Results for 1tupc-1-AUTO.1


1tupc-1-AUTO.1    : SSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENL : MMU59757
MMU59757          : ..............................ARISSLNKLFCQLAKTCPVQLWVSATPPAGSRVRAMAIYKKSQHMTEVVRRCPHHERCSDGDGLAPPQHLIRVEGNLYPEYLEDRQTFRHSVVVPYEPPEAGSEYTTIHYKYMCNSSCMGGMNRRPILTIITLDP.............................. : HSP53005
HSP53005          : SSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYICNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENL : MNU48618
MNU48618          : .............GFHLGFLQSGTAKSVMCTYSPSLNKLFCQLAKTCPVQLWVSDTPPAGSRVRAMAIYKKSQHMTEVVRRCPHHERCTDGDGLAPPQHLIRVEGNLNAEYLDDKQTFRHSVVVPYEPPEVGSDYTTIHYKYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRDSFEVRICACPGRDRRTEEENF : CFU62133
CFU62133          : SSVPSPKTYPGTYGFRLGFLHSGTAKSVTWT.SPLLNKLFCQLAKTCPVQLWVSSPPPPNTCVRAMAIYKKSEFVTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRAKYLDDRNTFRHSVVVPYEPPEVGSDYTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNVLGRNSFEVRVCACPGRDRRTEEENF : P53_XENLA
P53_XENLA         : CAVPSTDDYAGKYGLQLDFQQNGTAKSVTCTYSPELNKLFCQLAKTCPLLVRVESPPPRGSILRATAVYKKSEHVAEVVKRCPHHERSVEPEDAAPPSHLMRVEGNLQAYYMEDVNSGRHSVCVPYEGPQVGTECTTVLYNYMCNSSCMGGMNRRPILTIITLETPQGLLLGRRCFEVRVCACPGRDRRTEEDNY : LFU43596
LFU43596          : PSVPSNIKYPGEYVFEMSFAQSKETKSTTWTYSEKLDKLYVRMATTCPVRFKTARPPPSGCQIRAMPIYMKPEHVQEVVKRCPNHATAKEHEKHPAPLHIVRCEHK.LAKYHEDKYSGRQSVLIPHEMPQAGSEWVVNLYQFMCLGSCVGGPNRRPIQLVFTLEK.DNQVLGRRAVEVRICACPGRDRKADEKAS : P53_CHICK
P53_CHICK         : PVVPSTEDYGGDFDFRVGFVEAGTAKSVTCTYSPVLNKVYCRLAKPCPVQVRVGVAPPPGSSLRAVAVYKKSEHVAEVVRRCPHHERCGGGDGLAPAQHLIRVEGNPQARYHDDETTKRHSVVVPYEPPEVGSDCTTVLYNFMCNSSCMGGMNRRPILTILTLEGPGGQLLGRRCFEVRVCACPGRDRKIEEENF : OLU57306
OLU57306          : TTVPVTTDYPGSYELELRFQKSGTAKSVTSTYSETLNKLYCQLAKTSPIEVRVSKEPPKGAILRATAVYKKTEHVADVVRRCPHHQNE..D.SVEHRSHLIRVEGSQLAQYFEDPYTKRQSVTVPYEPPQPGSEMTTILLSYMCNSSCMGGMNRRPILTILTLET.EGLVLGRRCFEVRICACPGRDRKTEEESR : PFP53PROT
PFP53PROT         : STVPVVTDYPGEYGFQLRFQKSGTAKSVTSTFSELLKKLYCQLAKTSPVEVLLSKEPPQGAVLRATAVYKKTEHVADVVRRCPHHQTE..D.TAEHRSHLIRLEGSQRALYFEDPHTKRQSVTVPYEPPQLGSETTAILLSFMCNSSCMGGMNRRQILTILTLETPDGLVLGRRCFEVRVCACPGRDRKTDEESS : P53_SALIR
P53_SALIR         : STVPTTSDYPGALGFQLRFLQSSTAKSVTCTYSPDLNKLFCQLAKTCPVQIVVDHPPPPGAVVRALAIYKKLSDVADVVRRCPHHQSTSENEGPAPRGHLVRVEGNQRSEYMEDGNTLRHSVLVPYEPPQVGSECTTVLYNFMCNSSCMGGMNRRPILTIITLETQEGQLLGRRSFEVRVCACPGRDRKTEEINL : DRU60804
DRU60804          : STVPETSDYPGDHGFRLRFPQSGTAKSVTCTYSPDLNKLFCQLAKTCPVQMVVDVAPPQGSVVRATAIYKKSEHVAEVVRRCPHHERTPDGDNLAPAGHLIRVEGNQRANYREDNITLRHSVFVPYEAPQLGAEWTTVLLNYMCNSSCMGGMNRRPILTIITLETQEGQLLGRRSFEVRVCACPGRDRKTEESNF : D89172

                  : 95--------105-------115-------125-------135-------145-------155-------165-------175-------185-------195-------205-------215-------225-------235-------245-------255-------265-------275-------285-- :
OrigSeq           : SSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENL :OrigSeq
cons              : -------------EEEEEEE------EEEEEE---HHHHHHHHH----EEEEEE-------EEEEEEEE-----HHHHHHH-----------------EEEEE-----EEE-------EEEEEEE---------EEEEEEEEEE------------EEEEEEE------------EEEEEEE------------- :cons
dsc               : ------------EEEEEEEE------EEEEE----HHHHHH-------EEEEE--------EEEEEEE-------HHHHH-------------------EEEE-----EEE--------EEEEEE----------EEEEEEEEE------------EEEEEEE-------------EEEEEE------------- :dsc
mul               : --------------EEEEH--------EEEE------HHHHHHH----EEEEE--------HHHHHHHHHHHHHHHHHHHH-----------------EEEHHH-----HH--------EEEEE-----------EEEEEEE--------------EEEEEEH------EE-----EEEEEE--------HH--- :mul
nnssp             : -------------EEEEEE-------EEEEEE------EE--------EEEEE--------EEEEEEEE---HHHHHHHHH-----------------EEEEE------EE--------EEEEEE-----------EEEE----------------EEEEEEE------------EEEEEEE------------- :nnssp
phd               : -------------EEEEEEE------EEEEEE---HHHHHHHHH----EEEEEE-------EEEEEEEEE----HHHHHHH-----------------EEEEEE----EEEE---EEEEEEEEE----------EEEEEEEEEE------------EEEEEEEE-----EEE--EEEEEEE-------------- :phd
pred              : ---------------EEEEE----EEEEEEE----HHHHHHHHHHH--EEEEEE-------HHHHHHHHHHHHHHHHHHHH-----------------EEEEE---------------EEEEEE----------EEEEEEE---------------EEEEEE-------------EEEEEEE-----HHHHH--- :pred
zpred             : ---------------------------EEEEE----HHHHHHH---EEEEEEE-------EEEEHHHHHHHHHHHHHHHHHE--------------HHEEEEEE-----EEEHH-----EEEEEEEEE----HEEEEEEEE----------EEEEEEEEEEEEE------------------------------- :zpred


access            : EEBEBBEE-EEE-BBEB-BBEEEEBEEBBBBBBEEBBEBBBEBBEEBEBEBBBEEEEEEEBBB-BBBBBEEBEEBBEBBEEBEEEEEBEEEEEBEBEEBBBEBEBEB-BEBBEEEEEBEBBBBBBEE-EEBEEEBBBBBBBBBBBBBBBEE-E--BBBBBBBBEEEEEEBBBEEBBEBBBBBBEEEEEEEEEEEE : access

PHD Rel           : 999887689863116787633788724546615544799999762797389961689986323544322112325667541676678899999989881789623432315136614157998327699889861689997643343469969732699997446898433143159998616898985335699 : PHD Rel
Pred Rel          : 008880899999655555566997666666676777709999895898509006800090856677878877889977980999999999999988975890569775755779908706886770009998906566966667999999999875080090579987655666558800970990757777000 : Predator Rel


dssp              : --------E-HHH--EEEE-----------EEE----EEEEE----EEEEEE---------EEEEEEEE--HHHH-------HHHH--------------EEE------EEEE------EEEEEE----------EEEEEEE--------------EEEEEEEE-----EEEEEEEEEEEE--HHHHHHHH---- :dssp
define            : -EEEE-EEEE---EEEEEEEEEE-----EEEEE---EEEEE---EEEEEEEEEE-------EEEEEEEE------EEEE--HHHHHH------------EEEEEE--EEEEEEE---EEEEEEEEEEEE-----EEEEEEEEE-----------EEEEEEEEE-----EEEE---EEEEEEE-HHHHHHHHHHHH :define
stride            : --------E------EEEE-----------EEE----EEEEE--EEEEEEEE---------EEEEEEEE--HHH---------HHH--------------EEE------EEEE------EEEEEE----------EEEEEEE--------------EEEEEEEE-----EEEEEEEEEEEE--HHHHHHHHH--- :stride


Q3 values for 1tupc-1-AUTO.1  View SS in Rasmol

	dssp	define	stride
phd	68.21	63.08	68.21
dsc	69.23	63.08	69.74
pred	63.08	53.85	65.13
mul	65.64	52.31	66.67
nnssp	73.85	61.54	73.85
zpred	60.00	50.77	60.00
cons	67.69	63.59	67.69