Results for 1r092


1r092        : GYSDRVQQITLGNSTITTQEAANAVVCYAEWPEYLPDVDASDVNKTSKPDTSVCRFYTLDSKTWTTGSKGWCWKLPDALKDMGVFGQNMFFHSLGRSGYTVHVQCNATKFHSGCLLVVVIPEHQLASHEGGNVSVKYTFTHPGERGIDLSSANEVGGPVKDVLYNMNGTLLGNLLIFPHQFINLRTNNTATIVIPYINSVPIDSMTRHNNVSLMVIPIAPLTVPTGATPSLPITVTIAPMCTEFSGIRSKSIVPQ : POLG_COXB5
POLG_COXB5   : GYSDRVRSITLGNSTITTQECANVVVGYGTWPTYLKDEEATAEDQPTQPDVATCRFYTLESVMWQQSSPGWWWKFPDALSNMGLFGQNMQYHYLGRAGYTVHVQCNASKFHQGCLLVVCVPEAEMGCATLNKPDQKSLSN.....NTFD..SQNTTAVQANVINAGMGVGVGNLTIFPHQWINLRTNNSATIVMPYINSVPMDNMFRHNNFTLMIIPFAPLSYSTGATTYVPITVTVAPMCAEYNGLR.LK...Q : POLG_POL32
POLG_POL32   : GYSDRVLQLTLGNSTITTQEAANSVVAYGRWPEFIRDDEANPVDQPTEPDVATSRFYTLDTVMWGKESRGWWWKLPDALRDMGLFGQNMYYHYLGRSGYTVHVQCNASKFHQGSLGVFAIPEFCLAGDSDTQRYTSYANANPGEKAQFNKDTAVTSEFCPVDYLLGCGVLIGNAFVFPHQIINLRTNNSATLVLPYVNALSIDSMVKHNNWGIAILPLSPLDFAQDSSVEIPITVTIAPMCSEFNGLR.NAPKLQ : POLG_HRV89
POLG_HRV89   : GYSDRLIQITRGDSTITSQDTANAVVAYGVWPSYLTPDDATAIDKPTQPDTSSNRFYTLDSRSWTSASSGWWWKLPDALKNMGIFGENMFYHFLGRSGYTIHVQCNSSKFHQGLLIVAAIPEHQLASATSGNVSVGYNHTHPGEQGREVVPSRTSSRPSDDSWLNFDGTLLGNLPIYPHQYINLRTNNSATLILPYVNAVPMDSMLRHNNWSLVIIPICPLQVQPGGTQSIPITVSISPMFSEFSGPRSKFSTTQ : A44048
A44048       : NLSDRVDSDKAGNSATNTQSSVGRLHGYGATHRGDHP..ASCADTATDKVLAAERYYTIDLATWTTAQTTIRVPLPLAGEHGGVFGATLRRHYLAKCGWRVQVQCNASQFHAGSLLVFLAPEFYTGTGVAQEPNKVFLMDTTWQE.....QAAPTGDG.KNGFFTLNHQNYWQWTVYPHQILNLRTNTSVDLEVPYVNVAPTSSWTQHANWALVVAVLTPLQYSTGAATDVAITVSLQPVNPVFNGLRHEVP.QS : APHNPCAP
APHNPCAP     : LLEDRILTTRNGHTTSTTQSSVGVTYGYATAEDFVS...GPNTSGLETRVVQAERFFKTHLFDWVTSDPFHLLELPT..DHKGVYGSLTDSYAYMRNGWDVEVTAVGNQFNGGCLLVAMVPELCS..........................IQK..............RELYQLTLFPHQFINPRTNMTAHITVPFVGVNRYDQYKVHKPWTLVVMVVAPLTVNNEGAPQIKVYANIAPTNVQVAGEFPS....G : CAU05876
CAU05876     : GYSDRVAQLTIGNSTITTQEAANIIIAYGEWPEYCKDADATAVDKPTRPDVSVNRFFTLDTKSWAKDSKGWYWKFPDVLTEVGVFGQNAQFHYLYRSGFCVHVQCNASKFHQGALLVAILPEYVLGTIAGENSHPPYVTTQPGQV........G..AVLTNPYVLDAGVPLSQLTVCPHQWINLRTNNCATIIVPYMNTVPFDSALNHCNFGLIVVPVVPLDFNAGATSEIPITVTIAPMCAEFAGLRQA....Q : HRVPP
HRVPP        : GYSDRIIQITRGDSTITSQDVANAVVGYGVWPHYLTPQDATAIDKPTQPDTSSNRFYTLDSKMWNSTSKGWWWKLPDALKDMGIFGENMFYHFLGRSGYTVHVQCNASKFHQGTLLVVMIPEHQLATVNKGNVNAGYKYTHPGEAGREVGTQVENEQPSDDNWLNFDGTLLGNLLIFPHQFINLRSNNSATLIVPYVNAVPMDSMVRHNNWSLVIIPVCQLQSN.NISNIVPITVSISPMCAEFSGAR..KTVVQ : S45041
S45041       : GYSDRVAQLTLGNSTITTQEAANIVVGYGRWPTSLRDTDATAVDKPTQPGVSAERFYTLPSVQWTNSFKGHYWKLPDALSELGLFGQNLQFHYLYRGGWVIHVQCNATKFHQGTLLVVATPEHKIQSA....ESPAFARTNPGEQ........G..AAYQFPFTFEDGTALGNALIYPHQWVNLRTNNSATLVLPYVNALPMDSGIRHNNWTLSVIPIVPLEYAAGATTYVPITVTIAPMCTEYNGLRAA....Q : POLG_COXA2
POLG_COXA2   : GYSDRVRQITLGNSTITTQEAANAIVAYGEWPTYINDSEANPVDAPTEPDVSSNRFYTLESVSWKTTSRGWWWKLPDCLKDMGMFGQNMYYHYLGRSGYTIHVQCNASKFHQGALGVFLIPEFVMACNTEKTSYVSYINANPGERNTYNPSNTDVSQFAALDYLLGSGVLAGNAFVYPHQIINLRTNNSATIVVPYVNSLVIDCMAKHNNWGIVILPLAPLAFAATSSPQVPITVTIAPMCTEFNGLR.NIPVHQ : HRU60874
HRU60874     : GYSDRVQQITLGNSTITTQEARNAIVCYAEWPEYLSDNDASDVNKTSKPDISVCRFYTLDSKTWKATSKGWCWKLPDALKDMGVFGQNMFYHSLGRTGYTIHVQCNATKFHSGCLLVVVIPEHQLASHEGGTVSVKYKYTHPGDRGIDLDTVEVAGGPTSDAIYNMDGTLLGNLLIFPHQFINMRTNNTATIVVPYINSVPIDSMTRHNNVSLMVVPIAPLNAPTGSSPTLPVTVTIAPMCTEFTGIRSRSIVPQ : EMCDIAB
EMCDIAB      : NLSDRVLQDTAGNTVTNTQSTVGRLVGYGAVHDGEHP..ASCADTASEKILAVERYYTFKVNDWTSTQKPIRIPLPLSGEDGGVFGAALRRHYLVKTGWPVQVQCNASQFHAGSLLVFMAPEYPT........LDAFAMDNRWSK.....DNLPNGQTNRKGPFAMDHQNFWQWTLYPHQFLNLRTNTTVDLEVPYVNIAPTSSWTQHASWTLVIAVVAPLTYSTGASTSLDITASIQPVRPVFNGLRHESR.QS : ERPROTYP11
ERPROTYP11   : NIEDRIETTVVGVTIINSQGSVGTTYCYSRPDSKAP...STVSDPVTRLGPTLSRHYTFKVGEWPHSQSHWICPLPDKLKKMGSFHEVVKSHHLVKNGWDVVVQVNASFAHSGALCVAAVPEYKHTHEK............................ALKWSELEEPAYTYQQLSVFPHQLLNLRTNSSVHLVMPYIGPGPTTNLTLHNPWTIVILILSELTGP.GQT..VPVTMSVAPIDAMVNGPLPN....A : JS0198
JS0198       : HLEDRILTTRHNTTTSTTQSSVGVTYGYASADRFLP...GPNTSGLESRVEQAERFFKEKLFTWTASQEFHLLELPT..DHKGIYGAMVESHAYVRNGWDVQVSATSTQFNGGTLLVAMVPELHS..........................LDK..............RDVSQLTLFPHQYINPRTNTTAHIVVPYVGVNRHDQVQMHKAWTLVVEVMAPLTTSNMGQDNVEVYANIAPTNVYRAGERPS....G : ERPROTYP2
ERPROTYP2    : RQPDRIVTVLDGNTSRTTQSSVGILRGYNYAPGKHTQ.PSSAQDTPSKAEQSVERGFTFQLAQWETSRNILTIPLPGLIKVSGMYKAFIETHAYIKNGWKIQVQCNASQFHSGCLLVAMIPEYLSTAQQD.SWRDKTTDSTPG.............WVWNTYEAFPPGFPPQQITLFPHQFLNLRTNTTVDLEVPYTNFAPSSSPTLHCPWTLVIVVVSPLQFGTGAPTQVQITTTITPTDFVANGLRQA....Q : CXACAPR
CXACAPR      : GYSDRVAQLTVGNSTITTQEAANIIVSYAEWPEYCPDTEPTAVDKPTRPDVSVNRFYTMPATLWETESKGWYWKFPDLLNEIGVFGQNAQYHYLYRSGFCIHVQCNASKFHQGALLVAVIPEFVVAEQDATAKHPALEATQPGKK........G..RAFRHPYVLDCGVPLSQALVFPHQWINLRTNNCATIVVPYINALPFDSAINHSNFSLAVVPVCPLKYNTGATPSIPITITVAPLCSEFAGLRQA....Q : POLG_HUEV7
POLG_HUEV7   : GYSDRVLQLKLGNSSIVTQEAANICCAYGEWPTYLPDNEAVAIDKPTQPETSTDRFYTLKSKKWESNSTGWWWKLPDALNQIGMFGQNVQYHYLYRSGFLCHVQCNATKFHQGTLLIVAIPEHQIGKKG.TGTSASFAEVMKGAE........G..GVFEQPYLLDDGTSLACALVYPHQWINLRTNNSATIVLPWMNSAPMDFALRHNNWTLAVIPVCPLAGGTGNTTYVPITISIAPMCAEYNGLRNA....Q : POLG_BOVEV
POLG_BOVEV   : GYSDRVAQLTLGNSTITTQEAANICVAYGCWPAKLSDTDATSVDKPTEPGVSADAFYTLRSKPWQADSKGWYWKLPDALNNTGMFGQNAQFHYIYRGGWAVHVQCNATKFHQGTLLVLAIPEHQIATQ....EQPAFDRTMPGSE........G..GTFQEPFWLEDGTSLGNSLIYPHQWINLRTNNSATLILPYVNAIPMDSAIRHSNWTLAIIPVAPLKYAAETTPLVPITVTIAPMETEYNGLRRASN..Q : SCX4_LEIQU

             : 8---------18--------28--------38--------48--------58--------68--------78--------88--------98--------108-------118-------128-------138-------148-------158-------168-------178-------188-------198-------208-------218-------228-------238-------248-------258-- :
OrigSeq      : GYSDRVQQITLGNSTITTQEAANAVVCYAEWPEYLPDVDASDVNKTSKPDTSVCRFYTLDSKTWTTGSKGWCWKLPDALKDMGVFGQNMFFHSLGRSGYTVHVQCNATKFHSGCLLVVVIPEHQLASHEGGNVSVKYTFTHPGERGIDLSSANEVGGPVKDVLYNMNGTLLGNLLIFPHQFINLRTNNTATIVIPYINSVPIDSMTRHNNVSLMVIPIAPLTVPTGATPSLPITVTIAPMCTEFSGIRSKSIVPQ :OrigSeq
cons         : -----EEEEE----------EEEEEEE---------------------------EEEEE-----------EEEE---HHHHH-------EEEEEE----EEEEEE--------EEEEEEE--------------EEEEE-----------------------EE---------EEE----EEEE-----EEEEEEE---------------EEEEEEE-----------EEEEEEEE------------------ :cons
dsc          : ------EEEEE-------HHHHHEEEE---------------------------HHEEE-----------EEEE---HHHHH--------EEEE-----EEEEEE--------EEEEEE------------EEEEEEEE-----------EEE---------------------------EEEE------EEEEEE---------------EEEEEEE------------EEEEEEE------------------ :dsc
mul          : ------EEE-------E------EEEEE----------------------------EEE-------------------------------EEEE-----EEEEE----------HEEEHHH--HH--------------------------------------------------E----EE--------EEEEEEE-------H-------EEEEEEE-----------EEEEEEE---EE------------- :mul
nnssp        : -----EEEEE----EEE------EEEE----------------------------EEEE-----------EEEE---------------EEEEEE----EEEEEE--------EEEEEEE--------------EEEEE-----------------------EE----------EE----EEE------EEEEE-----------------EEEEEEE-----------EEEEEEEE------------------ :nnssp
phd          : -----EEEEE----------EEEEEEEEE----------------------EEEEEEEEEEE--------EEEE--HHHHHH-----EEEEEEEE---EEEEEEE--------EEEEEEE---------------EEEEE---------------------EEEE------EEEEE---EEEEE-----EEEEEEEE-------------EEEEEEEE-----------EEEEEEEEE---HHH----------- :phd
pred         : -----EEEEE------------EEEEE---------------------------EEEE--------------------------------EEEE-----EEEEE---------EEEEEEE---------------EEE-----------------------------------EEE----EEEE------EEEEEE---------------EEEEEEE------------EEEEEEE------------------ :pred
zpred        : ---EEEEEE------EEEEEEEEEEEEE----------------------EEEEEEEE--------------EE-------EEEHHHHHEEEE-----EEEEEEE-------EEEEEEEEHHHH------------------------------------------------EEEEEEEEEEEE-----EEEEEEEEEE---EEE------EEEEEEEEEEE-------EEEEEEEEEEEEE------------- :zpred


access       : E-EEEBBEBEBEEE-B-BEEBBBBBBBBB-B-E-BEEEEBEBEEEEEEEE-BBB-BBEBEBEEBEEE-EEBBBEB-EBBEEBBBBB-BBBBBBBBEEBB-BBBBBEBBEB-BBBBBBBBBBEBBBBEEEEEE--BBBB-E-EEEE--E--EB-EBEEBBE-BBBB-EB-BBBEBBBBB-BBBEB-EE-BBBBBBBBBBBBBBE-BB--B-BBBBBBBBBEBEB-EE--EEBEBBBBBBBBBB-BEE--EE-E-EE : access

PHD Rel      : 998634677516641112212357776522433357875355688998872342466533111134686236624312565111111123445632312688861654224325888862311223557887531255417776676666545566422211220464311147751324774123893688875322334521343576178988732344578997426788874133112046446766888 : PHD Rel
Pred Rel     : 007767799609996655566666886689997899999887889999908565567666666679999876678896777608666677586778997990006776666770909900886655678898777777789999986677899999887777667778755667807906676078997559000777099998667876758000066877789998777700700789885586756656000 : Predator Rel


dssp         : ------EEEEE--EEEEE------EEHHH-------HHH-------E--HHH----EE---EEEE-----EEEEE-HHH---HHHHHHHHHEEEEEEEEEEEEE-------EEEEEEEEEE-----E---------HHHH--HHH-EE---------E---HHH----E-HHHHHH--EEEEE-----EEEEEE--------E----E--EEEEEEEEEEEE-------EEEEEEEEEEEEEEEEEE-------- :dssp
define       : ------EEEEE---EEEEEE--EEEE--EEEE------EEEE-EEEEEE-----EEEEEEEEEE------EEEEEHHHHH--HHHHHHHHHH------EEEEEEEE----EEEEEEEEEEE-EEEE-----EEEEHHHHHH--------------------------------------EEEE-----EEEEEEEE------------EEEEEEEEE--EEEE------EEEEEEEEEEEEEEEE--EEEEEEEE :define
stride       : ------EEEEE--EEEEE------EEHHH-------HHH-------E--HHH----EEEEEEEEE-----EEEEE-HHH---HHHHHHHHHEEEEEEEEEEEEE-------EEEEEEEEEE-----E---------HHHH------EE---------E---HHH----E-HHHHHH--EEEEE-----EEEEEE--------E----E--EEEEEEEEEEEE-------EEEEEEEEEEEEEEEEEE-------- :stride


Q3 values for 1r092  View SS in Rasmol

	dssp	define	stride
phd	62.75	60.78	65.10
dsc	58.43	61.96	59.22
pred	61.96	59.22	61.96
mul	61.18	56.86	61.96
nnssp	66.67	61.96	67.45
zpred	63.92	60.78	63.92
cons	62.35	61.18	63.14