Results for 1pbp-2-DOMAK


1pbp-2-DOMAK    : GVVLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRRADGSGDSFVFTSYLAKVNEEWKNNVGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGYVEYAYAKQNNLAYTKLISADGKPVSPTEENFANAAKGADWSKTFAQDLTNQKGEDAWPIT : MLU151843
MLU151843       : PIAITYNVNGLS..SLNLDGPTTAKIFNGSIASWNDPAIQALNTGVALPAEPIHVVFRNDESGTTDNFQRYLDVASGEWGKGIG..KTFKGGVGEGAKGNDGTSAAVKSTEGSITYNEWSFASARKLNTAKIATSADPPIAISVDSVGKTISGATIINDLVLDTVSFYKPGSYPIV : PMU75514
PMU75514        : TIAFGYNYDCD....LKLTQEQAVRVAMGMVKNWKELGCKS.....G....KLTWAHRSDGSGTTKAFTNSMEAFSPTWTLGTG..KSVKWPAGVGAKGNSGVAGVIQNTPGAIGYVNQSYIKGN.VKAAALQNLSGEFLKPSVEAGAKALNGITLDENLAGKNPNPTAKGAYPIA : MISPT1
MISPT1          : AQQVNYNLPGVHQ.HLKLNGKVLAGMYRGTIKTWNDPQIAGINPGLQLPATPVVPLHRSDGSGSTFQFTQYLSKQDDGWGRSPGFGTTVSFPAVLGENGDGAMVTGCAANPGCVAYTSIGSLDEADLGEAKLGNASGKYLLPNAKSIQAAAAGFASKANQAISLINGPATDGYPIV : S54861
S54861          : PIAITYNIKGVS..TLNLDGPTTAKIFNGTITVWNDPQIQALNSGTDLPPTPISVIFRSDKSGTSDNFQKYLDGASGAWGKGAS..ETFNGGVGVGASGNNGTSALLQTTDGSITYNEWSFAVGKQLNMAQIITSAGPPVAITTESVGKTIAGAKIMNDLVLDTSSFYRPGSYPIV : NRL_1ABH
NRL_1ABH        : GVVLAVNIGGLKSGELVLDGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRRADGSGTSFVFTSYLAKVNEEWKNNVGTGSTVKWPIGLGGKGNEGIAAFVQRLPGAIGYVEYAYAKQNNLAYTKLISADGKPVSPTEENFANAAKGADWSKTFAQDLTNQKGEDAWPIT : MLU1518224
MLU1518224      : PVALVYNLPGVQ..MLTVNSDVLAKIFSGVITTWNDGILAALNPGVVLPNLRIMPIYRADASGTTDNLQKYLTTDAQSWAKGVG..AEFQGGVGEGVQKSAGVIQAVQTTPGAFGYVEKSFADRAGLPFAQIDTGSGG.VPLTDDTARNGINAANFVNDLVLDLNAMYSTNAYPLV : S74876
S74876          : AVAVVYNLPGKK...VQLSRIALGKIFTGELKTWNQVDSKL.......PNTPIRVVVRADGSGTTDIFTSHLSAISSTFRSKIGASQDPNWGFQLKGPKNDGVAATVKQTPGAIGYVQDTFARRNELQTAKVQNKAGQYVEPSLAEANKAISGAKFDANFVAEISDPASG..YPIV : F64426
F64426          : AVVVTYNIPEIGDKTLKLSRDVLADIFLGKIEYWDDERIKKINPEIALPHEKIIVVHRSDASGTTAIFTTYLSLISKEWAEKVGAGKTVNWPTDVAGKGNPGVVAIVKSTPYTVAYTELSYAIEQKLPVAALENKNGKFVKPTDETIKAAVSAVKASEGYKEDLKQMLDANAYPIV : PSTS_HAEIN
PSTS_HAEIN      : GIVPVVNLPEIKPGKLKLSGKLLAEIFLGKIKKWNDPDLVALNPTLPLPNKNIIVIHRSDGSGTTFGFTNYLSKISNDWKNQVGEGKSVKWLTGQGGKGNEGVASYVRQMKYSIGYVEYAYAKQNQLAWISLQNQAGQFVQPSNESFMAAASHAKWHAGMGVILTNETGEKSWPIT : XOPHOX
XOPHOX          : GVVPVVNVPGVAAGALKLDGKTLGDIFLGKVSTWNDPAIAALNPGVKLPEGKITVVHRSDGSGTSFNFTNYLSKVNPDWKSKVGEGTAVQWPTGIGGKGNEGVAAYVKQIKGGIGYVELSYALQNKMAYTAMKNAAGKFVQPSDETFAAAANSADWGKDFYLVMTNAAGDNAWPIT : S74423
S74423          : SIVMAYNLPGVEG..LKLSQEALAGIMLGNITKWNDPKLVADNPDLTLPDRPITVVHRSDGSGTTAVFTMNLAAMSPEFKETIGDGKTVEWPTSIGGKGNEGVTAGIQQNEGAIGYVEYGYATNNNLTMASLQNKDGQFVVPTDENASATLAAVELPENLREFITNPAGADSYPIV : PLAS_SYNP7

                : 78--------88--------98--------108-------118-------128-------138-------148-------158-------168-------178-------188-------198-------208-------218-------228-------238-------248--- :
OrigSeq         : GVVLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRRADGSGDSFVFTSYLAKVNEEWKNNVGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGYVEYAYAKQNNLAYTKLISADGKPVSPTEENFANAAKGADWSKTFAQDLTNQKGEDAWPIT :OrigSeq
cons            : -EEEEE---------E----HHHHHHHH------------------------EEEEEE-------HHHHHHHHHHHHHHH-------EEEE-----------EEEEEE-----EEEEEHHHH--H-HHHHHHHH---------HHHHHHHHHHHHHHHHHHHHH------------ :cons
dsc             : --EEEE---------EEE--HHHHHHHH--------HHHHH-----------EEEEEE--------HHHHHHH-----HH-------EEEEEEEE-------EEEE-------EEEEEHHHHHH--HHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHH----------- :dsc
mul             : -EEEEEE--------HH-----HHHHH-----------H-------------EEEEE----------EE----------------------------------EEEE-------EEEEEHHH----HHHHHH---------------HHHHHHHHH--HHHHH------------- :mul
nnssp           : EEEEEE---------------HHHHHHH------------------------EEEEE--------HHHHHHHHHHHHHHH-----------------------EEEE------EEEE-----------HHHHH----------HHHHHHHHH-------HHHHH----------EE :nnssp
phd             : -EEEEEE--------E---HHHEEEEE-EEEEE-------------------EEEEEEE-----HHHHHHHHHHHHHHHHH------EEEE-----------EEEEEE----EEEEEEEEEE--HHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHE-------------- :phd
pred            : ---EEE---------------HHHHHHH------------------------EEEEEE-----------------------------EEE------------EEEEEE------EEEEHHHHHHH--------------------HHHHHHHHH---------------------- :pred
zpred           : EEEEEEEE------EEEHHHHHHEEEEEEE---------------------EEEEEEEE------EEEEEE------------------EEEE--------EEEEEEEE---EEEEEEEHHHHHHHHHHHHEE------EEE-HHHHHHHHHHHHHHHHHH-E---------EEEE :zpred


access          : EBBBBBBBEEBEEEEBEBEBEBBBEBBBBEBEE-EEEBBBBB-EEBEBEEEEBBBBB-BEEEEEBBBBBEBBBEBEEEBEEEBEEEEEBEBBBEBEBEEEEBBBBBBEEBEEBBBBBBBBBBEEEEBBBBEBBEEEEEBBEBBEEEBBEBBEBBEBBEEBBBBBBEEEEEEB-EBE : access

PHD Rel         : 95999814777677211231212343101243216643122489976899874999982898943689997785411223137987510212443555763337988716871799785341212245665553177755764378998875333212223101235777999789 : PHD Rel
Pred Rel        : 00005509999776555576665666666666778975676899007999978999908990987665586856877997768999775788877889997707685579999665555578766666775767999877867776888888656775765555799999998000 : Predator Rel


dssp            : EEEEEE----------EE-HHHHHHHHH----E---HHHHHH---------E-EEEEE----HHHHHHHHHHHHH-HHHHHH------------EEE-HHHHHHHHHHH---EEEEEEHHHHHH---EE-EEE-----EE---HHHHHHHH-------------E---------EE :dssp
define          : EEEEEEE-------EEEEEHHHHHHHHHHEEEE--HHHHHHHHH--EEEEEEEEEEE----HHHHHHHHHHHHHHHHHHHHHH----------EEEEEHHHHHHHHHHHH-EEEEEEEHHHHHHHEEEEEEEE----EEEEEHHHHHHHHHH------------------------ :define
stride          : EEEEEEE---------EE-HHHHHHHHH----E---HHHHHH---------E-EEEEE----HHHHHHHHHHHHH-HHHHHHH-----------EEE--HHHHHHHHHH---EEEEEEHHHHHHH--EE-EEE-----EE---HHHHHHHHH---HHH------E---------EE :stride


Q3 values for 1pbp-2-DOMAK  View SS in Rasmol

	dssp	define	stride
phd	55.11	50.00	58.52
dsc	63.07	50.57	64.20
pred	60.23	46.02	59.09
mul	53.41	42.05	53.41
nnssp	67.61	52.84	65.34
zpred	52.27	45.45	55.68
cons	61.36	50.57	63.64