Results for 1pda-2-AS


1pda-2-AS    : CEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGA : JQ2278
JQ2278       : LPREDVRDAFISLSAASLADLPAGSVIGTASLRRKSQILHRYPSLTVQDFRGNVQTRLRKLSEGVVKATLLALAGLKRLNMTENVTSTLSIDDMLPAVAQGA : HEM3_YERPE
HEM3_YERPE   : CEREDPRDAFVSSHYAHLDDLPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLGLGKPN................. : HEM3_HUMAN
HEM3_HUMAN   : CKRENPHDAVVFFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQGA : D89238
D89238       : PKRSCPLDAIVFSHYKTVADLPPGSVVGTSSIRRRALLARNFPHLRFVDIRGNVGTRLAKLDAPQFDCLVLAAAGLFRLGLKDRIAQMLTAPFVYYAVGQGA : HEM3_YEAST
HEM3_YEAST   : TKRVDPTDCLVMSAYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPPYQCIILASAGLMRMGLENRITQRFHSDTMYHAVGQGA : S77147
S77147       : TKRVNPADALVLHQGKDLASLPEGAVIGTSSLRRLAQLRYHFPHLTFKDVRGNVNTRLAKLDSNEYDAIILAAAGLERLDMANRIDQLIPPEISLHAVGQGA : CHBHEMACD1
CHBHEMACD1   : PSVKTPR.RHHFQVRQGVDGPSAEAKMATSSLRRMSQLLSLRPDLEIMDIRGNLNTRFKKFDEGDFDAMMLAYAGVYRLEFS....EILPHETMLPAVGQGA : S72887
S72887       : PPRNDPRDAVVTRDELVLAELPAGSLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARPGRLDEVTETLDPVQMVPAPAQGA : HEM3_BACSU
HEM3_BACSU   : PEREDPRDALISKNRVKLSEMKKGAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKQ...EFLEPERCLPAVGQGA : HEM3_EUGGR
HEM3_EUGGR   : CKRHDPCDAIVFSNLKSLEDLPHGARVGTSSLRRQCQLLLKRPDLKFLELRGNVNTRLAKLDSGDYDAIILAAAGLKRLGFSDRVLNIIDPNVMCPAAGQGA : S41586
S41586       : CEREDPRDAFVSNTYASLEQLPAGSVVGTSRLGRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGVIRLGFESRIRSSISVDDSLPAGGQGA : I40810
I40810       : SKREDPRDAFIL..QNGENGEP....IGSSSLRRQLQLKELFPGCKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLESRI.RYFSVDEILPAASQGI : A64371
A64371       : LERDSYHDLLIW..KDIDFNEDSKIVIGTSSMRRRAFLKFIYPNAKFELLRGNVDTRLRKLKEGLYDAIVLSEAGIIRLGVSLED.NYKRLD.ILPAPAQGI : YLE5_CAEEL

             : 99--------109-------119-------129-------139-------149-------159-------169-------179-------189-------19 :
OrigSeq      : CEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGA :OrigSeq
cons         : --------EEEE-------------EE---HHHHHHHHHHH----EEEE----HHHHHHHH----HHHHHHHHHHHHH-----HHHH------HHHHH---- :cons
dsc          : -----------------HH----------HHHHHHHHHHHH---HHHHHH----HHHHHHHH---HHHHHHHHHHHHHHHHH-----------HHHHH---- :dsc
mul          : -------HHEE--------------EE-------HHHE-------HEE-------HHHHHH-----HHHHHHHHHHHH---H----HHH------------- :mul
nnssp        : --------EEEE-------------EE----HHHHHHHHHH-----EEE----HHHHHHHH------EEEHHHHHHHH-----HHHHH-------------- :nnssp
phd          : --------EEEE-------------EEE--HHHHHHHHHH-----EEEE----HHHHHH-----HHHHHHHHHHHHHH-----HHHH------HHHHH---- :phd
pred         : --------EEE--------------------HHHHHHHHHH----EEEE----HHHHHHHHH------EEE------------------------------- :pred
zpred        : -------HHHEE-------------EEEEE--EHHHEEE------EEEEEE---EEEEEEE---HHHHHHHHHHHHHEE----------------------- :zpred


access       : EEEEEEEEBBBBEB-EEBEE-EEEBBBBBBEBEEEBEBEEE-EEBEBEEBEEEBEEEBEE-EEEEBEBBBBBBBBBEEBEBEEEBEE-BEBEEBBEBBEEEE : access

PHD Rel      : 998898534774131011368988255133267999999627874463015871455422487517899999998886277631353147641134443999 : PHD Rel
Pred Rel     : 009000986777777787789999669667779999999969998688677776676668697870877789766655567767655678997877888000 : Predator Rel


dssp         : -------EEEE--------------EEE---HHHHHHHHHH----EEE-----HHHHHHHHH-----EEEEEHHHHHH---HHH--EE-------------- :dssp
define       : EEEEEEEEEEEE------------EEEEEEHHHHHHHHHHHH-EEEEEEEEEHHHHHHHHHHHH-------HHHHHHHHH------EEEE--EEEE----EE :define
stride       : E------EEEEE-----HHH-----EEE---HHHHHHHHHH----EEE-----HHHHHHHHHH----EEEEEHHHHHHH--HHH--EE-------------- :stride


Q3 values for 1pda-2-AS  View SS in Rasmol

	dssp	define	stride
phd	73.53	52.94	68.63
dsc	63.73	47.06	62.75
pred	82.35	53.92	75.49
mul	75.49	47.06	68.63
nnssp	86.27	57.84	81.37
zpred	60.78	46.08	56.86
cons	76.47	55.88	71.57