Results for 1rhd


1rhd         : VHQVLYRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYNGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMDFLTENGFEKSPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQGKG : MTCY7122
MTCY7122     : SAYAHPERLVTADWLSAHMGAPGLAIVESDEDVLLYDVG...........HIPGAVKIDWHTDLN..DPRVRDYINGEQFAELMDRKGIARDDTVVIYGDKS..NWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDPTKTCTGYPVVQRDAPIRAFRDDVLAILG..AQPLIDVRSTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDFINPD..DQTVVYCRIGERSSHTWFVLHLLGKADVRNYDGSWTEWGNAVRVPIVAGEEPG : D50564
D50564       : AAPQLFRALVSAQWVAEALKSPRASQPLKLLDASWYLPKLRDARREFEERHIPGAAFFDIDRCSDHTSPYDHMLPSATHFADYAGSLGVSAATHVVIYDGSDQGLYSAPRVWWMFRAFGHHSVSLLDGGFRYWLSQNLPISSGKSPSEPAEFCAQLDPSFIKTHEDILENLDARRFQVVDARAAGRFQGTQPEPR.DGIEPGHIPGSVNIPFTEFLTSEGLEKSPEEIQRLFQEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKPDVPVYDGSWVEWYMRAQPEHVISQGRG : THTR_CRIGR
THTR_CRIGR   : VHQVLYRALVSTKWLAESIRSGSLGPGLRVLDASWYSPGTRQARKEYQERHVPGASFFDIEECRDTTSPYEMMLPSEAHFADYVGSLGISNDTHVVVYDGDNLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAVFKATLDRSLLKTYEQVLENLQSKRFQLVDSRAQGRYLGTEPEPDIVGLDSGHIRGSANMPFMNFLTEDGFEKSPEELRAIFQDKKVDLSQPLIATCRKGVTACHIALAAYLCGKPDVAVYDGSWSEWFHQAPPETRVSQGKS : JX0320
JX0320       : ................................................MDIFPAQCFLISKRFLDHTSPLPHMLPRPETFAVAMLELGVNQDKHLIVYDEGN..LFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGVELPEGEFNAAFNPEAVVKVTDVLLASHE..TAQIIDARPAARFNAEVDEPR.PGLRRGHIPGALNVPWTELVRE.GELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPVK... : D908196
D908196      : APVALYGNDKDVDAVKTRLQKAGLTHISILFEQLVYPQWLDLQQPKLYLIHIPGADYIDTNEWES..EPLWNKVSD.EQLKAMLAKHGIRHDTTVILYGRDV..YA.AARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGKVKAEPDFGVKIPQPQLMLDMEQARGLLH.QDASLVSIRSIGTTSGYSYIPKGAGARWGHAGSDS.THMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGERGP : CED20234
CED20234     : SVNTLLKKGIINKEGVRIIDCSFAVAPRPDFEQEGYGDFKLMAERNLYLAHIPEAVHVDLDIATYPSRYQRFQQYRADLFEEYAQMVGLNNKEHFIFYGKGAFGMLFASKVAWIFKSYGHENISLVDGGFDSWKRNGFEVSTEVKLPAGNFKAEDNKKYVITFQELEAKKDGTSEINFLDSRIRGQFDGTQETLDPHLVNGTRIAGFKNLPSAELLVKGGNLKSEEEIKSWLTQNGYVENQPTITSCNAGIQAALLAYVIAVKPSQNPRVYNGSLKEMELRAPKKISEGPQHL : S67148
S67148       : ...MPLFDLISPKAFVKLVASEKVHRIVP.VDATWYLPSWLDNKVDFLTKRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAMSNLGVQKDDILVVYDRVG..NFSSPRCAWTLGVMGHPKVYLLNN.FNQYREFKYPLDSSSPYPKSHYESSESQDKEIVDYEEMFQLVKAKKFNAFDARSLGRFEGTEPEPR.SDIPSGHIPGTQPLPYGSLLDPEAGEAIHATLEKALKDFHCTLDKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSGPEWIAENRD. : THTR_CHICK
THTR_CHICK   : AAQALGRALVSAKWLSEAVRAGRVGAGLRVLDASWYPPEERDARQEFKERHIPGASFFNIEECRDKSSPYDFMLPSEAHFADYVGRLGVSNDTHVVVYDGDELGTFYAPRAWWMFRAFGHREVSVLNGGFKNWVKEGHPVTAEPSQPAEAVFKAKLDKTLLKTFEQAMENVGSKKFQVVDSRPAGRFQGTELD...QGLESGHIPGAVNMPFSTFLTESGHEKSIEEIQQMFREKKVDLSKPLTATCRKGVTACHIALAAYLCGKPDVAVYDGSWSEWFHRAPPQYKVTELK. : CGU35023
CGU35023     : ..............................................................................AFAELMNRKGIARDDTVVVYGDKS..NWWAAFTLWVFELFGHSDVRLLNGGRDAWMAEERDTSYVPEYPSANYPVVERDENQRAFVAEVLGSLTSGGMTLVDVRTSGLDEHGNPTSNTGVLRGGHIPGAINLDWSDAVLPNGNFRTRAELDKLYADLNPA..DDTVVYCQVGDRAAHTWFVLYLLGFNNVRNYDGSWAEWGNMVRMPIETGENTK : THTR_SACER
THTR_SACER   : ..MSREEVLVSTDWAEQNLNTDGVVFAEVDEDTTAYDGG...........HIPGAIKLDWKNELQ..DHVRRDFVNREGFEKLLSAKGIGNDDTVILYGGNN..NWFAAYAYWYFKLYGHSDVKLLDGGRKKWELDGRELTKEPNRAATAYKAQEPDASIRAFRDEVVDAIG..NKNLVDVRSAGKLLAPAHLPQESAQRAGHIPSAINVPWSKAANEDGTFKSDEELKQVYGEAGLDTDKDTIAYCRIGERSSHTWFVLELLGHTNVKNYDGSWTEYGSLVGVPIENPQEQG : MLU1518217
MLU1518217   : ..MARSDVLVSADWAESNLDSANIVFVEVDEDTSTYDGD...........HIAGAIKLDWRADLQ..DPIKRDFIDTQQFSKLLGDRGISNDNTVILYGGNN..NWFAAYAYWYFKLYRHDKVKLLDGGRKKWELDGRPLSTDVTRPATSYAAAAPDNTIRAFRDEVIASIK..IKNLVDVRSSGKLLAPAHLPQEQSQRPGHIPSAINIPWSKAANEDGTFKSDEQLAKLYADAGLDRLKETIVYCRIGERSSHTWFVLELLGYQNVKNYDGSWTEYGSLVGVPIELGS... : MTCY33918
MTCY33918    : .MQARGQVLITAAELAGMIQAGDPVSILDVDGHAAYLQG...........HLPGAVFVSLEDELSDAGRGRHPLPSGASLQATVRRCGIRHDVPVVVYDDWN..RAGSARAWWVLTAAGIANVRILDGGLPAWRSAGGSIETGQVSPQLGNVTVLHDLYAGQRLTLTAQQAGAGGVTLLDARVPERFRGDVEP...VDAVAGHIPGAINVPSGSVLADDGTFLGNGALNALLSDHGIDHGGRVGVYCGSGVSAAVIVAALAVIG.QDAELFPGSWSEWSSDPTRPVGRGTA.. : THTR_SYNP7
THTR_SYNP7   : ISLVVAVLLAVPGWLTPATAASQATVQFVALNNKQLKILDRTNPLAYIEGHLPGAVNIADAAYRGPNGFLPVQIWDPEKLASLFGRAGVSNNDTVLVYSDGND.VLGATLVAYLLERSGVQNIAVLDGGYKGYKDAGLPVTKEYPRYQAARFAPKDNRAFRVDIKQVEQLTG..KSTFVDPRPPALFSGEQQ....VFIRNGHIPGARNIPWPTFTEANHKLKPLSELKAILEAKGVTPDKDVIVTCSTGREASLQYLVLHLLKYPKVRIYEGSWTEYSASN.LPVETGPDRV : THTR_AZOVI
THTR_AZOVI   : DDFASLPLVIEPADLQARLSAPELILVDLT.SAARYAEG...........HIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVYDDEG..GGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELPAPAGGPVALSLDEPT.ASRDYLLGRLGAADLAIWDARSPQEYRGEKVL....AAKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVEL..... : S61168

             : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------221-------231-------241-------251-------261-------271-------281-------291 :
OrigSeq      : VHQVLYRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYNGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMDFLTENGFEKSPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQGKG :OrigSeq
cons         : ---HHHHHHH-HHHHHHHHH------EEE-----------HHHHHHHHH-------E-------------------HHHHHHHHHH-------EEEEE--------HHHHHHHHHHH----EEEEE-------------------------------HHHHHHHHHHHHHH-----EEEE--------------------------------------------HHHHHHHHHH--------EEEEE-----HHHHHHHHHHH------------------------------ :cons
dsc          : ---HHHHHHHHHHHHHHHHHH-----EE------------HHHHHHHHH---------HHHH---------------HHHHHHHHH-------EEEEE---------HHHHHEEE--------EE-----EEEE-----------------EE----HHHHHHHHHHHHHH-----EEEE--------------------------------HHHHH----HHHHHHHHHHHHH---------EEE--------EEEEEE--------------------------------- :dsc
mul          : ---H-HHHHHH---HHHH--------EEE-H-------------------------E-H-------------------HHHHHHHH-------EEEEE---------H-H-HHHHH------EEE--------------------------HHHH----HHHHHHHHHHHH-----EEE-----------------------------------HH------H-HHHHHHHHHHH-------EEEEE-------HHHHHHHHH-----E------------------------ :mul
nnssp        : HHHHHHHHHH-HHHHHHHHH--------------------HHHHHHHHH-------EE------------------HHHHHHHHHH-------EEEEE-----------HHHHHHHH-----EEEE-------------------------------HHHHHHHHHHHHHH----EEEE---------------------------------------------HHHHHHHHHH--------EEEE------HHHHHHHHHHH------------------------------ :nnssp
phd          : ---EE---EE--HHHHHHH------EEEE---------------HHHHHHH-----E-------------------HHHHHHHHHH-------EEEEEE-----HHHHHHHHHHHHHH---EEEEE----------------------------------HHHHHHHHHHH-----EEEE--------------------------------------------HHHHHHHHHH--------EEEEEE---HHHHHHHHHHHH-------------EEE-------------- :phd
pred         : ---HHHHHHHHHHHHHHHHHH------EEE----------HHHHHHHHH------EEE-------------------HHHHHHHHH-------EEEEE--------HHHHHHHHHHH----EEEEE--------------------------------HHHHHHHHHHHHH-----EEE---------------------------------------------HHHHHHHHHH--------EEEEE-----HHHHHHHHHHH----EEE----------------------- :pred
zpred        : ----HH-------HHHH---------EE-------------------------------------------------HHHHHHHHHH-----EEEEEEE--------EHHHHHHEE-----EEEEE-----EEE----------------HHHHHHHHHHHHHHHHHHHHH----EEEEEEE--------------------EEEEE-----EHHH------HHHHHHHHHHHHH------EEEEEEE---EEEHHHHHHHH----EEEEE-----EE--------------- :zpred


access       : EEEBBBEBBBBBE-BBEBBEBEEBBBBBBB-EBEB--EE--EBEEEBBEE-BEBBBBBEBEEB-EEEEE-E--B-EEE-BBEBBBE--BEEE-BBBBB--E--E-BBBB-BBBBB-BBE---BBBBEEE-E-B-EEE-EBEEEEEEEEEE-BBBE-EEEBBEBBEEBBEEBEEEEBEBBEB-BEEE-EEEEE-EEE-BB-BE-BEBBBEBEBBEBBEEEEE-EB-EEBEEBBEE-E-E-EEEBBBBB-EE-EBBBBBBBBBBBEEEEBEB-EE--BEBB-EBE-EBE-EEEEE : access

PHD Rel      : 98311222111214688742588515552133433466763221355653124651203344368888765456653778999852577998458887248772367899999988617872788558743211268765666677754443225773312446788985268862475224566555677678653345455676446664433466788654589999987348789986278862552145656778874678753137863212147888642345899 : PHD Rel
Pred Rel     : 00777777864589899987688879866760567099875667888776999987776567789999800007877688889986699899890009899987665888877777869887899099967555579877778999998866567877678889999878567767677687776668889999977778999000077898876699996687899999999666888998899878886655787000886899858779996666557899977677000 : Predator Rel


dssp         : --------EE-HHHHHHHHHH--E---EEEEE----------HHHHH---E----EE-------------------HHHHHHHHHHH------EEEE----------HHHHHHHHHH-----EEEE--HHHHHHHH----E-------------------EE---HHHHHHHH---EEEE---HHHHH--------------E----EE------E-----E--HHHHHHHHHH--------EEEE-------HHHHHHHHHH-----EEE---HHHHHHH--HHH-E----- :dssp
define       : --EEEEEEEEE-HHHHHHHHHH----EEEEEEEEEEE----HHHHHHHHH----EEEEEHHHHH--------EEEEHHHHHHHHHHHH----EEEEEE--------HHHHHHHHHHHHHEEEEEEEEEHHHHHHHHH----EEEEE---EEEEEEE------HHHHHHHHHH--EEEEEEE-HHHHHHH--------EEEEE----EEEEHHHHHH---EEEEEHHHHHHHHHHHEEEE-EEEE-----HHHHHHHHHHHHHHH--EEEE----HHHHHHHH----------- :define
stride       : --------EE-HHHHHHHHHH------EEEEE----------HHHHHH--E----EE-------------------HHHHHHHHHHH------EEEEE--------HHHHHHHHHHHH----EEEE--HHHHHHHH----E-------------------EE--HHHHHHHHH---EEEE---HHHHH--------------EE---EE------EE---EE--HHHHHHHHHHH-------EEEE------HHHHHHHHHHH-----EEE-HHHHHHHHH--HHHEE----- :stride


Q3 values for 1rhd  View SS in Rasmol

	dssp	define	stride
phd	76.11	57.34	76.11
dsc	66.89	51.88	65.19
pred	77.47	58.36	76.79
mul	71.33	51.54	69.28
nnssp	74.74	54.27	73.38
zpred	65.53	51.19	64.51
cons	76.79	56.66	76.11