Results for 1pkyc-3-AUTO.1


1pkyc-3-AUTO.1    : KLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL : S51374
S51374            : LRDPTEATAVGAVEASFKCSSGAIIVLTKSGRSAHLLSRYRPRAPIISVTRNGQTARQAHLYRGIFPVLYREAVDVDSRVNFAMDIGKARGFFKSGDVVIVLTGWRPGSGFTNTMRVVPV : KPY1_ECOLI
KPY1_ECOLI        : KLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVYG...FWCTGTERHY..... : S51946
S51946            : FDSISEEICNSAAKMANNLEVDALFVYTKNGHMASLLSRCRPDCPIFAFTTTTSVRRRLNLQWGLMPFRLSFSDDMESNLNKTFSLLKARGMIKSGDLIIAVSD......MLQSIQVMNV : KPYR_MOUSE
KPYR_MOUSE        : LRDPTEVTAIGAVEASFKCCAAAIIVLTKTGRSAQLLSRYRPRAAVIAVTRSAQAARQVHLSRGVFPLLYREPPDVDRRVQFGIESGKLRGFLRVGDLVIVVTGWRPGSGYTNIMRVLTI : MTCY01B28
MTCY01B28         : .RTKRGVISYAARDIGERLDAKALVAFTQSGDTVRRLARLHTPLPLLAFTAWPEVRSQLAMTWGTETFIVPKMQSTDGMIRQVDKSLLELARYKRGDLVVIVAGAPGTVGSTNLIHVHRI : A16530
A16530            : RTDTVESIAMAAVSASLELNAGAIVVLTTRGKTARYLSKYRPVSPIVMVTRNPAASRDSHLYRGVWPFLFPEKKDVDRRLKWGINHALKLGIINKGDNIVCVQGWRGGMGHTNTVRVVPA : KPY1_TRYBB
KPY1_TRYBB        : IMCPEEAVCSSAVASAFEVQAKAMLVLSNTGRSARLISKYRPNCPIICVTTRLQTCRQLNVTRSVVSVFYDAAKDKEKRVKLGLDFAKKEKYASTGDVVVVVHADHSVKGYPNQTRLIYL : ZMLEAMGL3
ZMLEAMGL3         : ..DSTEAVASAVSRIAHSVNAKAIVVSTNSGYTACMVSKYRPEVNILAVTYSERVQRGLTLNYGVLPVVYEAPATIDEMIALAKTAVKEQGLANSGDTIVIAAGVMSQSGTTNMITVQT. : CTU83196
CTU83196          : KSPYLEANWVFWIQIAEKASAKAIIVYTQTGGSPMFLSKYRPYLPIIAVTPNRNVYYRLAVEWGVYPMLTLESN.RTVWRHQACVYGVEKGILSNYDKILVFSRGAGMQDTNNLTLTTVH : S77240
S77240            : .TSIPNAISSAVSQIAETLNAAAIMSLTKTGSTARHVSKFRPKTPILAVTPHVDVSRQLQLVWGVKPLLVLDLPSTSQTFQAAINVAQENHFLRDGDLVVMTAGTQGVAGSTDLIKVEVV : MEU873165
MEU873165         : .PTASDAIAAAAHQIVEALSLRSIMAWTHSGSTVLRLARARPNASVIALTPKRETARRLTMAWGVHPIVTKDASDVDDMAFRAAKFAVRERFAEIGDRVIIVAGVFGIPGATNMVRIAFV : AVU323754
AVU323754         : .HTPPHAVATAAADVALALKAPVIVAFTVSGTTASRISRARPPLPILALTPSEQTARQLGLMWGVVSLLSPTVDTYEQSVDRATQAAVQTGLAEKSDQIVVVTGFFATAGSTNNLRVTQA : AVU256344
AVU256344         : .QSPPHAVATAAANVAVALGSPVVVAYTSSGTTAARISRARPALPILALTPSEQVARRLNMFWGVVGVRSQDVHTYEASLIHAQQAVQEAKLASPSDHIVIVAGFFAQQGSTNNLRVVQI : KPYK_BACPY
KPYK_BACPY        : .GNMTEAIGQAAAYTAINLKVKAVLAPTESGHTAKMIAKYRPGCPVIAVTSSEMCSRKLSLIWGVYPIVGKKASSIDEILQESVEESVKHQYVGHGDVVIITAGVVGEAGTTNLMKIHVI : KPYK_BACLI
KPYK_BACLI        : .MSITDAIGQSVAHTAINLDVNAIVTPTESGHTARMISKYRPQAPIVAVTVNDAVSRKLSLVFGVFATSGQNHSSTDEMLEKAVQKSLDTGIVRHGDLIVITAGAVGEAGTTNLMKVYVV : KPYK_BACST
KPYK_BACST        : .TTITDAIGQSVAHTALNLDVAAIVTPTVSGKTPQMVAKYRPKAPIIAVTSNEAVSRRLALVWGVYTKEAPHVNTTDEMLDVAVDAAVRSGLVKHGDLVVITAGVVGETGSTNLMKVHVI : KPYK_LACLA
KPYK_LACLA        : ..TVTEVVAASVKNAAEAMDVKLIVALTESGNTARLISKHRPDADILAITFDEKVERGLMINWGVIPMMTEKPASTDDMFEVAEKVALASGLVEAGDNIIIVAGVVGTGRTNTMRIRTVK : KPYK_LACDE
KPYK_LACDE        : KSNVTEAIGESVVRTAQELGVKTIIAATSSGYTARMISKYRPDATIVALTFDEKIQHSLGIVWGVEPVLAKKPSNTDEMFEEAARVAKEHGFVKDGDLVIIVAGVFGQSGTTNLMKLQII : JC2456
JC2456            : FLIPEEAICSSAVNSIFELHAKAILVLTNTGRSAHMVSKYRPPVPIICASQELDVCRLLSITRGTIPVYYDTEKDREKRVGLAIDVGKQMGVFKEGDVVVAVHADHHTKGFANQIRAIYI : LMPYK
LMPYK             : IMSADEAVCGSAVNSVSETKAKAMVVLSNTGAGARLVAKYRPNCPIVCVTTRLQTCRQLNITQGVESVFFDADKGKEHRVAAGVEFAKSKGYVQTGDYCVVIHADHKVKGYANQTRILLV : KPY2_YEAST
KPY2_YEAST        : KTSTTETVAAAATAAILEQDGKAIVVLSTTGNTARLLSKYRPSCPIILVTRHARTARIAHLYRGVFPFLYEPKRDVHRRLKFGVEMARSFGMVDNGDTVVSIQGFKGGVGHSNTLRISTV : KPYK_YARLI
KPYK_YARLI        : RTETVETIAISAVSASFEQQARAIIVLSTSGTSARLCSKYRPNCPILMVTRNAQAARFSHLYRGVYPFIYHKARDVEERLKWGMDEAVALGILNKGDVVVAIQGWTGGLADYKTYSMVIK : CEZK593
CEZK593           : KTGMTHTTAIAAVSATITCRAVAIILITTTGKTARLCSRYRPPVPIITVSRDERISRQLHLHRGIFPVYYPKGRDVEERVQYGVNLGKTRGFIHLGDPLIVITGWKQGAGFTNTMRIVVA : CEF25H52
CEF25H52          : KTDMSHTIAIAATSAAASCHASAILLITTTGRSAIQCSRYKPAVPILTISRDVAVCRQLHLYRGVFPVHYPAERDVDNRINHAIAIGKDRGFIHKGDFLVVVTGWRQGAGATNTLRIITA : I40840
I40840            : .RTKRGVISYSARDIAERLNARALVAFTTSGDTAKRVARLHSHLPLLVFTPNEAVRSELALTWGATTFLCPPVSDTDDMMREVDRALLAMPEYNKGDMMVVVAGSPGVTGNTNMIHVHLL : S44287
S44287            : YSHMGEMFAFHSSSMANTLST.PIIVFTRTGSMAIILSHNRPSSTVFAFTNNERVKQRLALYHGVVPIYMEFSSDAEETFSRAIKLLLSKSLVKDGQYVTLVQSGQPIWRSTHHIQVRKV : S76677
S76677            : ..TETHALSEALVVIDGILDLKYIVTFTTSGFTSLLASNQRPSVPVIAFTPSEKVYHSLNLVWGIIPFLINEEFTFEDLIQQAEVLLRDRKMVEKGDQLLIMAGITKIPRGTNFLKIHRI : D64313
D64313            : ..SIDEGLVYAVYELYKKLNTKLVITPTYSGRTAKLISKLRINSKIIAPTPNIRTLKRLRLVWGVESCLMEEFDDMEKIINTCREMAKK....EIGKGIYLITLGPIGQKKTNTIKVESI : LMPYK

                  : 351-------361-------371-------381-------391-------401-------411-------421-------431-------441-------451-------461------- :
OrigSeq           : KLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL :OrigSeq
cons              : -----HHHHHHHHHHHHHH---EEEEEE-----HHHHHH------EEEE----HHHHHEEEE---EEEE------HHHHHHHHHHHHHHHHHE----EEEEEE-----------EEEEE- :cons
dsc               : -----HHHHHHHHHHHHHH---EEEEE-----HHHHHH------EEEEE---HHHHHHEEEE----EEE-------HHHHHHHHHHHHHHHHH----EEEEEE------------EEE-- :dsc
mul               : -----HHHHHHHHHHHHHHHHHEEEEE-------EEEE-------EEEE--------HHHE----EEEEE-------HHHHHHHHHHHHH-H-----EEEEEE-----------EEEEEE :mul
nnssp             : ---HHHHHHHHHHHHHHHH---EEEEE------HHHHHH------EEEE----HHHHHHHHH-----EE------HHHHHHHHHHHHHHH-------EEEEEE-----------EEEEEE :nnssp
phd               : -----HHHHHHHHHHHHHH---EEEEEE-----HHHHHH------EEEE--------EEEEEE-EEEEEE-----HHHHHHHHHHHHHHHHEEE---EEEEEEE-------EEEEEEEE- :phd
pred              : ----HHHHHHHHHHHHHHHHHHEEEEEE----HHHHHHH-----EEEEEE---HHHHHHHHH---EEEE-------HHHHHHHHHHHHHHHH-----EEEEEE-----------EEE--- :pred
zpred             : ----HHHHHHHHHHHHHHHHHHHEEEEE-----EEEEE-----EEEEEEE---HHHHEEEEEEEEEEEE-----HHHHHHHHHHHHHHHHH------EEEEEE----------EEEEEEE :zpred


access            : EEEBEEBBBBBBBEBBBEBEBEBBBBBBEEEEBBEBBBEB-EEBBBBBBBEEEEBBEBBBBBBBBBBBBBEE-EEBEEBBEBBBEBBEEEEBBEEBEBBBBBBBB-EBEEBEEBBEBBBE : access

PHD Rel           : 998623468888999985323179999716932131132368851798413731211354542116774514673689999999998753224269779999842776763115888878 : PHD Rel
Pred Rel          : 006766888788888888555889908799995777775099986899757768888888786666667688677777888999898888667799890009689889999978557000 : Predator Rel


dssp              : ---HHHHHHHHHHHHHHH----EEEEE----HHHHHHH------EEEEEE--HHHHHHHHH---EEEEE------HHHHHHHHHHHHHHH-------EEEEEE----------EEEEEE- :dssp
define            : --HHHHHHHHHHHHHHHHHH--EEEEEEE-HHHHHHHHH---EEEEEEEEEHHHHHHHHH----EEEEEEE---HHHHHHHHHHHHHHHHH-----EEEEEEEEE------EEEEEEEEE :define
stride            : ---HHHHHHHHHHHHHHHH---EEEEE----HHHHHHHH-----EEEEEE--HHHHHHHHH---EEEEE------HHHHHHHHHHHHHHH-------EEEEEE----------EEEEEE- :stride


Q3 values for 1pkyc-3-AUTO.1  View SS in Rasmol

	dssp	define	stride
phd	76.67	72.50	78.33
dsc	85.00	70.83	85.00
pred	85.83	75.83	87.50
mul	76.67	65.83	76.67
nnssp	89.17	75.83	90.83
zpred	78.33	72.50	78.33
cons	84.17	73.33	85.83