Results for 1rie-1-GJB


1rie-1-GJB    : AMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPSYEFTSDDMVIVG : UCRI_NEUCR
UCRI_NEUCR    : AMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTPAEIEEANKVNVATLRDPETDADRVKKPEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPLYEFPEEGKLVI. : UCRI_PARDE
UCRI_PARDE    : ALASIQVDVSGVETGTQLTVKWLGKPVFIRRRTEDEIQAGREVDLGQLIDPATDENR..AGEWLVMIGVCTHLGCVPIGDGADFGGWFCPCHGSHYDTSGRIRRGPAPQNLHIPVAEFLDDTTIKLG : UCRI_SPIOL
UCRI_SPIOL    : LPYAFFVPPGGGATGGTIAKDALGNDVIAAEWLKTHAPGDRTLTQGLKGDPTYLVVESDTLATFGINAVCTHLGCVVPFNAA.ENKFICPCHGSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVP : UCRI_MAIZE
UCRI_MAIZE    : ALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRHPEQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKLLV. : UCRI_HUMAN
UCRI_HUMAN    : ALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIV. : RCFBC
RCFBC         : AMSSIFVDVSAVEVGTQLTVKWRGKPVFIRRRDEKDIELARSVPLGALRDEATDENRSLTGEWLVMLGVCTHLGCVPMGDKSDFGGWFCPCHGSHYDSAGRIRKGPAPRNLDIPVAAFVDETTIKL. : S75804
S75804        : VITG..C.FGGNS......SNGQGQTVNVG..TMADLKAKGELKGNTPKGPVTVVPNGNSGQISAVNPTCTHNGCQVNWKKA.NGKFVCPCHGAEFAATGKVLKGPAIRDLPTYATQVSGNNILVKA : S63700
S63700        : GQMNIEAEVGELEDRECKTVVWRGKPVFVYRRSERQMNDVLGTPLSALKHPETDEARFPHREMAVVIAICTHLGCIPIPNEGLFGGFFCPCHGSHYDASGRIRQGPAPLNLEVPPYRWVDDKTIYLG : CRUCCOR
CRUCCOR       : ALSSLEVDLSGVEEGTTITVKWRGKPVFIRHRTDAEIAQSAEVALSELRDPQKDVDRAINPKYLVVVGICTHLGCVPISGAGNYQGWFCPCHGSHYDISGRIREGPAPYNLEVPEYRFTEGQKVVI. : UCRI_YEAST
UCRI_YEAST    : AMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEFDGD.KVIV. : UCRI_RHORU
UCRI_RHORU    : ALASTEVDVSAIAEGQAITVTWRGKPVFVRHRTQKEIVVARAVDPASLRDPQTDEARVQQAQWLVMVGVCTHLGCIPLGQKADFDGWFCPCHGSHYDSAGRIRKGPAPLNLPVPPYAFTDDTTVLIG : UCRI_BRAJA
UCRI_BRAJA    : AAGAIEVDLSPIAEGQDIKVFWRGKPIYISHRTKKQIDEARAVNVASLPDPQSDEARVKHEQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQGPAPANLPVPPYQFVSDTKIQIG : JQ0345
JQ0345        : AAGAIDIDISPVTEGQIVRVFWRGKPIFIRHRTAKEIQSEEAADVGALIDPQPDSARVKKAEWLVVYASCTHLGCIPLGHQGDWGGWFCPCHGSQYDASGRVRKGPAPTNLPVPPYEFVDNTKIRIG : THTR_AZOVI

              : 70--------80--------90--------100-------110-------120-------130-------140-------150-------160-------170-------180-------190---- :
OrigSeq       : AMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPSYEFTSDDMVIVG :OrigSeq
cons          : ----EEEE--------EEEEEE----EEEEE--HHHHHHH----------------------EEEEEEE-----EE-----------EE------------EE------------EEE----EEEE- :cons
dsc           : ----EEEEE--------EEEEE----EEEEE---HHHHHHHHHHEEE------HHHHH----EEEEEEEE----EEE---------EEE-----------EEE------------EEE----EEEE- :dsc
mul           : --HHHHHH---------EEEE-----EEEE-----HHHHHHHH-----------HHHH---HHEHHEEEE----EEE----------------------------------EE----------EEE- :mul
nnssp         : ----EEE----------EEEEE----EEEE----HHHHH-----------------------EEEEEEE-----------------------------------------------------EEEE- :nnssp
phd           : ---EEEEE--------EEEEEE----EEEEE--HHHHHHH---------------------EEEEEEEE-E---EE-----------EE------------EE------------EEE----EEEE- :phd
pred          : ----------------EEEEEE----EEEEEHHHHHHHHHHHHHH-----------------EEEEEEEE--------------------------------------------------------- :pred
zpred         : HHHHHHEE----------EE------EEEE-----HHHHHHHHHHE-------HHH-----HHEEEEEEEEEEEEEEEE--------EEE--------EEEEEEEE---EEEEEEEEHHHHHHHEEE :zpred


access        : EBBEBEBEBEBBEEBEEBBBEBEEEEBBBEE-BEEEBEEEBEBEBBBBEEEEEEEEEBEEEEBBBBBBBBBBBBBBBBBEEBEBEBBBBBBEBEE-EBBEEB-EEEBEBEBEBBBBEB-EEBEBBBE : access

PHD Rel       : 9826876224667895269983387358882571244211111345676985342223687289999741145333234677789831147766546453221289878898884133266244659 : PHD Rel
Pred Rel      : 0077766666689976599886999770985778799888888007778000775666099659996557688806689899999777987999887778767899999990888777899875000 : Predator Rel


dssp          : ----EEEEHHH-----EEEEEE--EEEEEEE--HHHHHHHH---HHH------HHH------EEEEE----------EE-----EEEEE----EEEE----EEE-----------EEE----EEEE- :dssp
define        : ---EEEEE-------EEEEEE---EEEEEEE-HHHHHHHHHHH---------HHHHHH----EEEE------EEEE---------------EEEEEE-------------EEEEE-------EEEEE :define
stride        : ----EEEEHHH----EEEEEEE--EEEEEEE--HHHHHHHHH--HHH------HHH------EEEEE----------EEEE----EEEE----EEE-----EEE-----------EEEEE--EEEE- :stride


Q3 values for 1rie-1-GJB  View SS in Rasmol

	dssp	define	stride
phd	77.17	68.50	74.02
dsc	75.59	66.93	74.02
pred	66.14	66.93	64.57
mul	57.48	70.08	55.91
nnssp	71.65	69.29	68.50
zpred	51.18	52.76	51.18
cons	79.53	69.29	76.38