Results for 1udh-1-AUTO.1


1udh-1-AUTO.1    : LDWTTFRRVFLIDDAWRPLMEPELANPLTAHLLAEYNRRCQTEEVLPPREDVFSWTRYCTPDEVRVVIIGQDPYHHPGQAHGLAFSVRANVPPPPSLRNVLAAVKNCYPEARMSGHGCLEKWARDGVLLLNTTLTVKRGAAASHSRIGWDRFVGGVIRRLAARRPGLVFMLWGTHAQNAIRPDPRVHCVLKFSHPSPLSKVPFGTCQHFLVANRYLETRSISPIDWSV : MM08975
MM08975          : LRLAARNVPAGFGESWKQQLCGE.FGKPYFVKLMGFVAEENHHKVYPPPEQVFTWTQMCDIRDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLENIFKELSTDID.FVHPGHGDLSGWARQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNLSGLVFLLWGSYAQKKGSVIRKRHHVLQTAHPSPLSVY.FLGCRHFSKANELLQKSGKKPINWKE : UNG_HSV23
UNG_HSV23        : CLGAAFRRAFLIDDAWRPLLEPELANPLTARLLAEYDRRCQTEEVLPPREDVFSWTRYCTPDDVRVVIIGQDPYHHPGQAHGLAFSVRADVPVPPSLRNVLAAVKNCYPDARMSGRGCLEKWARDGVLLLNTTLTVKRGAAASTSKLGWDRFVGGVVRRLAARRPGLVFMLWGAHAQNAIRPDPRQHYVLKFSHPSPLSKVPFGTCQHFLAANRYLETRDIMPITVV. : UNG_MYCGE
UNG_MYCGE        : MDDLFQRMVSCVLPSWRAFIDEE.VKKPYFQALLEKLKAL.KATIIPKPELIFRVFSFFKPIDTKVIIFGQDPYPSPNDACGLAFASNN..SKTPSLKRIILRLEKEYPLKSSWQQNFLLNWAEQGVLLLNGILTTTVFIRNAHKNWGWEEFNCNLLTFLKNQNIKLVFLGVQTKNFVVKSIGVDGFEHLSYPHPSPLSGNLFLTNDLFKTINNWLKQHNQKIINWAV : UNG_HSV6U
UNG_HSV6U        : LSIDDQHSLFGINRDWLSFLQLSKLEITHLKHVYKLVDND.HLMVHPSSDNVHAWSFLCKPDNVKVVILGQDPYPD.GRGCGLAFGTVKECSIPESLKNIFKELERSVPNFSPPDNGCLNSWCSEGVLLLNSIFTVVHGLPMSHEAFGWQTLSYKIISKLSVEMDSLVFLLWGNHARKLSYLIARKHLVLESAHPSPKVK.PFIGCNHFVRANLFLTEHGKDPINWNI : HPU238573
HPU238573        : K.....GENLLLPDPWLNFLQLSPIFQRKLAAILACIRRL.QATIYPEEDMCMAWARFCDPSDIKVVILGQDPYHG.GQANGLAFSVAYGFPVPPSLRNIYAELHRSLPEFSPPDHGCLDAWASQGVLLLNTILTVQKGKPGSHADIGWAWFTDHIIALLSERLKACVFMLWGAKAGDKASLISKKHLVLTSQHPSPLAQNKFVGNNHFVLANNFLREKGLGEIDWRL : ILTVULGNS4
ILTVULGNS4       : PEWTDVAIEFSIPSSWESILKPLIENEDFGETLLQYSYCSRFRKIFPPKGDIFAWTRYCNPQDVRVIIVGQDPYPTEGHAHGLAFSVPRGCRIPPSLRRILEALRDCYPSIPKETHGCLESWARKGVLLLNKYLTVEQGFPRSHSTIGWDKFTKGVISSLLEKLSSTVLMLWGQEARRFIPRVPKNHLKLEFIHPSTCTRRPFN.CRHFEEANQYFESKGLSPIDWNL : UNG_PRVKA
UNG_PRVKA        : PTWDAFAAEFDVAPSWRALLEPEIAKPYARLLLAEYRGRCLTEEVLPAREDVFAWTRLTAPEDVKVVIIGQDPYHGPGQAHGLAFSVRRGVPIPPSLANIFAAVRATYPTLPAPAHGCLEAWARRGVLLLNTTLTVRRGVPGSHAPLGWARLVRAVVQRLCETRPKLVFMLWGAHAQKACAPDPRRHKVLTFSHPSPLARTPFRTCPHFGEANAYLVQTGRAPVDWSV : S73922
S73922           : MEQLLDQFLSGVLSEWKAFILQE.AKQTYFQELLAKLKNV.EQELTPKASQVFRPFSFFAPNNTKLIIYGQDPYPNPQHACGLSFASNA..PKLPSLKRMILRLQQEYPLANHWTKQLLEGWAQQGILLLNGVFTTNAFQTNAHRNWGWEQFNCHLLDFLLSQKLYLVFLGKQTENFVLKKIGASQFASLSYPHPSPLTGRKFFDDALFKQINQWLKHHNHTPIDWTN : GHU049942
GHU049942        : QPWDIIANAYNIHENWKQLLLPELCCLRGSEILAEYERRAITEEVYPPKMDIFAWTRYCAPESVKAVIVGQDPYANPGQAHGLAFSVKQGVAIPPSLKNILLAVKACYPSADLGNHGCLEAWSKRGVLLLNSVLTVKRGDPGSHHSVGWQFFIRNILRRLSSTTRGIVFMLWGAQRQTMYFQTDDRHLVLKYSHPSPLSRKPFATCTHFKEANDFLSKIGRGCIDWSL : UNG_VZVD
UNG_VZVD         : LDSVEVFSKFNISPEWYDLLSDELKEPYAKGIFLEYNRLLSGEEILPSTGDIFAWTRFCGPQSIRVVIIGQDPYPTAGHAHGLAFSVKRGITPPSSLKNIFAALMESYPNMTPPTHGCLESWARQGVLLLNTTLTVRRGTPGSHVYLGWGRLVQRVLQRLCENRTGLVFMLWGAHAQKTTQPNSRCHLVLTHAHPSPLSRVPFRNCRHFVQANEYFTRKGEPEIDWSV : UNG_HSVEB
UNG_HSVEB        : SSWEDVEREFNIAPSWRPILEREMQQPYVRLLLNEYKLRCASEEVFPPKEDIFAWTRFSPPEKVRVVIVGQDPYHAPGQAHGLAFSVRKGVPVPPSLRNIYSAVQKSYPSFRHPMHGFLERWAEQGVLLINTTLTVARGKPGSHATLGWHRLVRAVIDRLCTTSQGLVFMLWGAHAQKSCSPNRQHHLVLTYGHPSPLSRVNFRDCPHFLEANAYLTKTGRKPVDWQI : UNG_HSVBC
UNG_HSVBC        : .........................MPYTRHALREYERRSRVEQVLPPKADIFAWTRYAAPEDIKVVILGQDPYHSRGQAHGLAFSVNRGVPVPPSLQNIYAAVQKNFPGAPRPSHGCLEDWARRGVLLLNTSLTVRSGAPGSHSSLGWGRLVHAVLARLSAESGPLVFMLWGAHAQRAFGAAGKRHLVLTYSHPSPLSRAPFVHCTHFAEANAFLEQHGRGGVDWSI : UNG_HCMVA
UNG_HCMVA        : LTPDEQARVFCLSADWIRFLSLPDHDTVLLRDTVAAVEGA.LEMVYPAPEHVHRWSYLCPPEQVRVVIVGQDPYCD.GSASGLAFGTLAGRPPPPSLNNVFRELARTVDGFQRPASGCLDAWARRGVLLLNTVFTVVHGQPGSHRHLGWQTLSNHVIRRLSERREHLVFMLWGADAHTCEYLIRRRHLVLKSCHPSPRN..AFVGNDHFILANAYLDTHYRETMDWRL : UNG_HSV7J
UNG_HSV7J        : MSLEEQHETFQINVKWLKFLNLSDSDIVQLQNVYKLVQRD.RLIIYPDPQNVHSWSYLCSPEEIKVIIVGQDPYPD.GRGHGLAFSTVRGCSPPNSLKTIFAELERTIENFKAPAHGSLKSWCAQGVLLLNTVFTVIRGVPMSHEAIGWQVLSNRIINQLSEKMQNLVFMLWGSQARKLVSLISKKHLILECAHPSPRTK.PFIGCGHFLKANKYLQIHNKCPIDWNI : HSEUNGS1
HSEUNGS1         : CVVSDA..ELMLAPSWITFLDLSPFLKQKLANLLREINNM.QATIYPPQDKIMYWSSCCSPDNVKVVILGQDPYHG.GQATGLAFSVDHGVQIPPSLKNIFSELYRGHNGHSMPVNGCLDGWARQGVLLLNSILTVERGRASSHNSLGWQWFTNYILTVLSEKSRYCVFLLWGSKAIDKGNLISKHHLVLKAQHPSPLSVCAFFGCDHFRKANDYLIAHDRSPIDWWK : KSU7569847
KSU7569847       : QGVDDR..DLLLAPKWISFLSLSSFLKQKLLSLLRQIREL.TTTVYPPQDKLMWWSHCCDPEDIKVVILGQDPYHK.GQATGLAFSVDPQCQVPPSLRSIFRELEASVPNFSTPSHGCLDSWARQGVLLLNTVLTVEKGRAGSHEGLGWDWFTSFIISSISSKLEHCVFLLWGRKAIDRTPLIAQKHLVLTAQHPSPLASLRFQGCNHFNLANDYLTRHRRETVDWGL : UNG_HSVSA
UNG_HSVSA        : ITSDD...CLLLSTDWVEFLQMSQFLKQKLLQLLNCIKEK.KAVIYPPDNKIMFWSYCCAPRDIKVVILGQDPYHG.GQGTGLAFSVSYEHSIPPSLKNIFFELQRSDPLFHAPNHGCLNSWATQGVLLLNTVLTVEKGKAYSHSDLGWQWFTNYIISSVSEKLSNCVFMLWGTKAIEKSILISSKHLVLKAQHPSPLAAAKFIGCDHFNQANKYLEEHKKKPISWAL : MH68REPR3
MH68REPR3        : S......VMDFLPQSWIDYLQLSAFSSKKLEQIMAAVENR.QNIVYPDSEDVMRWAFSCPPENVRVVILGQDPYHG.GQANGLAFSVHENFPVPPSLHNIFQELKRSVPDFQIPPSGCLDKWAEQGVLLLNCILTVDKGRPGSHHKLGWGWFTDYVISTISEKNDKCVFMLWGNKAIEKEVLIGSKHLVLKAQHPSPLASLPFLGCNHFSIANTYLTQHNKPSISWNL : UNG_HSVE2
UNG_HSVE2        : QEHLL.DEKIPINRAWMDFLQMSPFLKRKLVTLLETVAKL.STVVYPGEERVFSWSWLCEPTQVKVIILGQDPYHG.GQATGLAFSVSKTDPVPPSLRNIFLEVSACDSQFAVPLHGCLNNWARQGVLLLNTILTVEKGKPGSHSDLGWIWFTNYIISCLSNELDHCVFMLWGSKAIEKASLITNKHLVLKSQHPSPLAARKFLGCGHFKQANEYLELHGKCPVDWNL : UNG_ECOLI
UNG_ECOLI        : ..........ANELTWHDVLAEE.KQQPYFLNTLQTVASESGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIP.FTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIKQRHHVLKAPHPSPLSAH.FFGCNHFVLANQWLEQRGETPIDWMP : UNG_HAEIN
UNG_HAEIN        : ............MKNWTDVIGTE.KAQPYFQHTLQQVHLASGKTIYPPQEDVFNAFKYTAFEDVKVVILGQDPYHGPNQAHGLAFSVKPEVAIPPSLLNIYKELTQDIS.FQMPSNGYLVKWAEQGVLLLNTVLTVERGMAHSHANLGWERFTDKVIAVLNEHREKLVFLLWGSHAQKKGQMIRTRHLVLTAPHPSPLSAH.FFGCRHFSKTNSYLESHGIKPIDWQI : UNG_BACSU
UNG_BACSU        : ........MKQLLQDSWWNQLKE.EFEKPYYQELREMLKRAEQTIYPDSRDIFNALHYTSYDDVKVVILGQDPYHGPGQAQGLSFSVKPGVKQPPSLKNIFLELQQDIG.CSIPNHGSLVSWAKQGVLLLNTVLTVRRGQANSHKGKGWERLTDRIIDVLSERERPVIFILWGRHAQMKKERITSKHFIIESTHPSPFSAR.FFGSRPFSRANAYLEKMGEAPIDWCI : UNG_PSEDE
UNG_PSEDE        : ......................E.FASAYMADLKQFLVAQEGRQIFPRGPEYFRALDLTPLDKVRVVILGQDPYHGDGQAHGLCFSVRPGVRTPPSLVNIYKELNTDLG.IPPARHGFLESWARQGVLLLNSVLTVRARERASHQGHGWEKFTDAIIRAVNEAEHPVVFMLWGSYAQKKAAFVRSRHLVLRAPHPSPLSAH.FLGCRHFSQANAFLESKGFDPIDWRL : UNG_DICDI
UNG_DICDI        : NNYYDDIENYFTDKQWKEALSGE.FGKAYFKKMITQLNKRKEKPIYPPKNEIFSAFNYAHLEDVKVVIIGQDPYHGKGQAHGLSFSVKKGVSPPPSLINIYKELETDIEFKRPLKNGFLEPWARQGVFLLNAVLTVEEATPNSHKDFGWADFTDAVLKILSKQDQPIVFILWGGFAQKKEKLFNKNHLVLKSGHPSPLSIK.FIGCKHFSKSNEFLKSKGIEEIDWKI : UNG_STRPN
UNG_STRPN        : ..........MEHSSWHALIKAQ.LPEGYFGKINQFMEQV.QGIIYPPKEKVFQALLTTLLEEVKVVILGQDPYHGPGQAQGLSFSVPDSIPAPPSLQNILKELSDDIG...VKKSHDLTAWAEQGVLLLNACLTVPAGQANGHAGQIWEPFTDAVIQVVNHLDRPVVFVLWGAYARKKKALVNPHHLIIESAHPSPLSVY.FWGSKPFSKANTFLKETGQEPIDWLR : UNG_YEAST
UNG_YEAST        : LRTLLSLELETIDDSWFPHLMDE.FKKPYFVKLKQFVTKE.DHTVFPPAKDIYSWTRLTPFNKVKVVIIGQDPYHNFNQAHGLAFSVKPPTPAPPSLKNIYKELKQEYPFVEDNKVGDLTHWASQGVLLLNTSLTVRAHNANSHSKHGWETFTKRVVQLLIQDREALVFLLWGNNAIKLVESLYPNIMVMKSVHPSPLSAS.FFGTNHFKMINDWLYNTGEKMIDWSV : MTCY34910
MTCY34910        : ....MTARPLSELVERGWAAALE.PVADQVAHMGQFLRAEAGRRYLPAGSNVLRAFTF.PFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPSLANIFDEYTADLG.YPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAGNCVAIESPHPSPLSAS.FFGSRPFSRANELLVGMGAEPIDWRL : DCRAD23I

                 : 17--------27--------37--------47--------57--------67--------77--------87--------97--------107-------117-------127-------137-------147-------157-------167-------177-------187-------197-------207-------217-------227-------237----- :
OrigSeq          : LDWTTFRRVFLIDDAWRPLMEPELANPLTAHLLAEYNRRCQTEEVLPPREDVFSWTRYCTPDEVRVVIIGQDPYHHPGQAHGLAFSVRANVPPPPSLRNVLAAVKNCYPEARMSGHGCLEKWARDGVLLLNTTLTVKRGAAASHSRIGWDRFVGGVIRRLAARRPGLVFMLWGTHAQNAIRPDPRVHCVLKFSHPSPLSKVPFGTCQHFLVANRYLETRSISPIDWSV :OrigSeq
cons             : ---HHHHHHH---HHHHHHH------HHHHHHHHHHHHHH------------EEEEE------EEEEEE-------------EEEEE---------HHHHHHHHHH------------HHHHHH--EEEEHHEEEEEE----------HHHHHHHHHHHHHH----EEEEEE--------------EEEEE----------------HHHHHHHHHHHH--------- :cons
dsc              : ---HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHH------EEEEEE-------------EEEEE---------HHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHEEE---------------HHHHHHHHHHHHHH--------- :dsc
mul              : --------H-------HHHHHHH-H-HHHHHHHHHHHHHH-HH--------EEHE--------EEEEEE--------------EE------------HHHHHHHHH------------HHHH--HHEEEE-EEEEE--------------HHHHHHHHHH------HHHHHHHHHH-HHHHH----HEEEE--------------------H-HHHH----------- :mul
nnssp            : --HHHHHHHH-----HHHHH------HHHHHHHHHHHHH------------EE-----------EEEEE--------------EEE----------HHHHHHHHHH------------HHHHH---EEEE--EEE--------------HHHHHHHHHHHH-----EEEEEE---------------EEEE-----------------HHHHHHHHH----------E :nnssp
phd              : -------------HHHHHHH-------HHHHHHHHHHHHH----E-------EEEEEE-----EEEEEE------------EEEEEE-------HHHHHHHHHHHHH------------HHHHH--EEEEEEEEEEEE----------HHHHHHHHHHHHHHH---EEEEEE--------------EEEEE----------------HHHHHHHHHHHH--------- :phd
pred             : ---HHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH---------EEEEEE------EEEEEE-------------EEEEE---------HHHHHHHHHH------------HHHHHH-HHHHHHHEEEEE--------------HHHHHHHHHHH----EEEEEE---HHHHHH------EEEEE-----------------HHHHHHHHH---------- :pred
zpred            : -------------------------HHHHHHHHHHHHHH-----EE-----EEE--------HHEEEEEEEEE-----EEEEEEEEE--------EEEEEEEHH-----------------HHHHEEEEEEEEEEEE------------------EEEEHH----EEEEEHHHHHHH-----HHHHHEEEE------------------HHHHHHHH-------EEE- :zpred


access           : EE-EEBBBBBBBBEEBBEBBEEEBBEEEBBBBBBEBBEE-EEEEB-EEEEEBBBBB-BB-EEEBEBBBBBEEE-EEEE-BEBBBBBBEEEBE-EEEBEEBBEEBEEEBEEBE-EEEEBB-EBBEEBBBBBBBBBBBEEB-EEEEEEBBBE-BBEBBBBBBBEE-EBBBBBBBB-EBEEEBBBBBEEBBBBEBE-EEEBBBBEBBBBEBBBEBEEBBEEEEEE-BEBEE : access

PHD Rel          : 997644433344314777531223541578999999996414521389533215422047764399997127988998743246774588999924599999999726668888665311565143477842368862577665556447788999999996357558998424444445221243368835799876765644551445878999974687564469 : PHD Rel
Pred Rel         : 006677776670877688858766568888899999988886550899088677666789998000000090999999987756676888909907688999988558999899997688887066000866600607999999888666557788708885596669998698688876657776669976090999708778898655877788777998888000 : Predator Rel


dssp             : -HHHHHHHHH---HHHHHHHHHHH--HHHHHHHHHHHHHHHH--EE--HHH--HHH----HHH--EEEEE------------------------HHHHHHHHHHHHH------------HHHHH--EEEEE----EE--E--------HHHHHHHHHHHHHHH----EEEEE-HHHHHH--------EEEEE----------HHH--HHHHHHHHHHH---------- :dssp
define           : HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHH-----EEEEEEE-----------------------HHHHHHHHHHHHHHHH---------HHHHHHHH--EEEEEEE------------HHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHHEEEE---EEEEEE--------------HHHHHHHHHHHHHHEEEEE--- :define
stride           : -HHHHHHHHH---HHHHHHHHHHHH-HHHHHHHHHHHHHHHH--EE--HHH--HHH----HHH--EEEEE------------------------HHHHHHHHHHHHH-----------HHHHHHH-EEEEE----EE-----------HHHHHHHHHHHHHHH----EEEEE-HHHHHH--------EEEEE----------HHH-HHHHHHHHHHHHH--------- :stride


Q3 values for 1udh-1-AUTO.1  View SS in Rasmol

	dssp	define	stride
phd	75.00	68.86	74.12
dsc	67.54	72.37	70.18
pred	74.56	73.68	74.56
mul	67.11	67.98	67.98
nnssp	75.00	69.74	74.12
zpred	54.82	50.88	53.95
cons	76.32	71.05	76.32