Results for 1ptx-1-AS


1ptx-1-AS    : VKDGYIVDDVNCTYFCGRNAYCNEECTKLKGESGYCQWASPYGNACYCYKLPDHVRTKGPGRCH : SCX1_ANDAU
SCX1_ANDAU   : KRDGYIVYPNNCVYHCVP..PCDGLCKKNGGSSGSCSFLVPSGLACWCKDLPDNVPIKDSRKCT : SCX9_BUTEU
SCX9_BUTEU   : ARDAYIAKPHNCVYECYNPSYCNDLCTENGAESGYCQILGKYGNACWCIQLPDNVPIRI.GKCH : A28854
A28854       : KKNGYAVDSSGKAPECLLSNYCNNQCTKVYADKGYCCLL.....SCYCFGLNDDVLEISRSYCD : SCXO_BUTOC
SCXO_BUTOC   : LKDGYIVDDRNCTYFCGTNAYCNEECVKLKGESGYCQWVGRYGNACWCYKLPDHVRTVQAGRCR : SCX1_MESMA
SCX1_MESMA   : VRDAYIAKPHNCVYECAR.EYCNDLCTKNGAKSGYCQWVGKYGNGCWCIELPDNVPIRV.GKCH : S62863
S62863       : KKDGYPVEADNCAFVCFGYAYCDKLCGDKKADSGYCYWVH...ILCYCYGLPD...NEPTGKC. : BMKIT2
BMKIT2       : .MDGYIRGSNGCKVSCLWGEGCNKECRAYGASYGYCWTWG...LACWCEGLPDD.K.TWENTCG : S62867
S62867       : GKEGYLMDHEGCKLSCFIRGYCGRECTLKKGSSGYCAWP.....ACYCYGLPNW.VKVWANKCG : SCX2_TITSE
SCX2_TITSE   : .KEGYAMDHEGCKFSCFIRGFCDGYCKTHKASSGYCAWP.....ACYCYGVPDH.IKVWANKC. : SCX5_LEIQU
SCX5_LEIQU   : LKDGYIVDDKNCTFFCGRNAYCNDECKKKGGESGYCQWASPYGNACWCYKLPDRVSIKEKGRCN : SCX3_LEIQU
SCX3_LEIQU   : VRDAYIAKNYNCVYECFR.SYCNDLCTKNGASSGYCQWAGKYGNACWCYALPDNVPIRV.GKCH : SCX8_MESMA
SCX8_MESMA   : GRDAYIADSENCTYFCGS.PYCNDVCTENGAKSGYCQWAGRYGNACYCIDLPASERIKE.GKCG : SCX2_CENNO
SCX2_CENNO   : .KEGYLVDNTGCKYECLKLDYCLRECKQGKGAGGYCYAF.....ACWCTHLYEQ.AIVWPKRCS : HSU33837
HSU33837     : PHDVHKCSEWSCSGRCISIKVCDLDCPENNTSTGYCSMTLCYGGACFCPPGYIINDSIWCQKCE : SCXA_BUTEU
SCXA_BUTEU   : VRDGYIADDKDCAYFCGRNAYCDEECKK.GAESGKCWYAGQYGNACWCYKLPDWVPIKQSGKCN : SCX1_ORTSC
SCX1_ORTSC   : ERDGYIVQLHNCVYHCGLNPYCNGLCTKNGATSGYCQWMTKWGNACYCYALPDKVPIKWDPKCY : SCXE_BUTEU
SCXE_BUTEU   : ARDAYIADDRNCVYTCALNPYCDSECKKNGADGSYCQWLGRFGNACWCKNLPDDVPIRKGEECR : SCX4_LEIQU
SCX4_LEIQU   : VRDAYIADDKNCVYTCGS.SYCNTECTKNGAESGYCQWLGKYGNACWCIKLPDKVPIRI.GKCR : SCX3_BUTOM
SCX3_BUTOM   : GRDGYIAQPENCVYHCFPGSGCDTLCKEKGATSGHCGFLPGSGVACWCDNLPNKVPIVVGEKCH : BOALPTOX
BOALPTOX     : VRDGYIAQPHNCAYHCLKISGCDTLCKENGATSGHCGHKSGHGSACWCKDLPDKVGIIVGEKCH : SCX3_ORTSC
SCX3_ORTSC   : VRDGYIAQPHNCVYHCFPGGGCDTLCKENGATQGSSCFILGRGTACWCKDLPDRVGVIVGEKCH : SCX5_CENSC
SCX5_CENSC   : KKDGYPVDSGNCKYECLKD.YCNDLCLERKADKGYCYWGK...VSCYCYGLPD...NSPTGKCN : SCXV_TITSE
SCXV_TITSE   : KKDGYPVEGDNCAFACFGYAYCDKLCKDKKADDGYCVWS....PDCYCYGLPEHILKEPTGRC. : C23727
C23727       : .KDGYPVDSKGCKLSCVANNYCDNQC.KMKASGGHCYAM.....SCYCEGLPEN.AKVSANIC. : SCX6_TITSE
SCX6_TITSE   : GREGYPADSKGCKITCFLTGYCNTECTLKKGSSGYCAWP.....ACYCYGLPES.VKIWENKC. : SCX2_BUTJU
SCX2_BUTJU   : NADGYIRKKDGCKVSCIIGEGCRKECVAHGGSFGYCWTWG...LACWCENLPDA.V.TWSNTCG : B23727
B23727       : .KEGYMVNSTGCSYSCPKTVYCDKECKKNGGSYGFCQYS.....NCWCEGLPES.TPTWDKPCD : SCX1_CENSC
SCX1_CENSC   : .KEGYLVKSDGCKYDCFWLEHCNTECKKNGGSYGYCYAF.....ACWCEGLPES.TPTYPKSC. : UN13_CAEEL

             : 1---------11--------21--------31--------41--------51--------61-- :
OrigSeq      : VKDGYIVDDVNCTYFCGRNAYCNEECTKLKGESGYCQWASPYGNACYCYKLPDHVRTKGPGRCH :OrigSeq
cons         : ------------EEEE------------------EEEEE-----EEEEE--------------- :cons
dsc          : -------------EEE------------------EEEEE-----EEEE---------------- :dsc
mul          : ----EEE-----EEEEE-------H----------EEEE------EEEE--------------- :mul
nnssp        : -------------EE------------------------------------------------- :nnssp
phd          : ----EEE-----EEEEE-----------------EEEEE-----EEEEEE-----EE------- :phd
pred         : ------------EEEE-------------------EEEE-------EEE--------------- :pred
zpred        : --EEEEE-------EEE-------HHH-------EEEE-------EEE---------------- :zpred


access       : EEEB-BBEEEEBBBBBBBEE-BEEEBEEEEEEEBBBBBBEE-BBBBBBEEBEEEBBB-BEEEBE : access

PHD Rel      : 9972465577616665256656422125798861366847999546765367963011445479 : PHD Rel
Pred Rel     : 0099790070906666899999777066799997706888999966655799908009999000 : Predator Rel


dssp         : -EEEEEE-----E-----HHHHHHHHHH----EEEEEEEE--EEEEEEEEE-----E------- :dssp
define       : ---EEEEE----EEEEEHHHHHHHHHHHHH-----EEEE---EEEEEEEE----EEEE-EEEEE :define
stride       : -EEEEEE-----E-E---HHHHHHHHHHH---EEEEEEEE--EEEEEEEEE-----E------- :stride


Q3 values for 1ptx-1-AS  View SS in Rasmol

	dssp	define	stride
phd	62.50	60.94	62.50
dsc	54.69	46.88	54.69
pred	53.12	48.44	53.12
mul	59.38	57.81	59.38
nnssp	42.19	34.38	42.19
zpred	64.06	53.12	64.06
cons	57.81	50.00	57.81