Results for 1pii-2-DOMAK


1pii-2-DOMAK    : ENKVCGLTRGQDAKAAYDAGAIYGGLIFVATSPRCVNVEQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLHGNEEQLYIDTLREALPAHVAIWKALSVGETLPAREFQHVDKYVLDNGQGGSGQRFDWSLLNGQSLGNVLLAGGLGADNCVEAAQTGCAGLDFNSAVESQPGIKDARLLASVF : ATU18969
ATU18969        : LVKMCGITSARDAAMAVEAGADFIGMIIWPHSKRSISLSVAKDISQVAREGGVGVFVEDDENTILRAADSSDLELVQLHGNSRAAFSRLVRRKVIYVLNANEDGKLLNVVPEED.GLADWILVDS...GSGKGFNWAQFKLPSRNGWLLAGGINPTNVSEALSLQPDGIDVSSGICG.DGIQKDKSISSFI : TRPC_ASPAW
TRPC_ASPAW      : LVKICGTRSEEAARAAIEAGADLIGIIMVQGRTRCVPDDVALRISQVVKSIPVGVFQNQPLDYILSQQQKLGLDVVQLHGSEPLEWAKLIPVPVIRKFG.LDEPAIARRAYHS......LPLLDS...GTGELLDQSRVQNVLGLRVILAGGLDPTNVAGIVQRKVVGVDVSSGVES.DGAQDLGKIRAFV : TRPF_YEAST
TRPF_YEAST      : LVKVCGLQSTEAAECALDSDADLLGIICVPNRKRTIDPVIARKISTLVKAYKVGVFRNQPKEDVLALVNDYGIDIVQLHGDEWQEYQEFLGLPVIKRLVFPKDCNILLSAASQK.PHSFIPLFDS...GTGELLDWNSISDWVSLHFMLAGGLTPENVGDALRNGVIGVDVSGGVET.NGVKDSNKIANFV : TRPC_EMENI
TRPC_EMENI      : LVKICGTRTEEGARAAIEAGADLIGIILVEGRKRTVPDDVALQISKVVKSTPVGVFLNQPLSYVLAQQQKLGLDVVQLHGSEPLEWSRLIPVPVIRKFG.LDEFGIARRAYHT......VPLLDS...GSGELLDQMRVKQILGLRVILAGGLDPLNVTEIIKYKIVGVDVSSGVET.NGVQDLDKIRSFV : TRPF_CANAL
TRPF_CANAL      : VVKICGIKTVEAASVAIDNGANLLGCILVPNRARTIDLEVAKQIARMVKRDRVGVFRNQPKEEVFRIAREVGLDFIQLHGSEKLEFLGTEFL..IPRYVVPDELDLLEEQSLSL.QCVSLPLLDS...SEGKLLDWTFIEKLP.TKAILAGGLTPENLPTFDN..ILGYDVSGGVET.SGAKDSLKIIQFI : TRPF_KLULA
TRPF_KLULA      : LVKVCGLQTVEAAKTAVDDGADYLGIICVPGRKRTIDSSVAKGISTAVHQQEVGVFRNQSVDDVLQLYHEYNLDVIQLHGDEIKEYRSLIPIPIIKRFQFPQDCELLLDLYEH..VDNVLTLFDS...GTGEKLNWSAISSWSEIKFIIAGGLNPDNVSVAINPNAIGVDVSGGVET.DGIKDLEKVKLFI : TRPF_CANGA
TRPF_CANGA      : LVKVCGIQTVEAAETALQAGADLIGIICVPNRKRTIESAVAREISKLIHKSGVGVFRNQSVEDVHRLSEEYDLDIIQLHGDEWPEYYNVIKKPIIKRVIFPRDVDVVTQVCQRK.PLVCLPLFDS...GTVKELDWSSISSWANVFYILAGGLTAENVMEAVGPGVIGVDVSGGVET.DGVKDNDKIIKYV : SPTRP1
SPTRP1          : LVKVCGTRSLLAAKTIVESGGDLIGLIFVEKSKRKVDLSVAKEISHFVHTTNVGVFQNQPLEYIRSIIAEVNLDIVQLHGQEPFEWIHMLDRPVIKVFP.LNSSEISRPNYHI......VPLIDAYVGGLGKKVDWEAASFIP.VSYVLAGGLTPKNVQDAISSRPAVVDVSSGVET.DGKQDLEKIKAFI : S70355
S70355          : IVKICGLT.VEAAHCAISSGADLIGMILVPDLKRTVQQTKLKAISRAVTRIPVGVFRNQSLDEVLRMLRNYDLDIVQLHGSELHQWTREIPVPVIKKFGLGEDDLMAPGLHAVT.......LLDG...GEGQKISWEGLPGSG..AFMLAGGLTVDNVAVAVKPNVAGVDVSSGVAT.DGMQDLEKCRCLF : TRPG_NEUCR
TRPG_NEUCR      : LVKICGTRSAEAAAEAIKAGADLVGMIMVPGTKRCVDHETALSISQAVHMSKVGVFMNQPLEEVLEKQHLYDLDIVQLHGDEPLEWANLIPVPVVRKFK.PGQVGLATRGYHA......VPLLDS....SGTLLDLESVKKELQVTVLLAGGLEPSNVVETVKERVIGVDVSSGVEE.GGKQSLEKIREFV : TRPC_PENCH
TRPC_PENCH      : LVKICGTRTEEGALAAIQAGADLIGIIMVQGRSRLVPDDVALGISRVVKSTPVGVFMNQPLSYVVSQQQKLGLDVVQLHGSEPLEWSSLIPVPVIRKFA.PGDIGIARRAYHT......LPLLDS...GSGELLEESGVKKVLGLRVILAGGLNPDNVAGTVKQKVVGLDVSSGVET.NGAQDLEKIRAFV : TRPC_BRELA
TRPC_BRELA      : PNKVCGLTSPSAAQTARAAGAVYGGLIFEEASPRNVSRETSQKIIAAEPNLRVAVSRRTSG...YKDLLVDGIFAVQIHAPLSVEAEKALIEEVGPQVQVWRAISMSSPLGAEV..DVDKLILDAHE.GSGEVFDWATVPAAV.AKSLLAGGISPDNAAQALAVGCAGLDINSGVEYPAGTWGWGECRRAA : TRPC_VIBPA
TRPC_VIBPA      : ENKVCGLTHPDDAAKAYQAGAVFGGLIFVEKSKRAVDFESARLTMSGAPLNYVGVFQNHDVDYVASIVTSLGLKAVQLHGLEDQEYVNQLKTELPVGVEIWKAYGVADTKPSLL..NIDRHLLDAQVGGTGHVFDWSLIGD..PSQIMLAGGLSPENAQQAAKLACLGLDLNSGVESAPGKKDSQKLQAAF : BAU091853
BAU091853       : NNKICGLTRVEDARMSKDFGAIYGGFIFCKSSKRYVNLKKAMNITKNVHMKYIGVFCNENISTISYIIDKIPLYAIQLHGNENQFYIDCLKKKIPKCVRVWKAISLNGEKKHANFDNVNKHVFDNIHGGSGTPFNWYLLKNYNLKNVILAGGLNIKNCISASDLGCFGLDFNSGIEISPGLKDKKKTFLIF : TRPC_BUCAP
TRPC_BUCAP      : DNKVCGLTRIIDAKIVESCGAVYGGLIFADNSLRKTNEKIAEKMIFENNLRFIGVFQNQDIEKIVNIAQRLSLYAVQLHGSENQKYINILRKKLCKKIKIWKAFSIQSTLPLLNWDHIDKYIFDSGSGGTNKTFNWSILKGSILENVILAGGINTDNVLIASQLNCSGLDFNSGVEKSPGIKDHKKISLIF : TRPC_HAEIN
TRPC_HAEIN      : ENKVCGLTRAQDVKIVYENGALYGGLIFAEHSKRSVSLRQAQELVTAAPLRFVGVFQNQEIDFIVKIASQLQLYAVQLHGAETEAFITALRQQLPKNTQIWKAISVNTEAQSAVDLNVDRYIFDSQTAGTGKTFDWSLIPENLKHKIILAGGISPNNVEQAIAQGCLGLDLNSGVESSAGVKDQEKVRLVF : TRPF_HALVO
TRPF_HALVO      : RVKVCGVTDETDLAAVDAAGADAVGAICDVDTPREIPRERARELFAAAPPFLTLVTMPDSVDHARDLAREVGPDVLQLHGDFAADDLDSLRATGVGVVPVVDATDLARARDLAP..VVDAILVDTPSDGTGETHDWDASRDLV.APVILAGGLTPDNVVEAVRVEPYGVDVASGVEASGGVKDHDAVRAFV : C64356
C64356          : KVKICGITNEEDIAYISKK.VHAVGVIVDVKTPRKISLDKAIELKKYVAPFTVTVLMPNSIEEVLEIYNALKPNAIQLHGFE.LDFVKELNAHIIKVIHIPKDEEIDFKTLLNTYEYVEAILVDTKIELEGKTHNWAVSKKLREKPLILAGGLNKDNVLEAIKVKPYAIDVSSSLEAY.GKKDLKKVDEFL : S76407
S76407          : EVKICGLRHPAQAQAIAALGFTTLGFICVEASSRYVSSREIELVLQSLTAHNIGVFANVSLPKLGEFLAQTSLNGIQLHGDESPDFCRQVKHRLIKALRLRRSADLERAEAYYN..AVDVLLLDAYHPGTGQTLPWQKLQQFR.LPWWLAGGLTPSNVQEALNLQPDGIDLSSGVEQGPADKDVAKVAQLR : TRPC_PHYPR
TRPC_PHYPR      : LAKVCGITTVEYALAALRNGANMIGIIMAEHSPRYVEKEEAKAIAKAVREYGVGVFVNKTATEMNAAAEEIGLDLVQLHGDEGFEICKDIKYPTIRALHLPDTAQCDGVDAEAVSELANYILLDTTVKGTGVAFDWKIAAIFT.LPCLMAGGLTPENVVKALSGHPVGVDVSSGVEVKPGVKDLDKVAAFL : S59048
S59048          : RVKICGITNLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVVGVFVNEEPEKILDVASYVQLNAVQLHGEEPIELCRKIAILVIKAVGVSNERDMERALNYR....EFPILLDTKTPGSGKTFDWSLILPYRFRYLVLSGGLNPENVRSAIDVRPFAVDVSSGVEAF.GKKDHDSIKMFI : PSEPAI
PSEPAI          : RIKICGITRVEDALAAAAAGADAIGLVFYAKSPRAVDIHRAREIVRALPPFVVGLFVNASRCELGEILDAVPLDLLQFHGDERAEDCEG..RPYLKALRMKPGDDIVGRAAAYP..GAAGILLDTYVEGTGAAFDWSLVPTDL...LVLAGGLTPDNVGRAVEVKPYAVDVSGGVEASKGIKDAARVRAFV : TRPF_ACICA
TRPF_ACICA      : RAKICGITRSQDVQAAVSAGADAIGLVFFPPSPRHVSIAQAQALLQHIPAYVVGLFVNATADQIKSVLDCVALDVLQLHGDETPEQCQEIARRWYKAIQVKPELDVVDEVQRYQ.AGASAVLLDAWHPGTGHQFDWSKFP.KL...LILAGGLTPENVVDAIQTHAFAVDVSGGVEAAKGIKDKQLIERFM : TRPF_CAUCR
TRPF_CAUCR      : GAKICGLSTPETVKAAFDGAAAFLGFVFFDKSPRNVAPEVAARLVEPVRGRGVAVTVDPDDALIDRLMATMRPDLIQVHGKETPSRVREIAVGVIKAFSVSSSADVDQAAAFDG..VAQHLMFDARPVGTGARFDWGLLAGRR.RPHFLAGGLDPWNVGEAIKSGTPLVDVSSGVERGPGLKDPALISAFL : TRPF_LACCA
TRPF_LACCA      : LVKICGLMHSEDILAVNTAGADFAGFVFAP.GRHQVSLEQALALNQLLHSKIVGVFVNEPVAEILAIYQAGAIDVAQLHGKSTPAEITQLQQAGLKVIQVFERQAIDLTSMAD......YLMVDS...GSGQLLNLKAIPHIS.RPLILAGGLTPLNVRQAVQVQPTMVDVSSGVET.NGHKDADKITQFI : TRPF_LACLA
TRPF_LACLA      : KIKICGLSTKEAVDTAVESGVTHLGFILSP.SKRQVAPEKILQITNDVPKTVVGVFVDEPIDFVKKAIQVAQLDLVQLHGNEDMNYINQLDISVIKAIR..PDQEFKEYEDVI.......LLFDS...GSGQAFDWDSLVTSG.NKFFIAGGLNPENVAAAIQPNAYGVDVSSGVET.DGIKNLTKIKNFV : TRPF_BACSU
TRPF_BACSU      : ALKYCGIRSLQDLQLAADSQADYLGFIFAE.SYRKVSPQDVKKWLSQVCVEKAGVFVNESIETMSRIAEDLNLDVIQLHGDEEPADADALRCEIWKALHHHENTTQEIARFKDD...VDGFVIDSSVKGTGVAFSWDCVPEYQ.KRCFIAGGVNPDTITDLMKYQPAGIDLASGIEK.NGQKDQNLMRLLE : TRPF_METTH
TRPF_METTH      : KIKICGLTREEDVVLADSLGADLLGFIHARRSPRHLELGDVAELSSLIPDEKVLVTETSETSRIMEAIDKTGIERIQLHSVSTAGKIHESLYSLELTLAVPPLSSHICGHEFQG...ISGLILDSASGGTGKIIPSDALELLASLRVTLAGGLTLEFVRKNRESKFDCLDFNSGIETGPGVKDHEMLMNYI : ARYA_MANSE

                : 256-------266-------276-------286-------296-------306-------316-------326-------336-------346-------356-------366-------376-------386-------396-------406-------416-------426-------436-------4 :
OrigSeq         : ENKVCGLTRGQDAKAAYDAGAIYGGLIFVATSPRCVNVEQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLHGNEEQLYIDTLREALPAHVAIWKALSVGETLPAREFQHVDKYVLDNGQGGSGQRFDWSLLNGQSLGNVLLAGGLGADNCVEAAQTGCAGLDFNSAVESQPGIKDARLLASVF :OrigSeq
cons            : --EEE----HHHHHHHHHH---EEEEEEE-------HHHHHHHHHHHH---EEEEEE---HHHHHHHHHHH-HHHHHH-----HHHHHHHHHHHHHHEEEE----------HHHHHHHHHEEEE----------EHHHHHHHH---EEE------HHHHHHHH----EEEE-----------HHHHHHH-- :cons
dsc             : --------HHHHHHHHHHHHHHHHEEEE------HHHHHHHHHHHHHH---EEEEE----HHHHHHHHHHHHHHHHHH--------HHHHHH---HHHHHHHHHH------HHHHHHHHHHHHHH--------HHHHH---------EE-------HHHHHH-----EEEE---------HHHHHHHH--- :dsc
mul             : EEEEEEE----HHHHHHH-------EEEE--------HHHHHHHHHHH---EEEEE-----HHHHHHHHHHHHHHHHH------HHHHHHHHHHEEE-H----HHHHHHHHHH------EEEE--------------HH------EEEEE---------HHH----E------------------HHHHHE :mul
nnssp           : --EEE----HHHHHHHHHH---EEEEEEE--------HHHHHHHHHHH----EEEEE---HHHHHHHHHHH---EEEE-----HHHHHHHHHHHHHHEE-----------HHHHHHHHHHHHH-------------HHHHHHH---EEE-----HHHHHHHHH-----EE-------------HHHHHHHH :nnssp
phd             : --EEE----HHHHHHHHHH---EEEEEEEE------HHHHHHHHHHHH---EEEEEE---HHHHHHHHHHH-HHHHHH-----HHHHHHHHHHHEEEEEEE-----------------EEEEEE----------EHHHHHHHH-HHHHHH-----HHHHHHHHH---EEEE-----------HHHHHHH-- :phd
pred            : ---EEE--HHHHHHHHHHH----EEEEEE------HHHHHHHHHHHH--EEEEEEE----HHHHHHHHHHH--EEEEE-----HHHHHHHHHHHH--EEE--------------------EEE-----------------------EEE--------HHHHHH-------------------HHHHHH--- :pred
zpred           : HEEEEEEE-HHHHHHHHHHHHHHEEEEEE-----EEEHHHHHHHHHE----EEEEEE----HHHHHHHHHHHHHHEEEE----HHHHHHHH---EEEEE-----HHHHHH---------EEEEEE--------------------EEEEEEE----EEHHHHEEEEEEEEEEEEEE----HHHHHHHHHEH :zpred


access          : EBEBBBBE-BEBBEBBBEBBBEBBBBBBBEEEEE-BEEEBBEEBBEBBEBBBBBBBBE-EBEEBBEBBEEBBBEBBEB-EEE--EBBEEBB-EBBEBBEBBEEBEBBBBBBBEEBEBBBBBBBEBEEEEEBEBBEBEBBEEBBBBBBBBBEEB--EEBBEBBEB-BBBBEBBEBBEB-EE-EEBEEB-BBB : access

PHD Rel         : 95373245558999999942112579999278543217899999986222236777167468999999762035422136201889863433211445641341122211122343331568735668766421212111211131352168671156888751553335167643566632366665239 : PHD Rel
Pred Rel        : 00555566667780988767666556076899987657889988886887698886799768888899885666666579997877888888508657776556868687688866685567778999999766765778888966665788999708777778886686889776879997787676000 : Predator Rel


dssp            : --EE-----HHHHHHHHHH---EEEEE-------E--HHHHHHHHHH---EEEEEE----HHHHHHHHHHH---EEEE-----HHHHHHHHHH-----EEEEEEE--------------EEEEE-----------HHHH-------EEEE-------HHHHH-----EEEE-HHHEEE--EE-HHHHHHHH :dssp
define          : EEEEEEE-HHHHHHHHHHHH--EEEEEE-----EEEEHHHHHHHHHHH--EEEEEEEE-HHHHHHHHH------EEEE----HHHHHHHHHHHH---EEEEEEEEE--EEEEE------EEEEE---------------------EEEEEEE----HHHHHHHH---EEEE-----------HHHHHHHHH :define
stride          : --EE-----HHHHHHHHHH---EEEEE----------HHHHHHHHHH---EEEEEE----HHHHHHHHHHH---EEEE-----HHHHHHHHHH-----EEEEEEE--------------EEEEE-----------HHHH-------EEEE------HHHHHHH----EEEE-HHHEEE--EE-HHHHHHHH :stride


Q3 values for 1pii-2-DOMAK  View SS in Rasmol

	dssp	define	stride
phd	73.30	69.11	74.87
dsc	64.92	58.12	64.92
pred	76.96	74.87	77.49
mul	65.45	64.40	64.92
nnssp	72.25	67.54	73.82
zpred	65.97	69.11	65.45
cons	72.77	68.06	74.35