Results for 1qbb-3-AUTO.1


1qbb-3-AUTO.1    : PRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYKLNKFHFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVIPEIDMPAHARAAVVSMEARYKKLHAAGKEQEANEFRLVDPTDTSNTTSVQFFNRQSYLNPCLDSSQRFVDKVIGEIAQMHKEAGQPIKTWHFGGDEAKNIRLGAGYTDKAKPEPGKGIIDQGNEDKPWAKSQVCQTMIKEGKVADMEHLPSYFGQEVSKLVKAHGIDRMQAWQDGLKDAESSKAFATSRVGVNFWDTLYWGGFDSVNDWANKGYEVVVSNPDYVYMDFPYEVNPDERGYYWGTRFSDERKVFSFAPDNMPQNAETSVDRDGNHFNAKSDKPWPGAYGLSAQLWSETQRTDPQMEYMIFPRALSVAERSWHRAGWEQDYRAGREYKGGETHFVDTQALEKDWLRFANILGQRELAKLDKGGVAYR : HEX1_CANAL
HEX1_CANAL       : PNFKHRGLMIDSGRNFLTVDSILEQIDIMALSKMNSLHWHLADSQSWPVALESYPHMIKDAYS..NDE.........V..........YSKNDLKYIVDYARARGVRVIPEIDMPGHARAG....WKQVDPTIVE....CADAFWT.D.......AAVEPPPGQ..LNIESEKTYEVISNVYNELSDIFID.....DVFHVGND......E...........................LQEKCYSAQLSP.NNTVTDLLKRYLKKALPIFNKVNHRKLTMWDDVLLS.DVSADKIPSNIT.....LQVWHEISGVKNLTSRGYDVVVSSSDFLYLDCGN......AG..WVTRYVETPENVDFNTQGGSWCGPYKSYQYNFDFTANLTTEKNHVLGREAALWSEQVDS.TVLTTKIWPRTAALAELTWSGNKDSNGHHRGYEFTQR.ILNFREYLVKLGYGVSPLVPKYCLLNPHACD..LYK : JC4732
JC4732           : PRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYKLNKFHFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVIPEIDMPAHARAAVVSMEARYKKLHAAGKEQEANEFRLVDPTDTSNTTSVQFFNRQSYLNPCLDSSQRFVDKVIGEIAQMHKEAGQPIKTWHFGGDEAKNIRLGAGYTDKAKPEPGKGIIDQSNEDKPWAKSQVCQTMIKEGKVADMEHLPSYFGQEVSKLVKAHGIDRMQAWQDGLKDAESSKAFATSRVGVNFWDTLYWGGFDSVNDWANKGYEVVVSNPDYVYMDFPYEVNPDERGYYWGTRFSDERKVFSFAPDNMPQNAETSVDRDGNHFNAKSDKPWPGAYGLSAQLWSETQRTDPQMEYMIFPRALSVAERSWHRAGWEQDYRAGREYKGGETHFVDTQALEKDWLRFANILGQRELAKLDKGGVAYR : HEXA_DICDI
HEXA_DICDI       : PRYPWRGFMVDSARHYIPKNMILHMIDSLGFSKFNTLHWHMVDAVAFPVESTTYPDLTKGAFSP.SAT....................FSHDDIQEVVAYAKTYGIRVIPEFDIPGHAAAWG....IGYPELVAT....CPDYAANVN........NIPLDISN....P...ATFTFIQNLFTEIAPLFID.....NYFHTGGDELVTCWL...........................EDPAIANWMTKMGFS.TTDAFQYFENNLDVTMKSINRT.KITWNDPID...YGVQLNPETLV......QVWSSGSDLQGIVNSGYKALVSFAWYLDKQNPDNNIHYEWQDTWQDYAADPTNNISTNANIIGGEATMWAEQ.INQVNWDVR.VWPRAIGIAERLWSAQSVN...SVSLALPRIGHFTCDLSRRGIQSGPLFPDYCPMQDDLVFTMKPNTKLSKSEIKLILNK.............. : CHB_VIBHA
CHB_VIBHA        : PRFDYRGVMVDVARNFHSKDAILATLDQMAAYKMNKLHLHLTDDEGWRLEIPGLPELTEVGANRCFDTQEKSCLLPQLGSGPDNFGGYFSKADYVEILKYAKARNIEVIPEIDMPAHARAAVVSMEARYDRLMEEGKEAEANEYRLMDPQDTSNVTTVQFYNKQSFINPCMESSTRFVDKVISEVAAMHQEAGAPLTTWHFGGDEAKNIKLGAGFQDVNAEDKVKGTIDLSKQDKPFAQSPQCQTLITDGTVSDFAHLPSHFAEEVSKIVAEKGIPNFQAWQDGLKYSDGEKAFATENTRVNFWDVLYWGGTSSVYEWSKKGYDVIVSNPDYVYMDMPYEVDPKERGYYWATRATDTRKMFGFAPENMPQNAETSVDRDGNGFTGKGEIEAKPFYGLSAQLWSETVRNDEQYEYMVFPRVLAAAQRAWHRADWENDYKVGVEYSQN.SNLVDKASLNQDYNRFANVLGQRELAKLEKSGIDYR : HEX_VIBVU
HEX_VIBVU        : PRLDYRGMHMDVSRNFHSKELVFRFLDQMAAYKMNKFHFHLADDEGWRLEINGLPELTQVGAHRCHDVEQNKCMMPQLGSGAPNNGGYYTREDYKEILAYASARNIQVIPSMDMPGHSLAAVKSMEARYRKFMAEGDVVKAEMYLLSDPNDTTQYYSIQHYQDN.TINPCMESSFVFMDKVIDEINKLHKEGGQPLTDYHIGADETAGAWG...........................DSPECRKMFVAPEVKNAKDINGYFINRISHILDAKGLT.LGAWNDGLSHKALDASSLAGNPPAWVWGTMFWGGVDQYNSFANKGYDVVVTPPDAYYFDMPYENDPEERGYYWATRFNDTKKVFSFMPENVPANVEWMTDRMGAKISATTGEKTHDFLGVQGALWSETIRTDAQVEYMVLPRMIAVAERGWHKASWEEEHKEGITYTSNVHLNDNIATRDADWAHFSNILGYKEMPKLDKAGITYR : HEXB_ALTSO
HEXB_ALTSO       : PRYDFRGLHVDVARNFRSKAFILQTIEQMAAYKLNKLHLHLADDEGWRLAIDGLDELTSVGAYRCFDLTETRCLLPQLGAGNNAQVGFYSAEDYIEILRYAKAHHIEVLPSLDMPGHSRAAIIAMEARYKKLMAQGKPEDAQKYRLVETADKTRYSSIQHYNDN.TLNVCIANTYTFIDKVLSEVKVLHDRAGVPLNTYHIGADETAVLWL...........................ESPACKKLQAS..VKDFTNFNGYFIERVAKLLDKKGIQ.VAGWSDGLG..DVRAANMPANIQSNGLGDIKRKRAPVAHRFANQGWQVVLSSPDVTYFDFPYQSHPEERGNHWASRAIESKKMFEFMPDNLPAHAEIWKNTNNHAYIANDSNKGVQFAGLQGHLWSEMLRSDAQAEYMLYPRLLALAERAWHHAEWELPYQAGRIYSQSSFTAKLQAQREADWQRFVAILG............... : BMKIT2

                 : 336-------346-------356-------366-------376-------386-------396-------406-------416-------426-------436-------446-------456-------466-------476-------486-------496-------506-------516-------526-------536-------546-------556-------566-------576-------586-------596-------606-------616-------626-------636-------646-------656-------666-------676-------686-------696-------706-------716-------726-------736-------746-------756-------766-------776-------786-------796-------806-------816 :
OrigSeq          : PRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYKLNKFHFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVIPEIDMPAHARAAVVSMEARYKKLHAAGKEQEANEFRLVDPTDTSNTTSVQFFNRQSYLNPCLDSSQRFVDKVIGEIAQMHKEAGQPIKTWHFGGDEAKNIRLGAGYTDKAKPEPGKGIIDQGNEDKPWAKSQVCQTMIKEGKVADMEHLPSYFGQEVSKLVKAHGIDRMQAWQDGLKDAESSKAFATSRVGVNFWDTLYWGGFDSVNDWANKGYEVVVSNPDYVYMDFPYEVNPDERGYYWGTRFSDERKVFSFAPDNMPQNAETSVDRDGNHFNAKSDKPWPGAYGLSAQLWSETQRTDPQMEYMIFPRALSVAERSWHRAGWEQDYRAGREYKGGETHFVDTQALEKDWLRFANILGQRELAKLDKGGVAYR :OrigSeq
cons             : -------EEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE------EEEE----HHH--------------------------------HHHHHHHHHHHHH--HEEE-------HHHHHHHHHHHHHHHHHH---------HEEE---------EEEE--------------HHHHHHHHHHHHHHHHH------EEE----HHHHHHH------------------------------HHHHHHH-------H---HHHHHHHHHHHHH-----HHHHHHHH---------------------EE-------HHHH----EEEEE----EEE-------------EEEE---------------------EEE--------------------HHHHHHHHH------HHHHHHHHHHHHHHHHHHH-----------EE----------HHHHHHHHHHHHHH-HHHHHHHHH------ :cons
dsc              : -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-----HHEEEE----HHHHH-------------------------------HHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHH---HHHHHHHEE---------EEEEE---------------HHHHHHHHHHHHHHHHH----EEEE----HHHHHHH----------------------------------HH----HHHHH------HHHHHHHHHH-----HHHHHHHHHHHHHHHHH-------EEEEEEE---------------EEEE-----EEEE------------HHHHH-----HHEEE--------HHHHHHH----------------------HHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH------ :dsc
mul              : -------EEEHHHH----HHHHHHHHHHHHHH-----HHHH------H-------HHHH----------------------------------H-HHHHHH----EEEE--------HHHHHHHHHHHH-HHHHH----HH-HHHH-----------EE----------------E-HHHHHHHHHHHHHH-----E---------HH------------------------------H----HHHHHH-------------HHHHHHHHHHH----HH---------HHHH-------------------------------EEEEE----EEEE--------------EHH-------E-------------------------------------HHHHHH-------EEEEE---HHHHHHH----------------------HHHHHHHH----HHHHH----HH------------ :mul
nnssp            : ---------HHHHH----HHHHHHHHHHHHH-----EEEEE----------------------------------------------------HHHHHHHHHH---EEE---------HHHHHHHHHHHHHHHHH--------EEEE---------EEEE--------------HHHHHHHHHHHHHHHHH--------------------------------------------------HHHHHHH-----------HHHHHHHHHHHHH-----HHHHHHHH-----------------------------HHHHH----EEEEE----------------------------------------------------------------------HHHHHHHH-----HHHHHHHHHHHHHHHHHHH------------------EE---HHHHH-HHHHHHHH-HHHHHHHHH----EE :nnssp
phd              : -------EEEE-HHHHHHHHHHHHHHHHHHHHHHHHEEEEEE-----EEEE----HHH--------------E-----------------HHHHHHHHHHHHH--EEEEEE----HHHHHHHHHHHHHHHHHHH------------E-----------EE-----------HHHHHHHHHHHHHHHHHHHH------EEE----HHHHHHHH----------------------------HHHHHHHH-------HHHHHHHHHHHHHHHHH----------------------------------EE-------HHHH----EEEEE----EEE-------------EEEE---------------------EEE--------------------HHHHHHHHH------EEEEE-HHHHHHHHHHHHH-----------EEE--------------HHHHHHHH--HHHHHHH-------- :phd
pred             : -----EEEEEEE------HHHHHHHHHHHHHHHHHHEEEEE------EEEE-----EEE-------------------------------HHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHH----HHHHHHHH----------EEEEE--------------HHHHHHHHHHHHHHHH-----EEEE-------------------------------------------EEEE--------------HHHHHHHHHHH-----EEE-------------------------EEE---------------EEEEE---EEEE-----------------------------------------------EEE----------HHHHHHHHHHH---HHHHHHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHHHHHHHHHHHHHH-------- :pred
zpred            : EEE--EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE-----HHHHHH-------------------------------HHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------EEEE-------------HHHHHHHHHHHHHHHHH-------EEEE---------------------------------------HHHHHEHE-----HHHH---HHHHHHHHHHHHH----EEEEH-------HHHH-----------------------------EEEEEEE--EEEEEE-------------EEE------EEEE--------HEEE-------------------EEE---HHHH--------EEEEEHHHHHHHHHHH----------------------HHHHHHHHHHHHEEEE----------------- :zpred


access           : EE-EBEBBBBEBB-EBBEEEBBBEBBEBBBBBEBBEBBBBBBEEEBBEBBBEEBEEBBEBBBEEB-EEEEB-BBBEEBEEE-EBBBBBBB-EEBBEBBEBBEB-BBEBBBEBEBEB-BEBBBBBBEB-BEEBBEEBEEEEBEEBBBBEEEEEEEBBBBEBB-EEBBBBBBBEEBBEBBBEBBBEBBEBBEEBEEEBBBBBBBEEEBBBBBBBBE-EEEBEEEEBEBBBEBBEEEEE-BEBEBBBEBBEEBEBEEBEEBBE-BBEEBBEBBEEEBBEEBBBBEEBBEEEEBEEBBBEEEBBBBBBBBBBBEEBEBB-EBBEEB-EBBBBBBEBBBBEBE-EB-EEE-BE-BBB-BEEEEEBBEBBBEEBEEEBEBBBE-EBEEBBBEEEEEBBEBBBBBBEBBEEEBEEEEEBBBBBBBEBBBBBE-BBEEBE-EEE-EEB-E-EEEEBBBBBEBBBEEE-B-BBBBBBBEEBBEBEEEBBE-E : access

PHD Rel          : 998862324521233102489999999999998524156542577735664298222135643336655551115554689776787531589999999999725487533169667788999999999999947973111111212189988753105224656777543246689999999999999973898422421762343445315746557999997442279888755552356742213553332245678888999998623763321113565454565223678862343212110344431144226964999189713322777899966534122100464222112768899643201134444522577877733334345554421377642125632368889998753023433565572232253221112110111333354223111344246896569 : PHD Rel
Pred Rel         : 007777866666677867880999999999990096788698977976086999988667887678788888779888999999898766986890009998988800079908777789999990999999986766799987760899999976889766988808879866687570787999999767999868857997776777569996799999999699788990997707778555566666660679906578899779766977655555977666676866579977786776666889885566699079009799907967899987999988866656677665568999998877555566998767778998999856588899885567787577706688979998850556777976666667999875587878796789788686999998660007000 : Predator Rel


dssp             : ----EEEEEEE-------HHHHHHHHHHHHH----EEEEEEEE--EE-E------HHHH---EE---------E----------EE--E-HHHHHHHHHHHHH---EEEEEEEE----HHHHHHHHHHHHHHHH---HHHHH--------------------HHH------HHHHHHHHHHHHHHHHHHHHH------EEEE------HHH---EEE--------EEE------------HHHHHHHH------HHHHHHHHHHHHHHHHHH----EEEEEHHHH-----HHH----EEEEEE-------HHHHHHHHHH---EEEE--HHHHE----------------------HHHHHH-----HHHHHH----------EEE---------EEEEEE-------HHHHHHHH--HHHHHHHHHH-------------EEE--------HHHHHHHHHHHHHHHHH-HHHHHHH------ :dssp
define           : ---EEEEEEEEE--EEEEHHHHHHHHHHHHHHHEEEEEEE-----EEEE-----HHHHHH----------------------EEEE---HHHHHHHHHHHHHHHEEEEEEEE-----HHHHHHHHHHHHHHHHHHHHHHHHHH---------EEEE--------EEEE--HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE------------------------EEEE----------HHHHHHHHHHHEEEE--HHHHHHHHHHHHHHHHHEEEEEEE----------------EEEEE--------HHHHHHHHH-----EEEE------------------------------------------------------------------------------------------------------------------------------------------------------------ :define
stride           : ----EEEEEEE-------HHHHHHHHHHHHHH---EEEEEEEE--EE-E-----HHHHHH--EE---------E----------EE--E-HHHHHHHHHHHHHH--EEEEEEEE----HHHHHHHHHHHHHHHHH--HHHHHH-------------------HHH------HHHHHHHHHHHHHHHHHHHHH------EEEE------HHH---EEE--------EEE------------HHHHHHHHH-----HHHHHHHHHHHHHHHHHHH---EEEEEHHH------HHH----EEEEEE-------HHHHHHHHHH---EEEE------E----------------------HHHHHH-----HHHHHH----------EEEE--------EEEEEE-------HHHHHHHH-HHHHHHHHHHH------------EEEE--------HHHHHHHHHHHHHHHHHHHHHHHHHH----- :stride


Q3 values for 1qbb-3-AUTO.1  View SS in Rasmol

	dssp	define	stride
phd	69.36	66.87	68.74
dsc	62.11	53.42	62.53
pred	68.12	64.18	68.12
mul	61.70	65.42	62.32
nnssp	70.39	63.35	69.57
zpred	64.39	65.22	65.22
cons	69.77	61.90	68.74