Results for 1seib-1-AUTO.1


1seib-1-AUTO.1    : VMTDPIADMLTAIRNANMVRHEKLEVPASKIKREIAEILKREGFIRDYEYIEDNKQGILRIFLKYGPNERVIT : RS8_MICLU
RS8_MICLU         : TMTDPVADMLTRLRNANSAYHDTVSMPSSKLKTRVAEILKAEGYIQDWREEEAEVGKKLTIDLKFGPQERAIA : RR8_TOBAC
RR8_TOBAC         : MGRDTIAEIITSIRNADMDRKRVVRIASTNITENIVQILLREGFIENVRKHREKNKYFLVLTLRHRRNYRNIL : RS8_METVA
RS8_METVA         : SLMDPLANALNHVSNCEGVGKVAYLKPASKLIGRVLKVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINRYAVK : RS8_HAEIN
RS8_HAEIN         : SMQDPIADMLTRIRNGQAANKVAINMPSSKLKVAIANVLAAEGYIESVKVLEGA.KPELEITLKYFQGVVESI : S73978
S73978            : AHFDPVADLLTKINNARKAKLMTVTTIASKLKIAILEILVKEGYLANFQVLENKTKRIVTFNLKYTQRSINGV : MASPS8
MASPS8            : MGKDTIADIITSIRNADMNKKGTVRIASTNITENIVKILLREGFIENVRKHQEGNKYFLVSTLRHRKTHRTIL : RS8_THETH
RS8_THETH         : MLTDPIADMLTRIRNATRVYKESTEVPASRFKEEILKILAREGFIKGYERVEVDGKPYLRIHLKYGPREQVIK : RS1A_KLUMA
RS1A_KLUMA        : TRTSVLADALNAINNAEKTGKQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNRFNVK : CCPRIBA1
CCPRIBA1          : VVNDTIADMLTRIRNANLAKHKVARVKATKITRCLANVLKEEGLIQNFEEIENNLQNELLISLKYKGKIITAL : SSSPCOPER4
SSSPCOPER4        : PSINPLANALATLYNNEMRRNQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGKIIVQLLGRINRYPLD : RS8_HALMA
RS8_HALMA         : TGNDPFANALSALNNAESVGHEQTVSPASNEIGSVLEVFYDRGYIDGFSFVDDGKAGEFEVELKGAINRYSAG : RS8_MYCCA
RS8_MYCCA         : MTTDVIADMLTRIRNANQRYLKTVSVPSSKVKLEIARILKEEGFISDFT.VEGDVKKTINIELKYQG.TRVIQ : RS8_STRCO
RS8_STRCO         : ..........TRLRNANSAYHDSVTMPASKIKSHIAEILQQEGFITGWKTEDAEVGKNLTLELKFGPNERSIA : RR8_PINTH
RR8_PINTH         : MGNDTITNLITSIRNADMVEKGTVRVTATNITKNIGRILLREGFIEDVREHQEGQKYFLISTSKYRRRYMTTS : RR8_MARPO
RR8_MARPO         : MGNDTIANMITSIRNANLGKIKTVQVPATNITRNIAKILFQEGFIDNFIDNKQNTKDILILNLKYQGKYITTL : RR8_PORPU
RR8_PORPU         : VVNDTVADMLTRIRNANLARHQIVQVPATKVTRNMALVLKEEGFVHNFEQMGEGIETHLMISLKYNGKVITAL : RR8_EUGGR
RR8_EUGGR         : TNIDVISDMLTRIRNSLLIKARKVNVINTKLTVNIAEILKKEGFIDSF..ELADIKKYITIFLKYKGPYITKI : RR8_ODOSI
RR8_ODOSI         : MVTDTISDMLTRIRNANMIKHQIVQIPATKMSKAITNILKEEGFIEDYEIYMENSYQFLLISLKYKGKVICKM : S77489
S77489            : ASTDTISDMLTRIRNACAVRHSTTQVPTTKMTLSIAKVLKSEGFIEDYSETGEGINKMLVLTLKYKGKLINTL : RS8_CHLTR
RS8_CHLTR         : MTSDSIANLLTRIRNALMAEHLYIDIEHSKMLEAIVRILKQHGFIAHFLVKEENRKRLMRVFLRYGEDVIHAL : RR8_ASTLO
RR8_ASTLO         : TTIDTISDVITRIRNANILKLDRVELINTKVAIGICHILKDRGFINSFGEFLNSIQKYIIVNLKYKGECIKEL : D64073

                  : 1---------11--------21--------31--------41--------51--------61--------71- :
OrigSeq           : VMTDPIADMLTAIRNANMVRHEKLEVPASKIKREIAEILKREGFIRDYEYIEDNKQGILRIFLKYGPNERVIT :OrigSeq
cons              : ----HHHHHHHHHHHHHH----EEEE---HHHHHHHHHHHH----------------EEEEEE-----EE--- :cons
dsc               : ----HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHH---HHHHHHHH-----HHEEEE---------- :dsc
mul               : -----HHHHHHH----------EEEE-----HHHHHHHHHHH-HH--HHHH-----HHEEEEE------E--- :mul
nnssp             : --HHHHHHHHHHHHH-------EEEE--HHHHHHHHHHHHH----------------EEEEEEE----EEEEE :nnssp
phd               : ----HHHHHHHHHHHHHH----EEEE-----HHHHHHHHHHH--------------EEEEEEE-----EE--- :phd
pred              : ---HHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHH----------------EEEEE----------- :pred
zpred             : -----HHHEHEHHHHHH--HEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE-----EEEEE :zpred

access            : EEEEBBBEBBBBB-BBEBBEEBBBEBBBBEBBBBBBEBBEEEBBBEBBEEBEEE-EEBBBBBBE-EEEBBBBE : access

PHD Rel           : 9995589999999954321334366235421289999997723412211112346517899871466121139 : PHD Rel
Pred Rel          : 0097768889807776765888567677765588999999869676775555777767766778899999000 : Predator Rel

dssp              : --HHHHHHHHHHHHHHHH----EEEEE--HHHHHHHHHHHH---EEEEEEEEE--EEEEEEEE-E----E--- :dssp
define            : --HHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHH-----EEEE--EEEEEEEEEEE--EEEE-- :define
stride            : --HHHHHHHHHHHHHHHHH---EEEEE--HHHHHHHHHHHHH----EEEEEEE--EEEEEEE--E----E--- :stride

Q3 values for 1seib-1-AUTO.1  View SS in Rasmol

	dssp	define	stride
phd	75.34	69.86	76.71
dsc	64.38	61.64	63.01
pred	68.49	73.97	72.60
mul	63.01	52.05	63.01
nnssp	69.86	69.86	68.49
zpred	53.42	52.05	52.05
cons	78.08	69.86	76.71