Results for 1ubq


1ubq         : MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG : DDIUBIQC
DDIUBIQC     : .QIFIKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG : ATTS0634
ATTS0634     : MQXSXKTLTGKXITLEVESPDTIDNVKXKXQDKEGIPPDQQRLXFAGKQLEDGRXLADYNIQKESTLHLXLRLXGG : S29238
S29238       : MQIFVKTLTGKTITLEVEPNDSIDAIKAKIQEKEGIPPDQQRLIFAGKQLEEGKTLSDYNIQKESTLHLVLRLRGG : DDUBIQ
DDUBIQ       : MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG : DDUBIR
DDUBIR       : ............ITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG : SYNYSCUB
SYNYSCUB     : MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG : SSC25G11
SSC25G11     : MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLXDYNIQKESTLHLVLRXXGG : UBIL_NPVOP
UBIL_NPVOP   : MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG : CEF45H111
CEF45H111    : MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG : UBIL_HUMAN
UBIL_HUMAN   : MQLTVKALQGRECSLQVPEDELVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDYSIGPNSKLNLVVKPLEV : UBIL_CAEEL
UBIL_CAEEL   : .MVFVKTLH.RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED....SDCGIDSEATIYVNLELLGG : R23B_HUMAN
R23B_HUMAN   : MQVTLKTLQQ..FKIDIDPEETVKALKEKIESEKGFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPKA : CGU41499
CGU41499     : MQLFVRAQG..LHTLEVTGQETVAQIKAHVASLEGISPEDQ.VLLAGSPLEDEATLGQCG.VEALTTLEVAGR... : R23A_MOUSE
R23A_MOUSE   : VTITLKTLQQ..FKIRMEPDETVKVLKEKIEAEKGFPVAGQKLIYAGKILSDDVPIRDYHIDEKNFVVVMVTKAKA : JN0674
JN0674       : MELFIETLTGTCFELRVSPYETVTSVKSKIQRLEGIPVAQQHLIWNNMELEDECSLSDYNISEGCTLKMVLAMRGG : TVU27577
TVU27577     : MQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLVLRLRGG : DSK2_YEAST
DSK2_YEAST   : LNIHIKSGQD.KWEVNVAPESTVLQFKEAINKANGIPVANQRLIYSGKILKDDQTVESYHIQDGHSVHLVKSQPKT : S62740
S62740       : ..IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG : S51867
S51867       : MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG : TPUBIEXTA1
TPUBIEXTA1   : MQIFVQTLAGKTITLDVTSSNTINDIKSMISDKESIPPDELRFIFAGKFLEEERTLSDLNIQKENTLHLVLIRVSM : CELC26F14
CELC26F14    : MQIFLLGLDNTTHTLDVDASTTLSAIKGVIGAGEEFS.....ISYGSKVLSEELTLGECQ.IESLSTLSVNGR... : BAT3_HUMAN
BAT3_HUMAN   : LEVLVKTLDSQTRTFIVGAQMNVKEFKEHIRASVSIPSEKQRLIYQGRVLQDDKKLQEYN.VGGKVIHLVERAPPT : YAUG_SCHPO
YAUG_SCHPO   : ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYKIQDGHSIHLVKTLGQ. : SPAC6G97
SPAC6G97     : IPIAIRWQGK.KYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATLLMMGTAGET : RA23_YEAST
RA23_YEAST   : VSLTFKNFKKEKVPLDLEPSNTILETKTKLAQSIS.CEESQKLIYSGKVLQDSKTVSECGLKDGDQVVFMVSQKKS : CEZK203
CEZK203      : LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGYAPELQKLIYNGKILDDSVKVGEVGFDSSKFVVVMLSKRK. : DCRAD23II
DCRAD23II    : MKLTVKTLKG..FEIRAQPNDTVMAIKKNIEDLQGYPCGQQLLIHNGKVLKDESTLAESKISEDGFLVVMLGKSKT : DCRAD23I
DCRAD23I     : MKIYVKTLKG..FEIQVNPDDSVADVKRSIETAQGYPAAQQMLIYQGKVLKDGTTLLENNVAENSFIVIMLSKSKS : OSU63530
OSU63530     : MKISVKTLKG..FQIEVDSAQKVADVKRIIETTQGYPAEQQMLIHQGKVLKDDTTLDENKVLENSFLVIMLRQ... : HSSMT3C
HSSMT3C      : EYIKLKVIGQSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTG. : S60735
S60735       : IKVQVPNMQDKLGQVLVFTLPLVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVIHLALKERG. : S50096
S50096       : LNVHLPQAPEGSVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYLQVKERG. : CELC16C88
CELC16C88    : QDVPIETEKSPFFEILVIWTDSVVPGNHGKLRVCGRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIR.. : CELC16C87
CELC16C87    : HDVPIETGELSFFYIFVYWSDSLASGNYRNLWVRGRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQ.. : CELC16C810
CELC16C810   : QDVPLGTVELPFFEILVIWTESFASENHWKLRVCGRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQ.. : INI1_HUMAN
INI1_HUMAN   : .....QGLG.PGSTVLLVVDKCDEPLSILVRNNKGRSSTYERLTQTVAHLKQQVS.GLEGVQDDLFWLTFEGKPLG : S26434
S26434       : ....SLGLG.PSSTVMLVVQNCSEPLSILVRNERGHSNIYEFLTQTVDTLKKKVSSGTS..HEDQFWLSFEGRPMG : CELC16C812
CELC16C812   : FQIFVKVLG..VYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTITMYFRSG.. : CELC16C85
CELC16C85    : VETCTKVVDLSMFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADYKWDTSVELLVRAS.... : S70007

             : 1---------11--------21--------31--------41--------51--------61--------71---- :
OrigSeq      : MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG :OrigSeq
cons         : -EEEEE-----EEEEEE----HHHHHHHHHHHH--------EEEE--------------------EEEEEEE---- :cons
dsc          : -EEEEE------EEEEE-----HHHHHHH-------------EE---------------------EEEEEEE---- :dsc
mul          : EEEEEH------EEEEE-----HHHHHHHHH----------EEEE---H----------------HHHHHHH---- :mul
nnssp        : EEEEEE-----EEEEEEE----HHHHHHHHHH---------EEEE--------------------EEEEEEE---- :nnssp
phd          : -EEEEE-----EEEEEE----HHHHHHHHHHHH--------EEEE--------------------EEEEEEE---- :phd
pred         : -----------EEEEEE----HHHHHHHHHHHH-------HHHHH---------------------HHHHHHH--- :pred
zpred        : HHEEEE------EEEEEHHHHHHHHHHHHHH--------HEEEEE---HHHHH--HHH---HHHHHHHEEEE---- :zpred

access       : EEBBBEBBEEEEBEBEBEBEEBBEEBEEEBEEEEEBEEEEEEBBBBBEEBEEEEEBBEBEBEEEBBBBBBBEEEEE : access

PHD Rel      : 9699982568627986158312689998775545899523155552634347852254321235259987751699 : PHD Rel
Pred Rel     : 0066675777755888688776778999998787998775576777876777776566667877757776776000 : Predator Rel

dssp         : -EEEEEE----EEEEE-----EHHHHHHHHHHHH---HHHEEEEE--EE-----E-HHH------EEEEEE----- :dssp
define       : EEEEEEE--EEEEEEE-----HHHHHHHHHHHHH-----EEEEE--EEEE----HHHHHH----EEEEEEEEEEEE :define
stride       : -EEEEE-----EEEEE-----EHHHHHHHHHHHH---HHHEEEEE--EE-----EHHHH------EEEEEE----- :stride

Q3 values for 1ubq  View SS in Rasmol

	dssp	define	stride
phd	80.26	68.42	80.26
dsc	71.05	60.53	71.05
pred	59.21	48.68	59.21
mul	65.79	53.95	65.79
nnssp	76.32	65.79	76.32
zpred	57.89	51.32	60.53
cons	80.26	68.42	80.26