Results for 1trb-2-AS


1trb-2-AS    : RYLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIG : YHQ6_YEAST
YHQ6_YEAST   : KRMHLPGEETYWQQGISACAVCDGAVFRNKPLAVIGGGDSACEEAEFLTKYASKVYILVRKDHFRASVIMQRRIEKNP...NIIVLFNTVALEAKGDGKLLNMLRIKNTKSNV.ENDLEVNGLFYAIG : TRXB_EUBAC
TRXB_EUBAC   : RLAGCPGEQELTGKGVSYCATCDADFFEDMEVFVVGGGDTAVEEAMYLAKFARKVTIVHRRDELRAAKSIQEKAFKNP...KLDFMWNSAIEEIKGD.GIVESAVFKNLVTGE.TTEYFANGIFVFIG : TRXB_MYCTU
TRXB_MYCTU   : RYLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRASKIMLDRARNND...KIRFLTNHTVCAVDGD.TTVTGLRYRDTNTGA.ETTLPVTGVFVAIG : TRXB_STRCL
TRXB_STRCL   : RKLGLPREDALSGRGVSWCATCDGFFFKDQDIVVVGGGDTAMEEATFLSRFAKSVTIVHRRDSLRASKAMQDRAFADP...KISFAWNSEVATIHGE.QKLTGLTLRDTKTGE.TRELAATGLFIAVG : DHNA_BACSP
DHNA_BACSP   : RNVGVPGEQEFKNKGVAYCPHCDGPLFEGKDVAVIGGGNSGVEAAIDLAGIVNHVTVLEFMPELKADEVLQERLNSLP...NVTVIKNAQTKEITGD.DKVNGISYMDRDTEE.VHHIELAGVFVQIG : S44026
S44026       : KRLSFTGSGEFWNRGISACAVCDGAAFRNKPLVVIGGGDSAMEEANFLTKYGSKVYIIHRRDTFRASKIMQQRALSNP...KIEVIWNSAVVEAYGDENVLGGLKVKNVVTGD.VSDLKVSGLFFAIG : AHPF_SALTY
AHPF_SALTY   : RNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKVRSLK...NVDIILNAQTTEVKGDGSKVVGLEYRDRVSGD.IHSVALAGIFVQIG : D5045329
D5045329     : .....R..EEFGGMESSVTKMKQSSVLTPYRLEQLNGDEEGIKSVTVCHTESGQRKDIEIDEIINGFKIDLGPMMEWG....LEIEEGRVKADRHMRTN.LPGVFVAGDAAFY...ESKLR..LIAGG : GSHR_HAEIN
GSHR_HAEIN   : HILIATGGRPPNIKGQEYGIDSDGFFELPKRAAVIGAGYIAVELSGVLNSLGVETHLLVRRHPMRQDPLIVETLVEVLAQDGIQLHTNSTPSEIVKN....ADGSLTVRCDGQ..SDVTVDCVIWAAG : S41386
S41386       : HILIATGGHPPNIPGSEYGITSDGFFEVPKRTAVIGAGYIAVEVAGVLNALGSDTHLFVRKDPLRFDKDIIDVLVDEMAKSGPTLHMHANATEVVKN....ADDSLTISFDNE..ETITVDCLIWAVG : BSZ939392
BSZ939392    : RKLELENAEQYEGKNLHYFVD.DLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAHEHSVENLHASK....VNVLTPFVPAELIGEDK.IEQLVLEEVKGDR.KEILEIDDLIVNYG : TRXB_COXBU
TRXB_COXBU   : RYLGLPSEKPYMGKGVSACATCDGFFYRAKKVAVVGGGNTSVEEALYLSHIASHVTLIHRRDKLRAEKMLSAQLIKKVEEGKVAIVWSHVIEEVLGDDQGVTGVHLKHVKEEK.TQDLTIDGLFIAIG : TRXB_HAEIN
TRXB_HAEIN   : RYIGLPSEENYKGRGVSACATCDGFFYRNKPVGVIGGGNTAVEEALYLANIASTVHLIHRRDSFRAEKILIDRLYKKVEEGKIVLHTDRTLDEVLGDNMGVTGLRLANTKTGE.KEELKLDGLFVAIG : EHDO34
EHDO34       : KEACSRRRQILAKIGVSACAICDGAVFRNKVLMVEGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNHP...KIEVIWNSELVELEGDGDLLNGAKIHNLVSGE.YKVVPVAGLFYAIG : SPU63713
SPU63713     : RRLHITGEDTYWQAGISACAVCDGAVYRNKPLAVVGGGDSAAEEAQFLTKYGSKVYVLVRRDKLRASPIMAKRLLANP...KVEVLWNTVAEEAQGDGKLLNNLRIKNTNTNE.VSDLQVNGLFYAIG : TRXB_NEUCR
TRXB_NEUCR   : RRLHLPGEEKYWQNGISACAVCDGAVFRNKHLVVIGGGDSAAEEAMYLTKYGSHVTVLVRKDKLRASSIMAHRLLNHE...KVTVRFNTVGVEVKGDDKLMSHLVVKDVTTGK.EETLEANGLFYAIG : TRXB_PENCH
TRXB_PENCH   : RRLNLPGEETYWQNGISACAVCDGAVFRNKPLYVIGGGDSAAEEAMFLAKYGSSVTVLVRKDKLRASNIMADRLLAHP...KCKVRFNTVATEVIGENKLMTHLRVKDVLSNA.EEVVEANGLFYAVG : JC2311
JC2311       : RKINVPGEKEFFNKGVTYCPHCDGPLFTDKKVAVIGGGNSGLEAAIDLAGLASHVYILEFLPELKADKILQDRAEALD...NITILTNVATKEIIGN.DHVEGLRYSDRTTNE.EYLLDLEGVFVQIG : XCU943361
XCU943361    : RQMNVPGEDQYKNKGVAYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVAHVTLVEFDDKLRADEVLQRKLRSLH...NVRIITSAQTTEVLGDGQKVTGLVYKDRTGGD.IQHIELEGVFVQIG : SAU924411
SAU924411    : RKLNIPGEEQLINKGVAFCPHCDGPLFENKDVAVIGGGNSGVEAAIDLAGIVNHVTLFEFASELKADNVLQDRLRSLS...NVDIKTNAKTTEVVGE.DHVTGIRYEDMNTGE.EHLLNLDGIFVQIG : A49911
A49911       : RDIGVPGEKEYKNKGVAYCTHCDAPLFEGKHVAVVGGGNSGIESALDLAGIVKHVTVFEFMSELKADAVLQERLRSLP...NVDVILNAQTTEITGD.ETVKGISYIDRTTNE.EKHVELQGAFIQIG : R34K_CLOPA
R34K_CLOPA   : RRLPIPEEEKLHGKVIHYCELCDGALYQGKDLVVVGGGNSAVEAAIFLTKYARNITIVHQFDYLQAQKYSQDELFKHK...NVKIIWDSEIRNIVGENE.IEKIVVENVKTKQ.KTELKADGVFVYIG : BSZ940436
BSZ940436    : KKIGVPGEKELGGRGVSYCAVCDGAFFKGKELVVVGGGDSAVEEGVYLTRFASKVTIVHRRDKLRAQSILQARAFDNE...KVDFLWNKTVKEIHEENGKVGNVTLVDTVTGE.ESEFKTDGVFIYIG : S73917
S73917       : RKLGVAKEDHFYGKGISYCAICDGSLYKDQVVGVVGGGNSAIQEALYLASMAKTVHLIHRREGFRADETALNKLRNLP...NVVFHLNYTVKELLGN.NTLNGIVLQNTLDHS.TKQIDLNCVFPYIG : TRXB_MYCGE
TRXB_MYCGE   : RKLGIEKEDYFYGKGISYCAICDAALYKGKTVGVVGGGNSAIQEAIYLSSIAKTVHLIHRREVFRSDALLVEKLKKIS...NVVFHLNATVKQLIGQ.EKLQTVKLASTVDKS.ESEIAIDCLFPYIG : BBU829782
BBU829782    : KKLETLKNSGFWNKGISVCAICDGHLFKGKRVAVIGGGNTALSESIYLSKLVDKVYLIVRKNNLRAIAMLRDSVAKLP...NIEILYNSEAIEVDGKSS.VSSVKIFNKKDNV.VYELEVSAVFMAVG : G64491
G64491       : KKLGLN.EDKFIGRGISYCTMCDAFFYLNKEVIVIGRDTPAIMSAINLKDIAKKVIVITDKSELKAESIMLDKLKEAN...NVEIIYNAKPLEIVGEER.AEGVKISVNGKEE...IIKADGIFISLG : GBA1_DICDI

             : 117-------127-------137-------147-------157-------167-------177-------187-------197-------207-------217-------227-------237----- :
OrigSeq      : RYLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIG :OrigSeq
cons         : ----------------EEEE----------EEEEE----HHHHHHHHHHHH--EEEEEEE--HHHHHHHHHHHHHHHH----EEEEE---EHHH------EEEEEEEE---------EEEEEEEEE-- :cons
dsc          : ------------------------------EEEEE------HHHHHHHHHH---EEEEHHHHHHHHHHHHHHHHHHHH----EEEEE-----EE------EEEEEEE----------EEEEEEEEE-- :dsc
mul          : ----------------EEEE-----H-----EEEE-------HHHHHHHHHH-HEEEE-HHHHHHHHHHHHHHHHHH-----EEEEE----HHH---------EHEH--------HHHH-HHEEEEE- :mul
nnssp        : ----------------EEEE-----------EEEE-----HHHHHHHHHHH--EEEEEE----HHHHHHHHHHHHHHHH----EEEE---HHHHH--------EEEE---------------EEEEE- :nnssp
phd          : ---E-----------EEEEEE---------EEEEE----HHHHHHHHHHHH--EEEEEEE--HHHHHHHHHHHHHH------EEEEE---EHHH------EEEEEEEE-------EEEEEEEEEEE-- :phd
pred         : ----------------EEEE---------EEEEEE----HHHHHHHHHHHHHHEEEEEE-HHHHHHHHHHHHHHHHHH----EEEEE----EEE-------EEEEEEE-------------EEEE--- :pred
zpred        : --------HH------EEEE---HHHHHHHEEEEEE----HHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHH-------EEEE----HHHHHH-----EEEEEE--------HHHHHHHEEEEEE :zpred


access       : EE-E-EEEEE-EEEEBBBBBBBEB--BEEEEBBBBEEE-EBBEBBB-BBEBBEEBBBBE--EEBEBEEBBBEEB-EEEEEEEB-BBBE-EBEEBEEEEEEBEEB-BEE--EEEEEEEBEBEBBBBB-E : access

PHD Rel      : 99203664111377626887517831267368886598269999999986167178886065145669999999846899846888613111213898632456776527888842455656788729 : PHD Rel
Pred Rel     : 00509990856778879997899987779869000699768888998884666589096776688899999988858689765995576557656899886677766778777755675666688000 : Predator Rel


dssp         : -----HHHHH-E---EE--HHHHHHHH---EEEEE---HHHHHHHHHH-----EEEEE---------HHHHHHHHHHHH---EEEE---EEEEEEE----EEEEEEE--------EEEE--EEEE--- :dssp
define       : EEE-HHHHHHHH--EEEE----HHHHHH-EEEEEEEEHHHHHHHHHHHHHH--EEEEEE-------HHHHHHHHHHHHHH-EEEEEEEE---EEEEE-----EEEEE-----EEEEEEE--EEEEE-E :define
stride       : -----HHHHHH----EE--HHHHHHHH---EEEEE---HHHHHHHHHHH----EEEEE---------HHHHHHHHHHHHH--EEEE---EEEEEEEE--EEEEEEEE--------EEEE--EEEE--- :stride


Q3 values for 1trb-2-AS  View SS in Rasmol

	dssp	define	stride
phd	67.19	57.03	65.62
dsc	65.62	57.03	64.06
pred	65.62	58.59	64.06
mul	55.47	49.22	53.91
nnssp	63.28	57.81	61.72
zpred	57.81	53.91	56.25
cons	67.19	57.81	65.62