Results for 1pyp


1pyp         : TYTTRQIGAKNTLEYKVYIEKDGKPVSAFHDIPLYADKEDNIFNMVVEIPRWTNAKLEITKEETLNPIIQNTKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETKAVGDNNPIDVLQIGETIAYTGQVKEVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDIEDVEKYFPGLLRATDEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKETHNSWKQLIAGKSSDSKGIDLTNVTLPDTPTYSKAASDAIPPASPKADAPIDKSIDKWFF : STPPAG
STPPAG       : DLSPQRRAPRLNERILSSISRRSVAAHPWHDLEIGPEA.PSVFNVVIEISKGSKVKYELDKKT..........GLIKVDRILYSSVVYPQNYGFIPRTLCE............DNDPMDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDP...EYRHYTDIKQLPPHRLAEIRRFFEDYKKNENK...DVAVDDFLP.PNSAVNAIQYSMDLYAEYILHS..............LRK............................... : IPY2_YEAST
IPY2_YEAST   : QFSTIQQGSKYTLGFKKYLTLLGEVGSFFHDVPLDLNEHEKTVNMIVEVPRWTTGKFEISKELRFNPIVQDTNGKLRFVNNIFPYHGYIHNYGAIPQTWEDPTIEHKDVALKGDNDPLDCCEIGSDVLEMGSIKKVKVLGSLALIDDGELDWKVIVIDVNDPLSSKIDDLEKIEEYFPGILDTTREWFRKYKVPAGKPLNSFAFHEQYQNSNKTIQTIKKCHNSWKNLISGS.........LQEKYDNLPNTERAGNGVTLEDSVKPPSQIPPEVQKWYY : IPYR_SCHPO
IPYR_SCHPO   : EYTTREVGALNTLDYQVYVEKNGTPISSWHDIPLYANAEKTILNMVVEIPRWTQAKLEITKEATLNPIKQDTKGKLRFVRNCFPHHGYIWNYGAFPQTYEDPNVVHPETKAKGDSDPLDVCEIGEARGYTGQVKQVKVLGVMALLDEGETDWKVIVIDVNDPLAPKLNDIEDVERHMPGLIRATNEWFRIYKIPDGKPENSFAFSGECKNRKYAEEVVRECNEAWERLITGKTDAKSDFSLVNVSVTGSVANDPSVSSTIPPAQELAPAPVDPSVHKWFY : IPYR_BOVIN
IPYR_BOVIN   : SFSSEERAAPFTLEYRVFLKNEGQYISPFHDIPIYAD..KEVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHNDKHTGCCGDNDPIDVCEIGSKVCARGEIIRVKVLGILAMIDEGETDWKVIAINVEDPDAANYNDINDVKRLKPGYLEATVDWFRRYKVPDGKPENEFAFNAEFKDKNFAIDIIESTHDYWRALVTKKTDGKMNTTVSESPFQCDPDAAKAIVDALPPPCESACT.IPTDVDKWFH : CEC47E128
CEC47E128    : VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMATKEPFSPIKQDEKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPIDVIEVGSKVAGRGAVLQVKVLGTLALIDEGETDWKLVAIDVNDENADKLNDIDDVEKVYPGLLAASVEWFRNYKIPAGKPANEFAFNGEFKNREYAEKVIDETNEYWKTLIKEANPSLNTVSRVPEAVHQGTD.EAAATAIGATPEHGANAPLPGDVDKWHF : S62863

             : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------221-------231-------241-------251-------261-------271------- :
OrigSeq      : TYTTRQIGAKNTLEYKVYIEKDGKPVSAFHDIPLYADKEDNIFNMVVEIPRWTNAKLEITKEETLNPIIQNTKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETKAVGDNNPIDVLQIGETIAYTGQVKEVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDIEDVEKYFPGLLRATDEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKETHNSWKQLIAGKSSDSKGIDLTNVTLPDTPTYSKAASDAIPPASPKADAPIDKSIDKWFF :OrigSeq
cons         : --------------EEEEEE--------------------HHHEEEEEE-------EEH----------------EEEEEE------EEE-----------------------------EEEE---------EEEEHHH-EEEE-------EEEEEEE-----------HHHHHHH---HHHHHHHHHHH----------HHHHH------HHHHHHHHHHHHHHHHHHH---------EEE-------------------------------------- :cons
dsc          : --------------EEEEEE-------------------HHHHHEE---HHHHHHHEEHHHH-------------EEEEEE------EEE-------------------------------HH--------HHHHHHHHHHHHHHHH-----EEEEEE--------HHHHHHHHHH-------HHHHHHHH---------HHHHH--------HHHHHHHHHHHHHHH----------EEEEEE------------------------------------ :dsc
mul          : --------------EEEEE---------------------HHHHEEEH-------HHHHH--------------HHHHHH--------------------------------------EEEEE--H-----HHEHHHHH-HHHHHH------HEEEEE-------H---HHHHHH-----HH-----HH-----------HHHHHHH------HHHHHH------HH-EE-------------------------------------------------- :mul
nnssp        : --------------EEEEE-------------------------EEEE--------EEE----------------EEEE----------------------------------------EEE------------------EEEE--------EEEEEE-----------HHHHHHH---HHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHH---------EEE-------------------------------------- :nnssp
phd          : ------------EEEEEEEE----EE--------------EEEEEEEEE--------E----------------EEEEEEEE---EEEEE-----------------------------EEEE---------EEEEEEE-EEEE-------EEEEEEE-----------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH------HHHHHHHHHHHHHHHHHHH---------EEE---------HHHHH--------------------EE-- :phd
pred         : ----------HHHHHEEEEEE---------------HHHHHHHEEEEEE-----HHHHHHHH-------------EEEE---------------------------------------EEEE-----------EEEHHHHHHHHH------EEEEEEE------------HHHHH----HHHHHHHHEEEEE------------------HHHHHHHHHHHHHHHHHHHHH---------EEEEE----------------------------------- :pred
zpred        : -EEEE------EEEEEEEEE------EEEEEEE-HHHHHHHHHHEEEEHHHHHHHHHHHHHHH-----------EEEEEEEEE---EEEEEE---EEE------------------EEEEEEEHHHHHHHHHHHEEEHHHHEHEHHHHHHHHHHEEEEEE-----HHHHHHHHHE----HHEEHHHHHH-----------HHHHHHHH----HHHHHHHHHHHHHHHHE--------------------------------------------------- :zpred


access       : E-EEEEEBBE--BEB-BBBEEEEEBBBBB-EBBB-BEEEEEBBEBBBEBBE--EBEBEBBEE--BEEBEEE-EEEB-BBBBBBBB-BBBBBBBBBEEBBEE-E-E-EE-EBEEEEE-BEBB-BBEEBBBEE-B-EBEBBBBBBBBEEEEEEBEBBBBBBE-E-BEEBEEBEEBEEBBEEBBEBBBEBBEEBE-EEEEEE-EBBBEEEBEEEE-BBEBBEEB-EBBEEBBEEE-EEEE-BEBBEBEBEE-EE-EEBBBEBB-EEEEEBE-EBEEEB-E--E : access

PHD Rel      : 9863123442201246777416521102234423446541134667774253222210113556676432344437876421344145412334533324788687465656899852246652332234312455321125540379863589988528988631122356677422468999998753124788870244331345471357888887688887752024788788413212434774213433146877455888998821112218 : PHD Rel
Pred Rel     : 0077777877665500780089997678880876668887788669078997766777768088978866697665885560899786777799998089099088998888990997897756766666667677888546675099900669000889909988987758588876608888788588679999999687666777676667877988877889777678999899876667679099996666767900099999989999888000 : Predator Rel


dssp         : ---EEEE--------EEEEE----E-------------------E---------E----------------------E-----------------------------------------EEE-----------E--EEEEEEEEE----EEEEEEEE-------------HHHH------HHHHHHHHHHHHHHHH-----E-HHH--E-HHHHHHHHHHHHHHHHHHH--------------------------------------------------- :dssp
define       : ---EEEE-------EEEEEE----------EEEEE---------EEEEE----EEEEEEEE--------------EEEEE------EEEE--------------------------EEEEEEE-----------EEEEEEEEE--------EEEEEE--------------------------HHHHHHH------EEEEEEE--EEEEEHHHHHHHHHHHHHHHHHHHH-------------------------------EEEEEE------------- :define
stride       : ---EEEE--------EEEE-------------------------E---------E----------------------E-----------------------------------------EEE-----------E--EEEEEEEEE----EEEEEEEE------------HHHHHH----HHHHHHH-HHHHHH--------E------E-HHHHHHHHHHHHHHHHHHHH-------------------------------------------------- :stride


Q3 values for 1pyp  View SS in Rasmol

	dssp	define	stride
phd	74.64	71.07	75.71
dsc	69.29	65.36	69.64
pred	74.29	68.21	76.79
mul	71.43	63.93	72.86
nnssp	83.21	76.07	87.14
zpred	56.79	58.93	56.79
cons	79.29	76.07	81.07