Results for 1tndb-2-DOMAK


1tndb-2-DOMAK    : SLEECLEFIAIIYGNTLQSILAIVRAMTTLNIQYGDSARQDDARKLMHMADTIEEGTMPKEMSDIIQRLWKDSGIQACFDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRS : GBQ_LYMST
GBQ_LYMST        : SDEDKRSHIKIVYQNIFMAMHAMIRAMDTLNIQYINPAN..RENGNMIRQIDYETTTFDKPCVDAIISLWNDDGIQECYDRRREYQLTDSAKYYLDSVERISQQDYLPTLQDILRV : B39394
B39394           : SEEDKRGFTKLVYQNIFTAMQAMIRAMETLKILYKLEQN..KANALQIREVDVEKTTFEHRYVSAIKTLWDDPGIHECYDRRREYQLSDSAKYCVTDVDCIATSSYLPTQQDVLRV : GB0_XENLA
GB0_XENLA        : SGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKERRADAKMVCDVVSRMEDEPYSPELLSAMVRLWADSGIQECFNRSREYQLNDSAKYYLDSLDRIGAPDYQPTEQDILRT : GBI_HOMAM
GBI_HOMAM        : SREECEQYRPVVYSNTIQSLMAIIRAMGQLKIDFRDSSRADDARHFFTLASAADEGELTPELANIMKRLWNESGVQHCRNRSREYQLNDTAAYYLNALDRIARPGYIPTQQDVLRT : NPGPROTSU
NPGPROTSU        : DEAELKNYIPVIHANVYQTIKVLHDGSKELAQSELEASKYLLSAENKDIGEKLSEPHLTKDLVQDIEALWRDPAIQETIL..NELQVPDCAHYFMENLQRFSDVNYVPSKEDVLFA : GBAS_XENLA
GBAS_XENLA       : NAEEKKTKVQDIKNNIKEAIETIVTAMGNLSPPVELVNPENQFRIDYILNLPNYKFEFSPEFYEHTKTLWQDEGVRACYERSNEYQLIDCAQYFLDKIDIVKQNDYTPSDQDLLRC : GBI2_CHICK
GBI2_CHICK       : SEEECRQYKAVVYSNTIQSIMAIIKAMGNLQIDFGDSSRADDARQLFALACTAEEGIMPEDLANVIRRLWADHGVQACFNRSREYQLNDSAAYYLNDLERIARADYIPTQQDVLRT : GBAS_LYMST
GBAS_LYMST       : SPEERKQKIEDIKRNVRDAILTITGAMSTLNPPVQLEHPQNKAKVDYIQDKASQAFDYPPIFYEYTEILWKDKGVQAAFERSNEYQLIDCAQYFLDRVHIIRQAEYTPSEQDILRC : S49983B
S49983B          : SPEECLEFKSVIYGNVLQSILAIIRAMSTLGIDYADPGCVDYGRQLNNLADSTEEGTMPPELVEFISKLWKDGGVQACFDRAAEYQLND........................... : GB15_HUMAN
GB15_HUMAN       : SEEERKGFRPLVYQNIFVSMRAMIEAMERLQIPFSRPES..KHHASLVMSQDPYKTTFEKRYAAAMQWLWRDAGIRACYERRREFHLLDSAVYYLSHLERITEEGYVPTAQDVLRS : GBT_XENLA
GBT_XENLA        : SVEECLEFIAIIYGNTLQSMIAIVKAMNTLNIQFGDPARQDDARKLMHLADTIDEGSMPKEMSDIIGRLWKDTGIQACFDRASEYQLNDSAGYYLNDLDRLVIPGYVPTEQDVLRS : ENU49917
ENU49917         : SRDERESFKEIIYSNTVQSMRVILEAMESLELPLEDARNEYHVQTVFMQPAQIEGDSLPSEVGNAIAALWQDAGVQECFKRSREYQLNDSAKYYFDSIERIAQSDYLPTDQDVLRS : PCU30790
PCU30790         : TLKEREYYRTIIFSNMLQAMRLIIEAMEEFDICFERRENEQYLDLLLQERELTDRENLPPEYYRPFISLWEDAGVMRAVNRGNEYALHDNCFSFFENIHRLFERKYIPTDQDILRC : I57490
I57490           : DQRAREEFRPTIYSNVIKGMRVLVDAREKLHIPWGDNSNQQHGDKMMSFDTRAPMTRVFLQYLPAIRALWADSGIQNAYDRRREFQLGESVKYFLDNLDKLGEPDYIPSQQDILLA : GBAZ_RAT
GBAZ_RAT         : NLEACKEYKPLIIYNAIDSLTRIIRALAALKIDFHNPDRAYDAVQLFALTGPAESGEITPELLGVMRRLWADPGAQACFGRSSEYHLEDNAAYYLNDLERIAAPDYIPTVEDILRS : GBAF_RAT
GBAF_RAT         : NPEEKKQKILDIRKNVKDALVTIISAMSTIIPPVPLANPENQFRSDYIKSIAPITFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTDQDLLRC : S56670
S56670           : DEAELRSYTSVIHANVYQTIKILYEGAKELSQVESDSSKYVISPDNQEIGEKLSDPLLNKELVLDVKRLWQDPVIQETYL..SILQLPDCAQYFMENLVRLAEAGYVPTKEDVLYA : GB12_MOUSE
GB12_MOUSE       : DQKALLEFRDTIFDNILKGSRVLVDARDKLGIPWQHSENEKHGMFLMAFENKAGLPATFQLYVPALSALWRDSGIREAFSRRSEFQLGESVKYFLDNLDRIGQLNYFPSKQDILLA : CEF18E2
CEF18E2          : TESEYFHRRAFIYHNIFKSIKALCRAMRMSDIQFADPINMGRAQSIIADEHGHYG.LFSKDLAEKIKHIWNDKSMQKLYARRSQFNLNDSAS........................ : GBAS_SCHMA
GBAS_SCHMA       : SEREKKEKIDAIRKNLRDAICSIAGAMGSLKPPVKLELSENRKLRDYILETASKPFDYPPEFFTYCAKLWKDGGIQETFERSNEYQLIDCAKYFLDKALEVGAPNYIPSEQDILRC : GBQ_LOLFO
GBQ_LOLFO        : SEEDRKGFEKIVYQNIFSAIQTLIAAMETLSLEYKDPSN..NEHAEFLNSIDADSDIFEDGHVTAIKGCWTDPGMQECYDRRREYQLTDSAKYYLDDVERIHEPGYIPTLQDILRV : CELM01D76
CELM01D76        : SEEDKRAHIRLVYQNVFMAIQSMIRAMDTLDIKFGNESEELQEKAAVVREVDFESTSFEEPYVSYIKELWEDSGIQECYDRRREYQLTDSAKYYLSDLRRLAVPDYLPTEQDILRV : GB05_DROME
GB05_DROME       : SQEECEEYRRVVFSNTVQSLMVIIRAMGRLKIEFADPSRTDIARQFFTHASAADEGILLPEIVLLMKKLWADGGVQQTFARSREYQLNDSAGYYLNSLDRIAQPNYIPTQQDVLRT : AB001742
AB001742         : SEDECKQYRAVVYSNTVQSIMAIIKAMTILHLDYERPEREEDAKRLFKMAAEAEEGDLPEELANIIKDLWADSGIQHCLTRAREYQLNDSAAYYLKDLERISKPDYIPTQQDVLRT : SAU84790
SAU84790         : TKEEQLEFRAIIYGNILQSALAIIRGMEMLGIDFGSSTGQEDAQKLQNLSDSIEEGTMPSELADVIKKLWADSGVQASFERAAEFQLNDSAGYYLNEMERICKPEYLPTEQDVLRS : GBT3_RAT
GBT3_RAT         : SKQECMEFKAVVYSNTLQSILAIVKAMTTLGIDYVNPRSREDQQLLLSMANTLEDGDMTPQLAEIIKRLWGDPGIQACFERASEYQLNDSAAYYLNDLDRLTAPGYVPNEQDVLHS : YSACAG1A
YSACAG1A         : .GTDFLNDFVVKYSEENKNKR.RLKSTGTTDIWGKDDDNSDAINQALELSLNKDSQFTRLSIAEAIHKLWKDSGIKKCFDRSNEFQLEGSADYYFDNVVNFADTNYLSTDLDILKG : GBA1_DICDI
GBA1_DICDI       : NDEEKSSYKTIIYNNTVGSMRVLVNAAEELKIGISENNKEAASRISNDLGDHFNG.VLTAELAQDIKALWADPGIQNTFQRSSEFQLNDSAAYYFDSIDRISQPLYLPSENDVLRS : GBA_LEIDO
GBA_LEIDO        : PLSSASVNATSTLLSTATISRSSSTFANFLMSGTSWRSRRQRLKIVDVGGQRSQR.KLTAELAQDIKALWADPGIQNTFQRSSEFQLNDSAAYYFDSIDRISQPLYLPSENDVLRS : GBA6_DICDI
GBA6_DICDI       : TTKELQEFSNTIYINIITQLQVLINAAESIGIQLQPE.NIQLSKDYLELNHSSVT..WTKEIGENSVRLWNDSGIKSTFEKRKEFQLNDSAEYFFNNLQRVTQDNYIPTPQDALRA : GBA2_YEAST
GBA2_YEAST       : SEQEIKEYIPLIYQNLLEIGRNLIQARTRFNVNL..EPECELTQQD..LSRTMSYGQFPEDIAGVISTLWALPSTQDLVNGPSKFYLMDSTPYFMENFTRITSPNYRPTQQDILRS : GBA2_KLULA
GBA2_KLULA       : SREELLEYKPFIFDNIIETGKDLAKARRTFNVQL..EEDAEISESD..LDELLSQPCLPADLAKTLKILWNLQSTQDLLVSESSFYLMDSASYFYENLDRISEPKYIPTITDVIRT : GBAF_DROME
GBAF_DROME       : TDDERREKIPEIYQNIHESILQLVGQMGVLGIDFGSCTSERSADYILSLPGSAPE..MNEEYCDHVTTLWNDVGIRACYDRSNEFPLLDSAKYFLDNFVRISDAEYIPSTEDILHS : CELB02073
CELB02073        : TDQELIQYRGLIDNNIRDIYLQLIAGSRVVGIPLDPIEHITYEIDEIYAPMSDAFVRTISELLEPLTEFWNSKQIQEIYKRRCEFELLDSTKYYLENLTRIADPTYLPNQEDIVHS : GBA7_DICDI
GBA7_DICDI       : SQEERINQRQFVYRNIIEIAYSIIRGCGVLNLTIPSQFDSICSSIEEIYETKNYT..LDKNVLKGVAELSKNESFINAANNSSNFQLHSSSQYFLDDIARFSEEDYIPTDQDILYT : CEF56H93
CEF56H93         : SAEEKMVRKHGIYMNILEGIEEIHLSVGRENKSYKNPLSFDHINEVRMFTENFKKKLLGPEVINAIQKYIKDETIAMMLRDKTVYNIDDSTIYFLENFSRIIQKDYLPTEEDILKS : CEM04C7
CEM04C7          : SKADLKNVAGTVYSNIIQGVATLLKAKDHFYYELSTPELDADAQHILSLADSSKDMPFIPLTFNAIKRLWHDPVVQKTFERRAEFQMMDTLVYFMNELDRINNADYIPTVDDMLRI : GBA2_CAEEL
GBA2_CAEEL       : TDEELLTQAKLVYTNIVIEMDHLVKAMPAAGLNFSDPMREHDVHMLTLYIKDMQHKNFQQDAADHVEKLWKDPVVKRLYAERNIRDIGDNTEYFFENLPRISKEDYHPNATDTLLL : UMU85776
UMU85776         : TDEERENFRRLVFLNLVQGMKTILDVMEEWSIDFQDDSNIDHLLLFVSYPDISEDEPFPTNYLVALKDLWLDQGVQSVYRRGNEAAVPDNMSYYYTDLDRLFSPSYIPSEDDILRC : GBA1_NEUCR
GBA1_NEUCR       : SKNEKLEWRPVIFANILQSFRLIFDAMNEFNIKLEDEDNEKNMVQMMVDYEMRGDEPLPLEYFEPAKKLWQDSGVRQAIEKGNEFALHDNLQYFCSDLDRLWDRNYVPSDQDLLRS : CRPGNRPB
CRPGNRPB         : SDEELYNYRPTVFKNLIECAKAVVNAMRQFDIE....PEKEETKTL..CDFLLEYVLIDTRVGEAIQAIWNDPARKQLMD..TEFYLMDSAEYFFEQAQRIVRQDYLPNEMDVLRA : GBA1_CRYNE
GBA1_CRYNE       : SKDELLSFRGVIYKNVLDSAQALIMAMRKIGVD....PEDANNRSY..ADRILEYAVIPSEILYNIESLWHDPVIPSVMD..SEFYLMDSATYFFANIRKIAGPDYVPDEADVLRA : UMU85777
UMU85777         : TKDELLLYRLTVIKNLVDSAQAMVLALRKFKME....PEMPENREN..VDAILQYATLDHAMARKVDSLWKDPIVPAIME..SEFYLMDSAAYFFDNVNRIGQSDYVPNENDVLRA : GBA2_DICDI
GBA2_DICDI       : SNEERKEFKPIITRNILDNMRVLLDGMGRLGMTIDP.SNSDAAVMIKELTSLQASGELNEDQGKKIKALWTDPGVKQAMRRAEFSTLPDSAPYFFDSIDRMTSPVYIPTDQDILHT : UMU85775
UMU85775         : SAEERESYKEIIFSNTVQSMRVLLDAMERLDIPLADATNAPRAEIILGLSPSIESSVLPRQVADAIHALWGDAGVQACFGRSREYQLNDSAKYYFDSIQRMAEPSYLPTDQDVLRS : GBA1_COPCO
GBA1_COPCO       : SDQEKDSYKEIIFSNTVQSMRAILDALPALDLALQPANDARRATILAVPG.QIEAEVLPRDIADAIRQLWADPGLKEAVRRSREFQLNDSAVYYFNSIDRMSAPGYLPTDQDILRS : GBA4_DICDI
GBA4_DICDI       : SVEELLEYRAFVYSNCISQMEALLTASAKLNIELEVE.NKQRAANVLRRTIG.NE..PWLLLAADIKHLWEDKGIKETYAQKKHFQLNDSAAYFFDNIDRYMREDFVPNEQDVLRC : GBA5_DICDI
GBA5_DICDI       : SIDERLEYRYIIYGNCISQMKVLVTAAISQDLKPNNPDNETRFEKFSKISPGGNS..WTLEIAEDIKQLWSDDSIQNIYRMKKFYQLNDSAAYFFDNIGRFANENYVPTQDDVLRS : CELF18G51
CELF18G51        : TADEVRAYRQQIYQNAISAMRVLLDARNKLGIAWEDPKRQVEVEKVMRFSVGDLLFTTFVEVAPIISDFWNDAAIRKTYEQRNLFQISDSCQYFFEHIPRIAMPDFYPTNRDILFC : GBAL_DROME
GBAL_DROME       : DYELLLEYQSVIYQNVIRGMQVLLDAREKLNIAWGSDGR....EQDAYDAKLMECVPKFMEYAPPISRLWQDRGIRRAFERRREFQISDSVSYFLDEIQRLATPDYVPTHKDILHC : GBA1_CAEEL
GBA1_CAEEL       : SQEEISNKRNVVCANTVQAMGALLDGMKQLQFDFSTRVCNAHEKLIRETLNDKA.GPFSDAMFNALTELWADKGVQCAYDKREFFYLHDSAKYFLDRIARVHTPNYVPTENDILHT : GBA3_CAEEL
GBA3_CAEEL       : TAEEAEQQKSVVFNNTLQAMTAILKGMEALRMTFDKPIRENDAKFVMESHKMLQEKVFPEELANAIQALWNDKAVQQVIAKGNEFQMPESAPHFLSSLDRIKLPDYNPTEQDILLS : CER10H105
CER10H105        : SQQDLEMIRPVVYSNCIHSMLSILRAMFHLQIEYGEPDRVRDSQLVFATVHANKE..LTEELAAAMQRLWHDPGVRECYRRSNEYQIDDSAKYFLDNLPRLSSPNYVPSEQDLLRT : CEC34D12
CEC34D12         : TEEEVNEKRAIVYNNTVSAMCTILRAMDGVLHLPLENGQKEAEKAIVMKVQENGEEALTEEVSKAIQSLWADPGVKKAFEMRSEYQLPDSAKYFLDNCQRISEPGYRPNDQDILYS : CEF48C112
CEF48C112        : AKEDALEYLSIIHSNCMEALTQLVDACTAFGINHDITVQEDVNRFEDFKRKLRDPLVIPVVIGRCMDRVWHSPSLQLCYDTRFRFALLDSAKYFMDNIVRLTEDNYVPSIQDIVHC : GBA8_DICDI
GBA8_DICDI       : DDDELHSYAVNIHKNTVLCMQVLLEAGETLGIELTDPETKKRAINVKSFQFEPEV.QMPVSIGLDIEELWRDEDIQKIWDRRSEYWFLDATPYYFENIQRFLDDDFVPTEEDCIMT : GSBP_CHICK

                 : 58--------68--------78--------88--------98--------108-------118-------128-------138-------148-------158-------168--- :
OrigSeq          : SLEECLEFIAIIYGNTLQSILAIVRAMTTLNIQYGDSARQDDARKLMHMADTIEEGTMPKEMSDIIQRLWKDSGIQACFDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRS :OrigSeq
cons             : ---HHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHH---------HHHHHHHHHHHH---HHHHHHHHHHH----HHHHHHHHHHHH---------HHH--- :cons
dsc              : ---HHHHHHHHHHHHHHHHHHHHHHHHHHEEE--------HHHHHHHHHH--------HHHHHHHHHHHHH---HHHHH----------HHHHHHHHHHHH--------------- :dsc
mul              : -HHHHHHHHHEEE----HHHHHHHHHHHHHH-----------HHHHHHHHH-------HHHHHHHHHHH------HEHH-------------EEHH---H-----------HHEE- :mul
nnssp            : -HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHH-------HHHHHHHHHHHH---HHHHHHHH--------HHHHHHHHHHHH-------HHHHHHH :nnssp
phd              : --------EHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHE----------HHHHHHHHHHH----HHHHHHHHHHH---HHHHHHHHHHHHH---------HHH--- :phd
pred             : --------HHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHH--------HHHHHHHHHHHH---HHHHHHHHHHHH-----HHHHHHHH----------------- :pred
zpred            : HHHHHHHHHHEEEEEEHHHHHHHHHHHHHHE--------HHHHHHHHHH---------HHHHHHHHHHHH------EEE----HHHHH-----EE---------------EEEEE- :zpred

access : EEEEBEEB-BBBBBBBBEBBBBBBEBBEEBEBEBEEEEEEEEBEBBBBBBEEBEEEEBBEEBBEBBEEBBEEEBBEEBBEEBEEBEBEEBBEBBBEEBEEBBEEE-BEEEEEBBEE : access PHD Rel : 95332133013344469999999999998513457885302456743211134678875489999999981787776453222122214679999999876277788672112259 : PHD Rel Pred Rel : 00777788776756768889999999888667679977778888777787788888887588889988885866077778656577677766778777555799999999776000 : Predator Rel

dssp : -HHHHH--HHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHH---------HHHHHHHHHHHH---HHHHHH-HHH------HHHHH--HHHHH-------HHHHH-- :dssp define : HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHH-EEEEEHHHHHHE :define stride : -HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHH--------HHHHHHHHHHHH--HHHHHHHHHHH-----HHHHHHH-HHHHH-------HHHHHH- :stride
Q3 values for 1tndb-2-DOMAK View SS in Rasmol dssp define stride phd 80.17 68.10 79.31 dsc 78.45 74.14 79.31 pred 79.31 67.24 78.45 mul 66.38 60.34 68.10 nnssp 87.93 87.07 92.24 zpred 62.07 52.59 60.34 cons 85.34 76.72 87.93