Results for 1nfp-1-AS


1nfp-1-AS    : MTKWNYGVFFLNFYHVGQQEPSLTMSNALETLRIIDEDTSIYDVVAFSEHHIDKSYNDETKLAPFVSLGKQIHVLATSPETVVKAAKYGMPLLFKWDDSQQKRIELLNHYQAAAAKFNVDIANVRHRLMLFVNVNDNPTQAKAELSIYLEDYLSYTQAETSIDEIINSNAAGNFDTCLHHVAEMAQGLNNKVDFLFCFESMKDQENKKSLMINFDKRVINYRKEHNLN : LXB1_PHOLE
LXB1_PHOLE   : ...MNFGLFFLNFQLKGMTSEA.VLDNMIDTIALVDKDEYHFKTAFVNEHHFSKRIAEEASLLDQMSDGLKQYILATSMGVVEWAAKKGLPLTYRWSDTLAEKENYYQRYLTVAAENNVDITHVDHQFPLLVNINPDRDIAKQEMRDYIRGYIAEAYPEEKIEELIKQHAVGTEDEYYE.SSKYALEKTGSKNVLLSFESMKNKAAVIDLINMVNEKIKKNL...... : LUXA_KRYAS
LUXA_KRYAS   : ..........LTYQPPQLDQKE.VIKRLVNLGQASE..SCGFDTAWLLEHHFTERQLEDVNLLDQMSKGAPVYVVAESASTTEWAAERGLPIILSWIINNNEKKSQLDLYNEIALEHGHDVSNIDHCMSYITSVDHNSNKAKDICRDFLAHWYDSYLNNRRIDYSYEINPVGTPQECIE.IIQSDIDATGIHNICCGFEANGSETEIIASMKLFQSDVMPYLKEKSNC : LXB1_PHOLU
LXB1_PHOLU   : ...MKFGLFFLNFINSTTVQEQ.SIVRMQEITEYVD..KLNFEQILVYENHFSDAIAEEACLLDQLSEGPRKYVTATSHHIVEWAAKKGIPLIFKWDDSNDVRYEYAERYKAVADKYDVDLSEIDHQLMILVNYNEDSNKAKQETRAFISDYVLEMHPENKLEEIIAENAVGNYTECIT.AAKLAIEKCGAKSVLLSFEPMNDLMSQKNVINIVDDNIKKYHMEYT.. : LUXB_VIBHA
LUXB_VIBHA   : ...MKFGLFFLNFMNSKRSSDQ.VIEEMLDTAHYVD..QLKFDTLAVYENHFSNRVAEEACLLDQMSEGPAQFVNATSKEVVEWAAKLGLPLVFRWDDSNAQRKEYAGLYHEVAQAHGVDVSQVRHKLTLLVNQNVDGEAARAEARVYLEEFVRESYSEQKMGELLSENAIGTYEESTQ.AARVAIECCGAADLLMSFESMEDKAQQRAVIDVVNANIVKYHS..... : LUXF_PHOLE
LUXF_PHOLE   : MTKWNYGVFFLNFYHVGQQEPSLTMSNALETLRIIDEDTSIYDVVAFSEHHIDKSYNDETKLAPFVSLGKQIHILATSPETVVKAAKYGMPLLFKWDDSQQKRIELLNHYQAAAAKFNVDIAGVRHRLMLFVNVNDNPTQAKAELSIYLEDYLSYTQAETSIDEIINSNAAGNFDTCLHHVAEMAQGLNNKVDFLFCFESMKDQENKKSLMINFDKRVINYRKEHNLN : LXA1_PHOLE
LXA1_PHOLE   : .............QPPGESHKE.VMDRFVRLGVASE..ELNFDTFWTLEHHFTERQMEDLLLLDQMSKGIPTCMTAESAATTTWLAERGLPMVLSWIITTSEKKAQMELYNEIAAEHGHDIHNIDHSMTFICSVNEDPEKAESVCRDFLSNWYESYTNRRRLDYSNNLNPVGTPEKCIE.IIQRDIDATGINNITLGFEANGSEQEIIASMERFMTQVAPYLKDP... : LUXF_PHOPO
LUXF_PHOPO   : MNKWNYGVFFVNFYNKGQQEPSKTMNNALETLRIIDEDTSIYDVINIDDHYLVKKDSEDKKLASFITLGEKLYVLATSENTVDIAAKYALPLVFKWDDINEERLKLLSFYNASASKYNKNIDLVRHQLMLHVNVNEAETVAKEELKLYIENYVACTQPNGSIDSIIQSNVTGSYKDCLSYVANLAGKFDNTVDFLLCFESMQDQNKKKSVMIDLNNQVIKFRQDNNLI : LUXB_VIBFI
LUXB_VIBFI   : ...MKFGLFFLNFQKDGITSEE.TLDNMVKTVTLIDSTKYHFNTAFVNEHHFSKRVAEEASLLDQMSEGPKQYVSATSKEVVMWAAKKALPLTFKWEDNLETKERYAILYNKTAQQYGIDISDVDHQLTVIANLNADRSTAQEEVREYLKDYITETYPDEKINCIIEENAVGSHDDYYE.STKLAVEKTGSKNILLSFESMSDIKDVKDIIDMLNQKIEMNLP..... : LXB2_PHOLE
LXB2_PHOLE   : ...MNFGLFFLNFQPEGMTSEM.VLDNMVDTVALVDKDDYHFKRVLVSEHHFSKRIGEQTGLLDQMSYGVKQYILASSMGVVEWAARKGLPLTYRWSDSLAEKEKYYQRYLAVAKENNIDVSNIDHQFPLLVNINENRRIARDEVREYIQSYVSEAYPELRVEELIEQHAVGKVDEYYD.STMHAVKVTGSKNLLLSFESMKNKDDVTKLINMFNQKIKDNLIK.... : GFNIAD

             : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------221----- :
OrigSeq      : MTKWNYGVFFLNFYHVGQQEPSLTMSNALETLRIIDEDTSIYDVVAFSEHHIDKSYNDETKLAPFVSLGKQIHVLATSPETVVKAAKYGMPLLFKWDDSQQKRIELLNHYQAAAAKFNVDIANVRHRLMLFVNVNDNPTQAKAELSIYLEDYLSYTQAETSIDEIINSNAAGNFDTCLHHVAEMAQGLNNKVDFLFCFESMKDQENKKSLMINFDKRVINYRKEHNLN :OrigSeq
cons         : -------EEEEE-----------HHHHHHHHEEEE-------EEEEE-----HHHHHHHHHHHHHHH----EEEEE---HHHHHHHHH----EEEE---HHHHHHHHHHHHHHHHH---------EEEEEEEE----HHHHHHHHHHHHHHHHHHH--HHHHHHHHHH------HHHHHHHHHHHHHH----EEEEEEH---HHHHHHHHHHHHHHHHHHHHH----- :cons
dsc          : -------EEEE------------HHHHHHHHHHHH---------EE----HHHHHHHHHHHHHHHHH-----EEE----HHHHHHHH-----EEE---HHHHHHHHHHHHHHHHHH----------EEEEEE-----HHHHHHHHHHHHHHHH--------HHHHHHH--------HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------- :dsc
mul          : --------HHH----------H-HHHHHHHHHHEH-------HHHHHHHHHHHHHHHHHHHHHHHH-----EEEEE---HHHHHHHH----EEEE-------HHHHHHHHHHHHHH-----HH----HEEEE-------HHHHHHHHHHH--E--------HHHHHH----------HH-HHHHHH-------EHHHHHHHH---HHHHHHHHHHHHHH-E------- :mul
nnssp        : -------EEEEE-----------HHHHHHHHHHHH-----EEEEEEE------HHHHHHHHHHHHHH----EEEEE--HHHHHHHHHH---EEEE----HHHHHHHHHHHHHHHHH----HHHHHHHHEEEEE----HHHHHHHHHHHHHHHHHHH---HHHHHHHHH-----HHHHHHHHHHHHHH------EEEEE-----HHHHHHHHHHHHHHHHHHHHH---- :nnssp
phd          : ---EE--EEEEE--------HHHHHHHHHHHEEEE-------EEEEEE----HHHHHHHHHHHHHHH----EEEEE---HHHHHHHHH----EEEE---HHHHHHHHHHHHHHHHHH--------EEEEEEEE-----HHHHHHHHHHHHHHHHHH--HHHHHHHHHH------HHHHHHHHHHHHHH----EEEEEEE---HHHHHHHHHHHHHHHHHHHHH----- :phd
pred         : -----EEEEEEE------------HHHHHHHEEEE-----EEEEEEE-----------------------EEEEEE---HHHHHHHH----EEEEE---HHHHHHHHHHHHHHHHH------------EEEEE-----HHHHHHHHHHHHHHHH----HHHHHHHHHH-------HHHHHHHHHHHH-----EEEHHHHHHHHHHHHHHEEE-HHHHHHHHHHHH--- :pred
zpred        : -----------------------HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH---EEEEEHHHHHHHHHHHHHEEEEEEHH----HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE-----HHHHHHHHHHHH---------HHHHHHHH--------HHHHHHHHHHHHH---HEEEEHHHHHHHHHHHHHHHHHHHHHHH--------- :zpred


access       : EEEBEBBBBBBBB-EEEEEEEEBBBEEBBEBBEBBEEEEB-BEBBBBBE--BEEEBBEEBEBBEEBEEBBEBBBBBEBEEBBEBBBEEBBEBBBEB-EEEEEEEEBBEBBBBBBBEBBBEBBBBEBBBBBBBBBEEEEEEBEEEBEBBBEEBBBEB-EEEEBEEBBEEBBBEEBEEBBEBBBEBBBEBEBBEBBBBBBEBBEEEEEBEBBBEBBBEEBBE-BEEEE-E : access

PHD Rel      : 984233248863267756613677889874315661465433457541222202468886588786238945888346147999999648915784496578899999999999971876321121269999718992689999999999999962432457898641346881368988999986415854488864146615767899988999999875135699 : PHD Rel
Pred Rel     : 009997869606788999077066786899070660999756888868987678766998876667789868998789668799788609767765677688999999999998877886665766777689889907888999999988885858778777877757776899955578999977677775556785886600888866667577788777700000 : Predator Rel


dssp         : -----EEEEEE---------HHHHHHHHHHHHHHHHH----EEEEEEE------E-----E---EEEE--EEEEE---HHHHHHHHH----EEE-----HHHHHHHHHHHHHHHHHH--------EEEEEEEEE---HHHHHHHHHHHHHHHHHHH-----HHHHHH--EEE-HHHHHHHHHHHHHH----EEEEEE------HHHHHHHHHHHHHHHHHHHHH---- :dssp
define       : -EEEEEE-EEEE-------HHHHHHHHHHHHHHHHHH--------EEEE-EEEEEE--EEEE-EEEE--EEEEEE--HHHHHHHHHHHEEEEEE----HHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHEEEEHHHHHHHHHHHHHHHHH----EEEEE----HHHHHHHHHHHHHHHHHHHHHHHH-- :define
stride       : ------EEEEE----E--E-HHHHHHHHHHHHHHHHHH-----EEEEE------E-----E---EEEE--EEEEE---HHHHHHHHHH---EEE-----HHHHHHHHHHHHHHHHHH--------EEEEEEEEE---HHHHHHHHHHHHHHHHHHH-----HHHHHHH-EEE-HHHHHHHHHHHHHHH---EEEEEE------HHHHHHHHHHHHHHHHHHHHHH--- :stride


Q3 values for 1nfp-1-AS  View SS in Rasmol

	dssp	define	stride
phd	77.63	68.42	77.63
dsc	70.61	60.53	70.61
pred	76.32	60.09	73.68
mul	61.84	50.00	59.65
nnssp	78.95	67.54	77.19
zpred	60.96	56.14	60.09
cons	76.75	65.79	76.75