Results for 1pkyc-2-AUTO.1


1pkyc-2-AUTO.1    : PEIRMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALP : KPYK_YEAST
KPYK_YEAST        : KDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQVLEVVDDKLKVKALNAGKICSHKGVNLPGTDVDLP : KPY1_FELCA
KPY1_FELCA        : EDENVLWLDYKNICKVVEVGSKVYVDDGLISLLVKEKGA.DLVTEVENGGSLGSKKGVNLPGAAVDLP : S71529S1
S71529S1          : TDAHTVWVDYPNIVKVVPVGGRIFIDDGLISLQVKKIDR.KLETQVENGGLLGSRKGVNLPGAEVDLP : KPYK_MYCGE
KPYK_MYCGE        : SDNQFAVSDASGMVNDVNIGQKILVDDGKLTLVVTRVDKQHVICVAKNDHTVFTKKRLNLPNAQYSIP : KPY2_ECOLI
KPY2_ECOLI        : KDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQG..VFTEVTVGGPLSNNKGINKLG..LSAE : MIU65430
MIU65430          : CSHDRVSTTYKKLAEDAAVGDRVLVDDGKVCLVVDGIE..GVICTVVEGGPVSNNKGISLPGMNVSAP : KPYC_SOLTU
KPYC_SOLTU        : GNEEMISMSYKKLVMDLKPGNTILCADGTITLTVLSCDPPSVRCRCENTATLGERKNVNLPGVVVDLP : STPYKFORF2
STPYKFORF2        : GNNEIVAVTYEGFTSDLSVGNTVLVDDGLIGMEVTAIEGNKCICKVLNNGDLGENKGVNLPGVSIALP : S51946
S51946            : PPERTVTVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIG..VKCLCTDPGLLLPRANLTFWGRNAMLP : KPY2_TRYBB
KPY2_TRYBB        : KTKEKFYIDYPQLTKAVPVGGSIYVDDGVMTLRVLSKEDDRLKCHVNNHHRLTDRRGINLPGCEVDLP : ZMLEAMGL3
ZMLEAMGL3         : GTKEKIAVTYAGLFDDVQVGGQVLFDDGLLGTTVLEKDVANLVVRVDNDGILGSRKGVNAPGVSINLP : S44287
S44287            : STEDTVSVNYDDFINDVEAGDILLVDGGMMSLAVKSKTS..VKCEVIDGGELKSRRHLNVRGKSATLP : MEU873165
MEU873165         : TDTDRVFLPHPEILSALEPSHGILIDDGKLRLIVTEVS..EAVTRVEVGGRISNRKGVSLPHTALPVP : AVU256344
AVU256344         : GMND.IPLPHREIFEVAVPGMDLLIDDGRIKVRIMEVM..DLVCEVLNGGALSNRKGVNVPGAVLDIS : AVU323754
AVU323754         : GLMD.IPLPHREIFAAVKPGDDLLIDDGRVRVRALGVS..DIDAKVIVAGPISNRKGVNLPGTVLDIS : A57418
A57418            : EDETTIPVEFKDLPKLVSKGDTIYLSDGYIMLRVEEVR..EVECVVVNGGILFSHKGINIP.ANLPIE : KPYK_BACPY
KPYK_BACPY        : .NNDVFSVSYDKLIEDVNEGSVILLDDGLIQLEVTGKDVARIHTLIINSGSLSNNKGVNIPGVSVQLP : KPYK_BACLI
KPYK_BACLI        : .TPDKISVTYDGLIHDVSVGSTILLDDGLVGLEVTDINKDKIVTKVMNSGTLKNKKGVNVPGVSVNLP : KPYK_BACST
KPYK_BACST        : .TPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAIVTTVLNGGVLKNKKGVNVPGVKVNLP : I40840
I40840            : VTHDRVSTTYKNLAKDAKPGDRLLVDDGKVGLVCVSVE..GVICEVVEGGPVSNNKGVSLPGMDISVP : S76677
S76677            : GHPGAVGIDYPHLATEAKVGERILLDDGLLEMKVVSIQ..DVICEVVTGGILKSRKGVNLPGLVLTLP : S77240
S77240            : EET.ISSISYEYLADEVPSGARILLDDGKLEMLVEEVDTVALHCRVIVGGTLSSNKGVNFPGVCLSVK : KPYK_LACLA
KPYK_LACLA        : STPELIALNVAGIFDDVEIGQTILIDDGKLGLSLTGKDAATFEVEAQNDGVIGKQKGVNIPNTKIPFP : KPYK_LACDE
KPYK_LACDE        : GNKDMIHVTYPGLFDDTHVGGTVLIDDGAVGLTIKAKDEEKLVCEAQNTGVIGSKKGVNAPGVEIRLP : KPY2_YEAST
KPY2_YEAST        : NNDKIMYIDYANLTKVIVPGRFIYVDDGILSFKVLQIIDESLRVQAVNSGYIASHKGVNLPNTDVDLP : KPYK_YARLI
KPYK_YARLI        : DDDKIMYIDYTNIVKQIDIGKIIFVDDGVLSFKVLEKIDGELKVETLNNGKISSRKGVNLPGTDVDLP : KPYK_TRIRE
KPYK_TRIRE        : TDTQNMYVDYKNITKVIQPGRVIYVDDGVLAFDVLSIKDDQVEVRARNNGFISSRKGVNLPNTDVDLP : JC2456
JC2456            : ETAEKFYVDYMNITKVVPVGGHIFVDDGLLDLIVVKISG.KIECVAQNTHTISNRKGINLPNADVDLP : LMPYK
LMPYK             : DTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHEDEQLECTVTNSHTISDRRGVNLPGCDVDLP : CEF25H52
CEF25H52          : ETAVNLFVDYKNIAKVLSVGSRVYIDDGLISLIVEELQT.DVICSVENGGMLGSRKGVNLPGTIVDLP : CEZK593
CEZK593           : FTSSHIYADYRNLPKVVQPGSRIYIDDGLISLIVESCEE.TVICTIENGGALGTRKGVNLPGTIVDLP : D64313
D64313            : GEKVVIGEDIKLNIDTIEEGHFILINDGKIKLRVVEKT...IIAVVEVGGEIKEGMGVNLP.TRIELP : CTU83196
CTU83196          : SESALLFIQVVY.SPYVRERAPVLIDDGYIQAVVVNAQ..EVEIEFQNSGEIKSNKSLSIK.IDVALP : AAU86079

                  : 70--------111-------121-------131-------141-------151-------161----- :
OrigSeq           : PEIRMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALP :OrigSeq
cons              : ----EEEEE-----EEE----EEEE---EEEEEEEE-----EEEEEE----EEE----E---EEEE-- :cons
dsc               : ----EEEEEE----EEEE---EEEE---EEEEEEEE-----EEEEEEE--EEEEEEEEE---EEE--- :dsc
mul               : ----EEEE-----H-H-----EEEE----EEEHHHHHH--HHEEEE------------------E--- :mul
nnssp             : ----EEEEE------------EEEE---EEEEEEE------EEEEE------------------EE-- :nnssp
phd               : ---EEEEEE----EEEE----EEEEE--EEEEEEEEE---EEEEEEE----EEE----E---EEEE-- :phd
pred              : ----EEE--------------EEEE----EEEEEE------EEEEEE--------------------- :pred
zpred             : ----EEEEE----EEEE---EEEEEEHHHHHEEHHHHH--HHEEEEE----------EEE---EEEEE :zpred

access            : EEEEBBBBBBEEBBEBBEBBBBBBBEEBBBBBBBBEBEEEEBBBBB-BEB-BEEEEBBEBEBBBBEBE : access

PHD Rel           : 98237888235532232156279993892899999855856999996399233044651561234429 : PHD Rel
Pred Rel          : 00666586778886666799989998997567777568776569967999878988888090088000 : Predator Rel

dssp              : ------------HHHH-----EEEE----EEEEEEEEE--EEEEEE-----------EE--------- :dssp
define            : -----EEEE--HHHHHH---EEEEE---EEEEEEE-----EEEEE----------EEEEE--EEEE-- :define
stride            : -----------HHHHH----EEEEEHHH-EEEEEEEEE--EEEEEE-----------EE--------- :stride

Q3 values for 1pkyc-2-AUTO.1  View SS in Rasmol

	dssp	define	stride
phd	66.18	69.12	60.29
dsc	58.82	67.65	51.47
pred	79.41	66.18	72.06
mul	75.00	63.24	67.65
nnssp	73.53	75.00	66.18
zpred	54.41	60.29	57.35
cons	66.18	72.06	58.82