Results for 1trkb-3-AS


1trkb-3-AS     : KGGYVLQDVANPDIILVATGSEVSLSVEAAKTLAAKNIKARVVSLPDFFTFDKQPLEYRLSVLPDNVPIMSVEVLATTCWGKYAHQSFGIDRFGASGKAPEVFKFFGFTPEGVAERAQKTIAFYKGDKLISPLKKAF : ATAC00238718
ATAC00238718   : KGGYTISDNSTPDVILIGTGSELEIAAQAAEKLREQGKSVRVVSFVCWELFDEQSDAYKESVLPSDSARVSIEAGSTFGWGKIVGGKGIIDTFGASAPAGKLYKEFGITIEAMVEAAKSL................. : TKT_MYCLE
TKT_MYCLE      : RGGYVLGDGGSPDVILIATGSEVQLAVAAQKLLADKDIIVRVVSMPCVEWFESQPYEYRDSVLPPSSARVAVEAGVAQCWHKLVGDTGVIEHYGESADYQTLFREYGFTPEAVVAAAEQVLD............... : TKT7_CRAPL
TKT7_CRAPL     : KGGYVISDNSRPDVILIGTGSELEIAARAGDELRKEGKKVRVVSLVCWELFAEQSEKYRETVLPSGTARVSVEAGSTFGWERFIGPKGVIDRFGASAPAERLFKEFGITVEAVVAAAKEI................. : TKTP_ALCEU
TKTP_ALCEU     : RGGYVLRDVP.PRVVLIATGSEVEIAARAALDLADAGIAARVVSMPCVELFYAQDAAYRDSVLPPGLPRISVEAGATWYWRGVVGEQGLIDSFGESAPAEALYQHFGLTPAHVAAAARVLLED.............. : A20319
A20319         : AAGYILEDAENAEVQIIGVGAEMEFADKAAKILGR.KFRTRVLSIPCTRLFDEQSIGYRRSVLRKDVPTVVVDGHVAFGWERYATASY.MNTYGKSLPPEVIYEYFGYNPATIAKKVEAYVRACQRDPLLLHRLPGP : TKTC_METJA
TKTC_METJA     : KGKILVDG...EDLTIIATGEEVPEALRAGEILKENGISAEIVEMATIKPIDEEIIKFVVTVEDHSLGGAVAEVIASNGLNKKLLRIG.NDVFGRSGKADELLKYYGLDGESIAKRIMEEMKK.............. : H64655
H64655         : KGAYVKHHSKDPIITLVASGSEVSLALESAKILERENIQTQVISAPCFDLLIEQDESYLKELFKG..KVLVIEASRAIEWYRFADKII.MDSFGSSAKGDKLFEKFGFSVENITAQAKRLLN............... : TKT_MYCGE
TKT_MYCGE      : KGGYILLDRKQPDLIIAASGSEVQLAIEFEKVLTKQNVKVRILSVPNITLLLKQDEKYLKSLFDANSSLITIEASSSYEWFCFKKYVKLAFSFGESDDGDKVYQQKGFNLERLMKIFTSLR................ : TKT_MYCPN
TKT_MYCPN      : KGGYIISNRKQPDVIVAASGSEVQLALQLEQALNEQQLKTRVVSVPNINMLLSQPQSYLQQLFDPNSVLLTLEASASMEWYALAKYVKLAFSFGESNDGQVVYEHKGFNVTNLLKLIKTLK................ : TKT_PICST
TKT_PICST      : KGGYTLVQQDKADIIIVATGSEVSLLSMTLKVLEGQGIKAGVVSLPDQLTFDKQSEEYKLSVLPDGVPILSVEVMSTFGWSKYSHQQFGLNRFGAPVKLQKSSSSSNSPQKVLLKELPRLLPSTRARMLCLHCVLPS : YSCTRANSK
YSCTRANSK      : KGGYVLQDVANPDIILVATGSEVSLSVEAAKTLAAKNIKARVVSLPDFFTFDKQPLEYRLSVLPDNVPIMSVEVLATTCWGKYAHQSFGIDRFGAPVRHQKSSSSSVSPQKVLLKELKRPLHSIRVT.......... : D89172
D89172         : KGGYVMLENKEADITLVGTGSEVSLCIDTVKTLETYNLKARVVSLPCWEVFEQQPESYRLSVIPDGIPAMSVEVWATNGWRRYVHEAFGMHTFGDSGPAPKLYEKFHFTTSGVAQRAKKTVDAYKDIPYIRSPVRRA : TKT2_YEAST
TKT2_YEAST     : KGGYVIHDVENPDIILVSTGSEVSISIDAAKKLYDKKIKARVVSLPDFYTFDRQSEEYRFSVLPDGVPIMSFEVLATSSWGKYAHQSFGLDEFGRSGKGPEIYKLFDFTADGVASRAEKTINYYKGKQLLSPMGRA. : KLU65983
KLU65983       : KGGYILQDVDQPDLAIVSTGSEVGIAVEAAKVLAEKNIKARIVSLPDFHSFGQQSKEYQLSVFPDGVPILSVEVLATSGWSKYAHQSFGLDRFGASGKGPAVYEKFEFTPQGIATRAEKTVEFYKGKQVISPLNTA. : XFU29134
XFU29134       : AGAYVLRESEGARAVLVATGSEVKLAAAAADLLDTAGIPTRIVSMPCRERFEALTETERAALFPKGVPVVAVEAGVTRGWRGLSGTRAIIDRFGESAPEKDLWPLFGFTPEAVADAVRRAV................ : TKT_XANFL
TKT_XANFL      : EGAYEILAASGAQASLFATGSEVSLAVEAAKLLEAQGVPTRVVSISSFELFLERPAAERAKVIGDAPAKVAVEAAIRMGWDAIVGSNAVMTSFGASAPAKELYAHFGITAQQVAARALDQLRQ.............. : TKT_RHOSH
TKT_RHOSH      : RGAYLLRDP.GRQVTLIATGSELELALAAADLLAAEGIAAAVVSAPCFELFAAQPADYRATVLGR.APRVGCEAALRQGWDLFLGPQDVMTGFGASAPAPALYQHFNITAEAIVKSAKER................. : JC4637
JC4637         : KGAYVIAEAEGRQAILMATGSEVEIALKARALLQAEAIGTRVVSMPCMELFAAQDEAYRKRILPAGGVRVAVEAAIRQPWDRWLLGERVMEGFGASAPAERLYAEFGITPEAIAAKVKSL................. : S77463
S77463         : KGAYTIVD.SEPELILIGTGSEVQLCVAAAEKLAAQGKKVRVVSMPSWELFETQDAAYKESVLPKATKRLSVEAATNFGWHKYVGTEGVIETFGASAPGGVCLEKFGFSVDNVLAKAKTLL................ : TKT2_ECOLI
TKT2_ECOLI     : RGGYVLKDSGGPDIILIATGSEMEITLQAAEKLAGEGRNVRVVSLPSTDIFDAQDEEYRESVLPSNAARVAVEAGIADYWYKYVGLKGVMTGYGESAPADKLFPFFGFTAENIVAKAHKVLGVKG............ : TKT_HAEIN
TKT_HAEIN      : RGAYVLKDCDGPELIFIATGSEVELAVQAAEALSAEGKKVRVVSMPSTNRFDKQDAAYRESVLPAATKRVAIEAGIADFWYKYVGFNGIMNSFGESAPADQLFKLFGFTVENVVAKAKEI................. : TKT1_ECOLI
TKT1_ECOLI     : RGGYVLKDCAGPELIFIATGSEVELAVAAYEKLTAEGVKARVVSMSSTDAFDKQDAAYRESVLPKATARVAVEAGIADYWYKYVGLNGVMTTFGESAPAELLFEEFGFTVDNVVAKAKEL................. : TKT_STRPN
TKT_STRPN      : KGAYVVYEMQRLIPSLIATGSEVNLAVSAAKELASQGEKSRVVSMPSTDVFDKQDAAYKEEILPNARRRVAVEMGASQNWYKYVGLDGLIDTFGASAPAPKVLAEYGFTVENLVKIVRNL................. : TKT_BACSU
TKT_BACSU      : KGAYVVSKSKNPDALLIASGSEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADKKRLAIEMGSSFGWGKYTGLEGLIDRFGASAPGETIINEYGFSVPNVVNRVKALIN............... : ESTS_DROVI

               : 544-------554-------564-------574-------584-------594-------604-------614-------624-------634-------644-------654-------664-------674---- :
OrigSeq        : KGGYVLQDVANPDIILVATGSEVSLSVEAAKTLAAKNIKARVVSLPDFFTFDKQPLEYRLSVLPDNVPIMSVEVLATTCWGKYAHQSFGIDRFGASGKAPEVFKFFGFTPEGVAERAQKTIAFYKGDKLISPLKKAF :OrigSeq
cons           : ---EEEE-----EEEEEE---HHHHHHHHHHHHHH----EEEEE----------HHHHHHHE------EEEEE--H--EEEE-----------------HHHHHH----HHHHHHHHHHHHHHH------------- :cons
dsc            : ---EEE-------EEEE----HHHHHHHHHHHHHH----EEEEE---HHHHHHHHHHHHHEE------EEEEE--HHHHHHHH--------HH------HHHHHH-----HHHHHHHHHHHHH-------------- :dsc
mul            : ---EEEE------EEEE-----HHHHHHHHHHHHHH--HEEEEEE--HHHHHHH----HHH-------EEEEHHHH-------------E----------HHEHH-----HHHHHHHHHH----------------- :mul
nnssp          : ---EEEE------EEEEE---HHHHHHHHHHHHHH----EEEEE------------------------EEEE--------------------------HHHHHHH----HHHHHHHHHHHHHH-------------- :nnssp
phd            : ---EEEEE----EEEEEE--HHHHHHHHHHHHHHHH---EEEEEE---------HHHHHHHE------EEEEEEEE--EEEE----E-EEE--------HHHHHHH---HHHHHHHHHHHHHHH----EEE------ :phd
pred           : ---EEE------EEEEEE---HHHHHHHHHHHHHH---EEEEEE-------HHHHHHHHHH--------HHHHHHH-------------------------EEE-----HHHHHHHHHHHHHHH------------- :pred
zpred          : --EEEEE-----EEEEEEHHHHHHHHHHHHHHHHHHHHHEEEEEEE-HHHHHHHHHHHHEEEE-----EEEEHHHHH-----------EEEEE------HHHEE-----HHHHHHHHHHH----------------- :zpred


access         : EEB-BBBE-EEBEBBBBBEBEEBBBBBEBBEEBEEEEBEB-BBBBBBBEBBEEEEEEBEBEBBEEEBBEBBBEBBBEBBBBEBBBBEBBBEBBEEEBEBEEBBEEBEB-BEBBBEEBEEBBEB-EBEEBBBEB-EEE : access

PHD Rel        : 99288961689707997377356787999999998088279998246311134416545411368875289987421212111011101323366876143234513238999999999999737862212246799 : PHD Rel
Pred Rel       : 00755567999980009670677799999999999696588006877655550666877767899965577776565666556788776777789999975755059966780999999998756996578898000 : Predator Rel


dssp           : ---EEEE------EEEEE--HHHHHHHHHHHHHHH----EEEEE--EHHHHHH--HHHHHHH------EEEE-------HHH---EEE----------HHHHHHHH---HHHHHHHHHHHHHHH------------- :dssp
define         : H------------EEEEEEE-HHHHHHHHHHHHHHHEEEEEEEEEEHHHHHHHHHHHHHHHHH---EEEEEEEE-----------------EEEEEEHHHHHHHHHH-HHHHHHHHHHHHHHHHHEEEEE---EEEE :define
stride         : ---EEEE------EEEEE--HHHHHHHHHHHHHHHH---EEEEE--EHHHHHH--HHHHHHH------EEEE-------------EEE----------HHHHHHHH---HHHHHHHHHHHHHHH------------- :stride


Q3 values for 1trkb-3-AS  View SS in Rasmol

	dssp	define	stride
phd	78.10	59.85	78.83
dsc	83.21	62.77	80.29
pred	75.18	59.12	76.64
mul	76.64	59.85	79.56
nnssp	83.21	59.85	84.67
zpred	69.34	60.58	72.26
cons	83.94	61.31	83.21