Results for 1ovb-1-GJB


1ovb-1-GJB    : SYYAVAVVKKGTDFMIKDLRGKTSCHTGLGRSAGWNIPIGTLIHREDIEWEGIESGSVEQAVAKFFSASCVPGATIEQKLCRQCKGDAKTKCLRNAPYSGYSGAFQCLKDGKGDVAFVKHTTVQENAPEEKDEYELLCLDGSRQPVDSYKTCNWARVAA : S49163
S49163        : HYLAVAVVKKGTDFQLNQLQGKKSCHTGLGRSAGWIIPIGLLFCNLPE.....PRKPLEKAVASFFSGSCVPCADAFPQLCQLCPG.CGCSPTQ..PFFGYVGAFKCLRDGGGDVAFVKHTTIFEVLPADRDQYELLCLDNTRKPVDQYEDCYLARIPS : I47228
I47228        : HYYAVAVVKKGSDFQLSQLRGKKSCHTGLGWSAGWNIPMGILLPPD..........SGEEAAAKFFSSSCVPCADAFPKMCQLCAGKCACSNHE..RYFGYSGAFKCLQEDVGDVAFVRHVTVFENLPADRDQYELLCKDNTRRPVDDYENCYLAQVPS : NRL_1DOT
NRL_1DOT      : SYYAVAVVKKGTDFMIKDLRGKTSCHTGLGRSAGWNIPIGTLIHREDIEWEGIESGISEQAVAKFFSASCVPGATIEQKLCRQCKGDAKTKCLRNGPYSGYSGAFQCLKDGKGDVAFVKHTTVQENAPEEKDEYELLCLDGSRQPVDSYKTCNWARVAA : D89084
D89084        : CYYAVAVAKKGTEFGFLDLRGKKSCHTGLGKSAGWNIPIGTLVTVGQIQWAGIEDRPVESAVSDFFNASCAPGANRDSQLCQLCMGDCSRSHNE..PYYDYSGAFQCLKDGAGEVAFIKHLTVPA...AEKASYELLCKDNTRAPIDSYKTCHLARVPA : BOVLACFE11
BOVLACFE11    : HYYAVAVVKKGSNFQLDQLQGRKSCHTGLGRSAGWVIPMGILRPYLSWTE...SLEPLQGAVAKFFSASCVPCIDAYPNLCQLCKGQCACSSRE..PYFGYSGAFKCLQDGAGDVAFVKETTVFENLPADRDQYELLCLNNSRAPVDAFKEYHLAQVPS : TRFE_XENLA
TRFE_XENLA    : CYYAVAVVKKSSKFTFDELKDKKSCHTGIGKTAGWNIIIGLLLERKLLKWAGPDSETWRNAVSKFFKASCVPGAK.EPKLSQLCAGKCSRSNNE..PYYNYAGAFKCLQDDQGDVAFVKQSTVPE...EFHKDYELLCPDNTRKSIKEYKNCNLAKVPA : TRFL_PIG
TRFL_PIG      : YYYAVAVVKKGFNFQLNQLQGRKSCHIGLGRSAGWNIPIGLLRRFLDWAG...PPEPLQKAVAKFFSQSCVPCADAYPNLCQLCIGKCACSSQE..PYFGYSGAFNCLHKGIGDVAFVKESTVFENLPADRDKYELLCPDNTRKPVEAFRECHLARVPS : NRL_1DSN
NRL_1DSN      : HYYAVAVVKKGGSFQLNELQGLKSCHTGLRRTAGWNVPIGTLRPFLNWTG...PPEPIEAAVARFFSASCVPGADQFPNLCRLCAGKCAFSSQE..PYFSYSGAFKCLRDGAGDVAFIRESTVFEDLSAERDEYELLCPDNTRKPVDKFKDCHLARVPS : D88510
D88510        : HYYAVAVVKNSSNFHLNQLQGLRSCHTGIGRSAGWKIPIGTLRPYLNWNG...PPASLEEAVSKFFSKSCVPGAQRFPNLCSSCAGKCASSPEE..PYSGYAGALRCLRDNAGDVAFTRGSTVFEELPAERDQYKLLCPDNTWKPVTEYKECHLAQVPS : S68986
S68986        : RYEGIILVKKNNIHSLKELRGAKSCHTGFGRNVGFKIPVTKLKNAHILKVELTATERELKALSEFFSESCLVGTYKYPNLCALCEKPEQCNYPD..KFSGYDGAIRCLDKGKGEVAFTKVQFIKKYFGGDPSEFEYLCEDGSRRPLNGPA.CSWAQRPW : DSU77059
DSU77059      : SYFGIGVVKASTGKNTASLQGKDSCHTGYRKTAGWSCLLAPCCLRESSQRRMEMCGQMQVPVADFFGRVCAPRATIWEPLCELCKEPCAANPTQEVPYYDYTGAFKCMKEGAPRVGWVKHTTLDDYNRQSVADYAILCTDGCRAWTEENYKCNNGESAS : GADTRNSFRR
GADTRNSFRR    : CYYAVAVVKKDTGFSFKQLRGKKSCHTGIGKTAGWNIPIGTLLTTGQLVWSGQEDLPVES.VSTFFSKSCVPGAGVGGKLCTLCPSDCSKSATN..PYFGYAGAFKCLKDDAGDVAFINHLTVPA...SEKANYELLCLDGTRAPIDSYKTCNLARVPA : D64033
D64033        : CYYAVAVAKKGTTFGIRDLRGKKSCHTGLGKSAGWNIPIGTLVSMDIIQWAGVEDKPVEEEVSTFFQASCVPGATRGSKLCELCKGDCSRSQKE..PYYDYNGAFNCLAEGAGDVAFVKHLTVPD...QEKSKYELLCRDNTRAPIDDYKKCNLARVPA : TRFE_HORSE
TRFE_HORSE    : HYYAVAVVKKNSNFQLNQLQGKKSCHTGLGRSAGWNIPIGLLYWQLPE.....PRESLQKAVSNFFAGSCVPCADAVPNLCQLCVGKCACSNHE..PYFGYSGAFKCLADGAGDVAFVKHSTVLENLPADRDEYQLLCRDNTRKSVDEYKDCYLASIPS : BTU02564
BTU02564      : HYYAVAVVKKDTDFKLNELRGKKSCHTGLGRSAGWNIPMAKLYKELPD.....PQESIQRAAANFFSASCVPCADSFPKLCQLCAGKCACSNHE..PYFGYSGAFKCLMEGAGDVAFVKHSTVFDNLPEDRKNYELLCGDNTRKSVDDYQECYLAMVPS : HUMTFA
HUMTFA        : GYFAVAVVKKSSDLTWDNLKGKKSCHTAVGRTAGWNIPMGLLYN......KINHCRFD....EFFS.EGCAPGSK.DSSLCKLCMGLCEPNNKE..GYYGYTGAFRCLVE.KGDVAFVKHQTVPQNTGLNEKDYELLCLDGTRKPVEEYANCHLARAPN : GGEOS47GN
GGEOS47GN     : AYYAVALVKRNNAFTINDLKGKKSCHTGLGRTAGWNIPIGMLVKKGFI..NPRDCNIPQAVSEFFS.ASCVPSAEYPSTLCQLCIGKCSASSQE..RYYSYNGAFRCLAEDAGDVAFVKHSTVFENTDLKSSGFQLLCRNGARAEVTQFAQCHLARVPA : TRFM_HUMAN
TRFM_HUMAN    : SYYAVAVVRR.SHVTIDTLKGVKSCHTGINRTVGWNVPVGYLVESGRL..SVMGCDVLKAVSDYFG.GSCVPGAGYSESLCRLCRGVCDKSPLE..RYYDYSGAFRCLAEGAGDVAFVKHSTVLENTDLLSQDFELLCRDGSRADVTEWRQCHLARVPA : TRF_BLADI
TRF_BLADI     : LYYAVAVVRKDTYQSIEDLRGAKSCHTGYGRNAGWNVPLYTLLSKELI..SKNSCPYSSALSSYFSGGSCVPGAQNPDSLCSICAGKCSASNDE..SFFGYSGAFRCLASGEGQVAFVKHTTVPENTDLRSEDFELLCADGGRASINEYSRCHLAEVPP : PLU81824
PLU81824      : SYYAVAVVRADNITSFSHLQGRKSCHTGIGKTAGWKLPLATLLQLGLI..DPSHCNYVSAAAEFFSGGSCAPGAKYVDRLCSLCIGQCARSSDE..PFYSYSGAFRCLVQGGGDVAFVKHSTVPDNTDLQSDRYKLLCPSGGTAAISEFRSCNLALVPA : SAX_RANCA
SAX_RANCA     : CHYAVAMVKKSSAFQFNQLKGKRSCHSGVSKTDGWKALVTVLVEKKLLSWDGPAKESIQRAMSKFFSVSCIPGAT.QTNLCKQCKGNCKNSHDE..PYYGNYGAFRCLKEDMGDVAFLRSTALSD...EHSEVYELLCPDNTRKPLNKYKECNLGTVPA : TRF_MANSE
TRF_MANSE     : PNYAVAVVKKGAYNKIDDLRGKKSCHSSYSTFSGLHAPLFYLINKRAIQ....SDHCVKNLGEFFSGGSCLPGVD...KPENNPSGDVSKLKKQ...CGSDSSAWKCLEEDRGDVAFVSSADLSH...FDANQYELLCLNGGRDVLSSFATCNVAMAPS : D87272

              : 94--------104-------114-------124-------134-------139-------149-------159-------171-------176-------188-------198-------208-------218-------230-------240------ :
OrigSeq       : SYYAVAVVKKGTDFMIKDLRGKTSCHTGLGRSAGWNIPIGTLIHREDIEWEGIESGSVEQAVAKFFSASCVPGATIEQKLCRQCKGDAKTKCLRNAPYSGYSGAFQCLKDGKGDVAFVKHTTVQENAPEEKDEYELLCLDGSRQPVDSYKTCNWARVAA :OrigSeq
cons          : -EEEEEEEE-----------------------------EEEEEE------------HHHHHHHHHH--------------HH---------------------HHHHHHH----EEEEEE-------------EEEEE--------------------- :cons
dsc           : ---EEEE-----HHHHHHH--------------------HHHHHHH----------HHHHHHHHHH--------------HH---------------------HHHHHHH----EEE-------------HHHHHHHHH--------------HH---- :dsc
mul           : --HHHHHH------HHHH---------------------EEEE--------------HHHHHHHH---------------HHHH--------------------EEEE-----HHHHHHH-------------HHHE---------------------- :mul
nnssp         : EEEEEEEEE-----EE-----------------------------------------HHHHHHHH--------------------------------------HHHHHH-----EEEEE--------------EEEEE--------------------- :nnssp
phd           : -EEEEEEEE--------------------------EEEEEEEEE-----------HHHHHHHHHHH-----------HHHHHH------------------HHHHHHHHH----EEEEEEEEE----------EEEEE--------HHHHHHH------ :phd
pred          : ---HHHHH------------------------------EEEEE-------------HHHHHHHHHH------------------------------------------------EEEEEE--------------EEEE--------------------- :pred
zpred         : EHHHHHHHHH---EEHHHH----EEEE--------EEEEEEEE--------------HHHHHHH---------------------------------------EEEEE----HHHHHHH-----------HHHHHEEE--------------EEEE--- :zpred


access        : E-BBBBBBEEEBEBBBEEBEEEEBBBEBBBEEBBBBBBBBBBBBEEBBEBEEEEEEBBEEBBBEBBBBBBBEBBE-BEEBBEBBEEEBB-EEEEEBE-BB-BBBBEBBEEEEEEBBBBEBBBBBEEBEEEEEEBEBBBEEEEEEBBEEBEEBBBBEBEE : access

PHD Rel       : 968999992386211111576542124443245513334233221224568886324789999863344367777872466403554356787899644311477778746584389997431258977542347741257877512122221211499 : PHD Rel
Pred Rel      : 006600066899965557779770077877889998700007658887877889977888888856677799998899856656899999977999997886665665579988899886766767777768887970999977888550677656000 : Predator Rel


dssp          : -EEEEEEEE------HHH-----EEE---------HHHHHHHHH-------------HHHHHH-----EE----------E------------------HHHHHHHHHH-----EEEEE--HHHHH-HHHHHHEEEE-----EEEHHHHHH---EEE-- :dssp
define        : -EEEEE-----------------EEEE--------HHHHHHHHHHHEEEE------HHHHHHHHHH--EEEEEEEEHHHHHHEEEE-------------HHHHHHHHHHHH---EEEE--HHHHHHH--------------EEEE---------EEEEE :define
stride        : -EEEEEEEE-------------EEEE--------HHHHHHHHH--------------HHHHHHH---EEE----------E-------------------HHHHHHHHHH----EEEEE-----------HHHEEEE-----EE----HHH---EEE-- :stride


Q3 values for 1ovb-1-GJB  View SS in Rasmol

	dssp	define	stride
phd	66.04	56.60	71.70
dsc	62.89	55.97	67.92
pred	58.49	50.94	67.30
mul	54.72	45.28	59.75
nnssp	68.55	54.09	76.73
zpred	57.86	40.25	62.89
cons	66.67	58.49	76.10