Results for 1rec-1-DOMAK


1rec-1-DOMAK    : LSKEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFGTLDFKEYVIALHMTSAG : ACU61222
ACU61222        : LKPEEVEELKQQTYFTEAEIKQWHKGFRKDCPDGKLTLEGFTKIYQQFFPFGDPSKFANFVFNVFDFISFGEFLQALSVTSRG : GCA2_BOVIN
GCA2_BOVIN      : FSWEEAEENGAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVP.DNEEATQYVEAMFRAFDTIDFLEYVAALNLVLRG : ACU61223
ACU61223        : LKPEVLEDLRHQTQFSEEELQEWYKGSLKDCPSGHLSVEEFKKIYGNFFPYGDASRFAEHVFRTFDSIDFREFICALSVTSRG : RECO_HUMAN
RECO_HUMAN      : LSKEILEELQLNTKFSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDTLDFKEYVIALHMTTAG : NECB_BOVIN
NECB_BOVIN      : LAPEVLEDLVQNTEFYEQELKQLYKGFLKDGPAGILNLEEFQQLYIKFFPYGDAXKFAQHAFRTFDTIDFLEFIQALSVTDRG : GCAP_BOVIN
GCAP_BOVIN      : ...GNIMDGKSVEELSSTECHQWYKKFMTECPSGQLTLYEFRQFFGLKNLSPWASQYVEQMFETFDYIDFMEYVAALSLVLKG : CEC54E101
CEC54E101       : VQPPSLEQLTQRTQFSPKWIKYMYAKFKNESPTGKMKEEEFRNLLASIIPEKATDQYISRLFTAFATITFENLLDSLSHVQPQ : CELC16H33
CELC16H33       : QTPPSIDYLIEITNFSKREIQQLYRSFKELWPIGTVDLEQFQLIYASIFPNGDSKGYAELVFKNID......FITNYSKIAKG : CALB_NAEGR
CALB_NAEGR      : LRPEEVEEMQKGTNFTQKEIKKLYKRFKKLDKDGNGTIS...KDEFLMIPELAVNPLVKRVISIFDSVNFKEFIAALSVFNAG : VISI_CHICK
VISI_CHICK      : LSREVLQELRASTRYTEEELSRWYEGFQRQCPDGRIRCDEFERIYGNFFPNSEPQGYARHVFRSFDTLDFREYIIALHLTSSG : NCS2_CAEEL
NCS2_CAEEL      : LSKEDLEFLKKNTNFTEEQIKEWYKGFVQDCPKGHLTKEQFIKVYKDFFPSGSAEGFCEHVFRTFDFIDFKEFLLAINVTSSG : FREQ_DROME
FREQ_DROME      : LKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPQGDPSKFASLVFRVFDSIEFEEFIRALSVTSKG : NCS1_CAEEL
NCS1_CAEEL      : LKSSQIRDLAEQTYFTEKEIKQWYKGFVRDCPNGMLTEAGFQKIYKQFFPQGDPSDFASFVFKVFDAIEFHEFIRALSITSRG : NCS1_SCHPO
NCS1_SCHPO      : LSQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDYIDFKEFICALSVTSRG : S61168
S61168          : LSKDDLTCLKQSTYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDFIHFEEFITVLSTTSRG : POLG_HUEV7

                : 9---------19--------29--------39--------49--------59--------69--------84--------94- :
OrigSeq         : LSKEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFGTLDFKEYVIALHMTSAG :OrigSeq
cons            : --HHHHHHHHHH----HHHHHHHHHHHH---------HHHHHHHHHH-------HHHHHHHHHHH----HHHHHHHHHH---- :cons
dsc             : ---HHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHH-------HHHHHHHHHHHH--HHHHHHHHHHH---- :dsc
mul             : --HHHHHHHHH----HHHHHHHHHHHHHH-------HHHHHHHHH--H--------HHHHHHHHHHHHHHHHHHHHH------ :mul
nnssp           : --HHHHHHHHHH----HHHHHHHHHHHHH--------HHHHHHHHHHH------HHHHHHHHHHH----HHHHHHHHHH---- :nnssp
phd             : --HHHHHHHH------HHHHHHHHHHHH---------HHHHHHHHHH-------HHHHHHHHHH-----HHHHHHEEEE---- :phd
pred            : ---HHHHHHHHH-HHHHHHHHHHHHHHHH-------HHHHHHHHHHH-------HHHHHHHHHH----HHHHHHHHHHH---- :pred
zpred           : ---HHHHHHHH---HHHHHHHHHH----------HHHHHHHHH------------HHHHHEEHHHH---HHHHHHHHHH---- :zpred

access          : EEEE-BEEBEEEEE-EEEEBEEBBEEB-EEBEEEEB-EEEBEEBBEEBBEEEEEEEBBEBBBEBBEBBEBEEBBBBBEBEEEE : access

PHD Rel         : 88258998613564218999999987523698876526899998763368888157999988632642258974112121599 : PHD Rel
Pred Rel        : 00777799985505557999900977766009909568796999775799990778788777756085599999097777000 : Predator Rel

dssp            : -HHHHHHHHHHH----HHHHHHHHHHHHHH----EEEHHHHHHHHHHH------HHHHHHHHHH--EEEHHHHHHHHHHHH-- :dssp
define          : HHHHHHHHHH-----HHHHHHHHHHHHHHHH-----HHHHHHHHHH-------HHHHHHHHHHHH---HHHHHHHHHHHHH-- :define
stride          : HHHHHHHHH-------HHHHHHHHHHHHHH----EEEHHHHHHHHHHH-----HHHHHHHHHHHH-EEEHHHHHHHHHHHH-- :stride

Q3 values for 1rec-1-DOMAK  View SS in Rasmol

	dssp	define	stride
phd	78.31	79.52	75.90
dsc	77.11	80.72	72.29
pred	81.93	83.13	74.70
mul	75.90	79.52	73.49
nnssp	86.75	83.13	81.93
zpred	65.06	69.88	62.65
cons	84.34	83.13	79.52