLVLDGNRVEGDILMKSELDELVERAKGRCRVKYTLSRPGA.WEGLRGRLDKTMLEREVGEGRGETMVLLCGPE.GMQNMVREVLKGMGWKDEDVLV. : MSU815945
MSU815945    : GPAGSFSLHK......SERPRFFVAGGTGLSPVLSMIRQLHKE.SDPQPATLFFGVTNYEELFYVDELKALQHAMPSLDVQIAVVNVS...NGVAKGTVIDLLQDELGRR.AEKPDIYLCGPP.GMIDAAFAAASSAGVPKEQVYLE : MEMC_METCA
MEMC_METCA   : GPLGVFGLKER.....GMAPRYFVAGGTGLAPVVSMVRQMQEW.TAPNETRIYFGVNHEPELFYIDELKSLERSMRNLTVKACVWHPS...WEGEQGSPIDALREDLESS.DANPDIYLCGPP.GMIDAACELVRSRGIPGEQVFFE : PPU040525
PPU040525    : N................ARDIVCIAGGSGLAPMLSVARGALAQ.EGAQRVHFFYGGRSQPDLGAMAALDDLVGDN..RLALSVVLSAPGPEWQGPTGFVHAEVERVLVAP..DRFEFYFAGPP.PMIEAVQALLMHTHRVPEQMHFD : RERAMOA3
RERAMOA3     : GPYGQLKIRLS......HRPILMIAGGSGLAPLLSMLRDLAAK.KCDRPVSMFFGARSVDDLYLIEEIREIGESLA.DFEFIPVLSESSP.WHGETGMVTDALLRWRAEL...AHDVYLCGPP.PMIDAAVPLLVERGVRPRNIYYD : XYLA_PSEPU
XYLA_PSEPU   : APYGQFGLHE......SNATMVCVAGGTGLAPIKCVLQSMTQA.QRERDVLLFFGARQQRDLYCLDEIEALQLDWGGRFELIPVLSEESSTWKGKRGMVTEYFKEYLTG...QPYEGYLCGPP.PMVDAAETELVRLGVARELVFAD : PAU86603
PAU86603     : APQGTFHLHG......GDAPMLCIAGGSGLAPLVSILEHARAN.RIKRDCILLFGARTEGDLYQLEAIGNIAANWQGEFRFIPVLSHEPEHWTGARGLVTEHIPADFC....EGAEGYLCGPP.PMIDAAIARLLDNRLPLEKIFYD : MT1_MIMGU

             : 126-------136-------146-------156-------166-------176-------186-------196-------206-------216-------226-------236-------246-------256-------266---- :
OrigSeq      : GKFAIRPDKKSSPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNEHSARFKLWYTVDRAPEAWDYSQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLERVGHPKERCFAF :OrigSeq
cons         : --EEE---------------EEEEE------HHHHHHHHHHH------EEEEEE-----HHHHHHHHHHHHHHH----EEEEEEE-------------HHHHHHHHH--------EEEE------HHHHHHHHHHH----------- :cons
dsc          : --------------------EEEEE-------HHHHHHHHH-------EEEEE-----HHHHHHHHHHHHHHH-----EEEEEEE-------------HHHHHHHH--------EEEEE-------HHHHHHHHHHH---------- :dsc
mul          : ------------------HHEEEE-------EEEEHHHHHHH------HEEEEE------HHHHHHHHHHHHHH----HEEEEEE--------------HHHHHHHHH--------EEE-------HHHHHHHHHHH------HEE- :mul
nnssp        : --EEE---------EE------EE--------HHHHHHHHH-------EEEEEE-------HHHHHHHHHHHHH----EEEEEEE---------------HHHHHHH--------EEEE------HHHHHHHHHHH--------EEE :nnssp
phd          : --EEE--------------EEEEEE-----HHHHHHHHHHHH------EEEEEE-----HHHHHHHHHHHHHHH----EEEEEEEE------------HHHHHHHHH--------EEEE----HHHHHHHHHHHHH----------- :phd
pred         : -------------EEEHHHHHEEEE------HHHHHHHHHHH------EEEEEE----HHHHHHHHHHHHHHHH----EEEEEEE-------------HHHHHHHHHH------EEEEE---------------------------- :pred
zpred        : ------------------HHEEEEEE---EEEEEEEEEEE------HHHEEEEE----HHHHHHHHHHHHHHHH-----EEEEEE---------------HHHHHHH-------HEEEEE-----EEEHHHHHHHHHHHHHHHHEEH :zpred


access       : EEBBBEBEEE--EBBEBBBBBBBBBBBEBBBBBBBBBEBBBEEEEEEEEBBBBBBEEEEEEBBBEEEBEEBBEE-EEEBEBBBBBEEEEEEBEBBEB-BBEEBBEEBBEEEEEEBBBBBBE-EEBBEBBB-EBBEEBE-E-EEBBBE : access

PHD Rel      : 962423788899853322226777348782389999999982677874499886377513576789999999846996289999728887545532221599889963798987156743999121478878786447764333329 : PHD Rel
Pred Rel     : 006690099997766588887765589998678077009088900976558865677766889899999999807777567777668999988788865578888668889999678907099976555667765678899986000 : Predator Rel


dssp         : -EEEE------EEE-----EEEEEEEHHHHHHHHHHHHHHHH------EEEEEEEEEEHHH----------HHHH---EEEEEEEEE-------EE-----HHHHHH---HHH--EEE-----HHH-----HHHHH----HHHEE-- :dssp
define       : EEEEEE--EEEEEE------EEEEE----HHHHHHHHHHHHHH---EEEEEEEEEE---------------------EEEEE------------------HHHHHHHH-----EEEEEE-----------HHHHHHHH----EEEEE :define
stride       : -EEEE------EEE-----EEEEEEE--HHHHHHHHHHHHHH------EEEEEEEEEE--------------------EEEEEEEEE-------EE-----HHHHHH---HHH--EEE-------------HHHHHH---HHHEE-- :stride


Q3 values for 1ndh-2-AS  View SS in Rasmol

	dssp	define	stride
phd	69.39	62.59	65.99
dsc	59.18	61.90	61.22
pred	59.18	58.50	58.50
mul	55.78	60.54	59.18
nnssp	60.54	64.63	62.59
zpred	52.38	51.70	52.38
cons	65.99	64.63	65.31