Results for 1vcab-2-AUTO.1


1vcab-2-AUTO.1    : SFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISP : A46052
A46052            : SFPKDPEIQFSGPLEVGKPVTVKCLAPDIYPVYRLEIDLFKGDQLMNRQEFSSEEMTKSLETKSLEVTFTPVIEDIGKALVCRAKLHIDQIDSTLKERETVKELQVYISP : JC2457
JC2457            : SFPKDPEIHWSSLPEVGKPVTVRCLVPDVYPVEKLEIELLKDNHSMVSQNFLELIDIKSKETKSLEFTFTPTEEDIGKAIVCQATLIID...GQPSVKTTPEKMQVYISP : ICA2_MOUSE
ICA2_MOUSE        : QPPAQVTLKLQPPVFVGEDFTIECTVSPVQPLERLTLSLLRGRETLKNQTFGGAETVPQEATAT..FNSTALKKD.GLNFSCQAELDLRP.HGGYIIR.SISEYQILEVP : CFU32086
CFU32086          : SFPKDPEIQLSGPLEVGKPVTVTCLVRDVYPFDRLEMNLLNGNDLLQSKDFLEPMEKKSLETKSLEVTFTPTNEDIGKGLVCRAQLHMDEIDFEPKERETTKELQVYISP : CEZC1013

                  : 90--------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------- :
OrigSeq           : SFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISP :OrigSeq
cons              : ------EEEE---------EEEEEE-------HHHHHHHH---------HHHHHHHH------EEEEEE----------EEEEEEE-----------HHHH--HEEEE-- :cons
dsc               : ------EEEE----------EEEEE-------HHHHHHHH-------HHHHHHHHHHH------EEEEE-----------EEEEEEEE---------------EEEE--- :dsc
mul               : -------------------EEEEEEE--------HHHHHHH-HH-HH---HHHHHHHHHHHHHH-H-EE--H---HHHHHH-HHHHHH-H-----H-HHHHHH-EEEE-- :mul
nnssp             : ------EEEE----------EEEEE--------HHHHHHH---------HHHHHHHH-------EEEEE----------EEEE-------------HHHHHHHHHHEE-- :nnssp
phd               : ------EEE----------EEEEEEE------HHHHEE-------E-----------------EEEEEE---------EEEEEEEE-----------HHHH---EEEE-- :phd
pred              : -------------------EEEEEE------HHHHHHHHH----HHHHHHHHHHHH-------EEEEEE--------HHHHHHHHHHHH------HHHHHHHHHHHH--- :pred
zpred             : ------EEE--------EEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-E-HHHHHHHHHHHHHHHHHEE-------HHHHHHHEEEEEE- :zpred


access            : E-EEEBEBEBEBE-EBBEEBBBEBBBEEB-BBEEBEBEBBEEEEBBEBEEBBEEEEEEEEEEEEBEBBBEBBBEEBBEBBBBEBEBBBEEBEE-BEBEEBBEEBEB-BBE : access

PHD Rel           : 99998344213763148853899983599952142031226673111222454256564565147886242533335325675632235448997233411121256719 : PHD Rel
Pred Rel          : 00009876789998999977900867887865687779887777588886888696655670556670788886656677785887557776898688878887760000 : Predator Rel


dssp              : E-----EEEE---EE----EEEEEEEEEEE-HHHEEEEEEE--EEEEEEE----------EEEEEEEEE---HHH---EEEEEEEE----------EEEEEEE--EE--- :dssp
define            : ----EEEEEEE------EEEEEEEEEEEE----EEEEE--------EEEEEEEE------EEEEEEE---------EEEEEEEEEEEE----------EEEEEEEEEEEE :define
stride            : E-----EEEE----E----EEEEEEEEEEE-HHHEEEEEEE--EEEEEEE----------EEEEEEEEE---HHH--EEEEEEEEE----E--E--EEEEEEEE--E--- :stride


Q3 values for 1vcab-2-AUTO.1  View SS in Rasmol

	dssp	define	stride
phd	68.18	63.64	64.55
dsc	52.73	56.36	50.91
pred	43.64	39.09	42.73
mul	32.73	35.45	30.00
nnssp	50.91	50.91	49.09
zpred	37.27	37.27	36.36
cons	57.27	57.27	54.55