Results for 1umub-1-AS


1umub-1-AS    : DYVEQRIDLNQLLIQHPSATYFVKASGDSIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPNSAYSPITISSEDTLDVFGVVIHVVKA : LEXA_PRORE
LEXA_PRORE    : EHIESHYQVDP.ELFKPHADFLLRVNGMMKDIGIMDGDLLAVHKTQNVHNGQVVVARIEDEVTVKRFKQQGRVELIAEPEFEPIVVDLRQQFTIEGLAVGVIRN : MTCY05A640
MTCY05A640    : EAVEDVFPLPR.ELVGEGTLFLLKVIGDMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGQVWLMPHPAFDPIPGNDA..TVLGKVVTVIRKV : ECAE0002148
ECAE0002148   : EVDLSTAETYPCPVPCGEMTYILRVIGDMIDEYR.PGDMIFVDPEVPACHGDDVIALMHGETTFKRLIEDGQRYLKALPNWPEPYIKINGNCSIIGTVIFSGKP : LEXA_HAEIN
LEXA_HAEIN    : QHIEATYRVDA.DMFKPQADFLLKVYGLMKNVGILDGDLLAVHSTKDVRNGQIVVARIEDEVTVKRLEKKGIIYLHAEEEFDPIVVNLEEQFEIEGIAVGIIRN : LEXA_PSEPU
LEXA_PSEPU    : QHIEQSCNINP.AFFHPQADYLLRVHGMMKDVGIFDGDLLAVHTCREARNGQIVVARIGDEVTVKRFKREGKVWLLAEPEFAPIEVDLKEQLVIEGLSVGVIRR : JC4042
JC4042        : EHIESHYQVDP.ALFHPRADFLLRVQGMMKNIGILDGDLLAVHKTQEVRNGQVVVARLDEDVTVKRFQRKGQVWLLPEEELSPIEVDLSCQLTIEGLAVGVIRN : MUCA_SALTY
MUCA_SALTY    : GYEKQELNLHEYCVRHPSATYFLRVSGSMEDGRIHDGDVLVVDRSLTASHGSIVVACIHNEFTVKRLLLRPRPCLMPMDFPVYYIDPDNESVEIWGVVTHSLIE : XXU13633
XXU13633      : DYVEQTLDLNELCIKRPAATFFVRVEGDMIDAGIHPDDILVVDRSVQAEHGDIVIAGIHGELTVKELQLRPCVKLIPRQAYEPIHIPEGTELEIFGVVTNVVRN : UMUD_SALTY
UMUD_SALTY    : DYIEQRIDLNELLVSHPSSTYFVKASGDMIEAGISDGDLLVVDSSRNADHGDIVIAAIEGEFTVKRLQLRPTVQLIPMGAYRPIPVGSEDTLDIFGVVTFIIKA : IMPA_SALTY
IMPA_SALTY    : DYAEQELDLNSYCISRPAATFFLRASGEMNQAGVQNGDLLVVDRAEKPQHGDIVIAEIDGEFTVKRLLLRPRPALEPVSPEFRTLYPEN..ICIFGVVTHVIHR : SAMA_SALTY
SAMA_SALTY    : DYTEEELDLNAYCIRRPAATFFVRAIGDMKEMGLHSGDLMVVDKAEKPMQGDIVIAETDGEFTVKRLQLKPRIALLPI.PAYPTLYPEE..LQIFGVVTAFIHK : JC5162
JC5162        : DHIEQDFSFDRLMDLRAPHIYVAKIDGDMEGAKIFHDSLVVVDRSRKPSSGSIVIAALNNEPVSKILILQGHVVLKSAPAYPPRHILEGEELSIWGVVRHGVTS : RNU77699
RNU77699      : ..............INAPHTYVVLVSGDMTGAGIFDGDYLIVSRALEAKSGDVVVACLNGDVFVKRLGRCQSYVLQSEPDYAPRYVLDDD.............. : UNG_HSV7J

              : 32--------42--------52--------63--------73--------83--------93--------103-------114-------124-------134- :
OrigSeq       : DYVEQRIDLNQLLIQHPSATYFVKASGDSIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPNSAYSPITISSEDTLDVFGVVIHVVKA :OrigSeq
cons          : ---HEEE-----EE-----EEEEEEEE-EEEEE-----EEEEEE--------EEEEEE----EEEHH----EEEEEE------EEE-----EEEEEEEEEEEE- :cons
dsc           : ----EEE------------EEEEEEEE-EEEEE-----EEEEE--------EEEEEEE----EEE------EEEEEE------EEE-----EEEEEEEEEE--- :dsc
mul           : --HHHHH-----EE------EEEHH------H------EEEEH---------EEEHHHHHHHHHHHHH----EEE----------------H-EH-EEEEEE-- :mul
nnssp         : HHHHHH------EE-----EEEEE--------------EEEEE---------EEEEEE----HHHHHHH---EEEE--------EE-----EEEEEEEEEEEE- :nnssp
phd           : ---EEEE-----EEE----EEEEEEEE-EEEEEE----EEEEEEE-------EEEEEE--EEEEEEE----EEEEEE------EEE----EEEEEEEEEEEEE- :phd
pred          : ---HHHHH-----------EEEEEE-------------EEEEEE--------EEEEE----HHHHHHHH---EEEE---------------EEEEEEEEEE--- :pred
zpred         : -HHHH-------------HHEEEEHHHHHHEEEE---HEEEEHHHH----HEEEEEEHHHHHHHHHHH----EEEE----------------HHH--EEE---- :zpred


access        : E-BEEBBEBEBBBBBEEBBEBBBEBBBEB-EBBBBEBEBBBBEEB-EBEEBEBBBBBBEEEBBBEEBEEEB-BBBBBEEE--EBBBEEEEEBBBBBBBBBBBEE : access

PHD Rel       : 94022321333233333332799985220123422786589963224788848999953615667311142267651568986232376326899868998869 : PHD Rel
Pred Rel      : 00777887887667899666999958888877688999099868578999960999979767777778689878858999998667789985766685555000 : Predator Rel


dssp          : --------HHHHH---HHHEEEEE--------------EEEEE---------EEEEEE--EEEEEEEE-----EEE-------EE------EEEEEEEEEEE-- :dssp
define        : -------HHHHHH------------------------------------------------------------------------------------------- :define
stride        : --------HHHHH------EEEEEE------------EEEEEE--------EEEEEEE--EEEEEEEE-----EEE-------EE------EEEEEEEEEEE-- :stride


Q3 values for 1umub-1-AS  View SS in Rasmol

	dssp	define	stride
phd	69.23	34.62	71.15
dsc	71.15	46.15	75.00
pred	72.12	53.85	74.04
mul	61.54	50.96	62.50
nnssp	73.08	48.08	73.08
zpred	50.96	39.42	52.88
cons	69.23	40.38	71.15