Results for 1vhrb-2-AUTO.1


1vhrb-2-AUTO.1    : SQPCNEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREG : RNMKPX
RNMKPX            : SSDCSQILPYLYLGCAKDSTNLDVLGKYGIKYILNVTP.......NLPNAFEHGGEFTYKQIPISDHWSQNLSQFFPEAISFIDEARSK.KCGVLVHCLAG : XLMAPKPH
XLMAPKPH          : PEFCTEILPFLYLGSAYHASRKDMLDTLGITALINVSA.......NCPNHFE..GHFQYKSIPVEDSHKADISSWFNEAIDFIDSVKNS.GGRVFVHCQAG : PAC1_MOUSE
PAC1_MOUSE        : PDLCSEILPYLYLGSCNHSSDLQGLQACGITAVLNVSA.......SCPNHFE..GLFHYKSIPVEDNQMVEISAWFQEAISFIDSVKNS.GGRVLVHCQAG : A56947
A56947            : PEFCSEILPFLYLGSAYHAARRDMLDALGITALLNVSS.......DCPNHFE..GHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKDC.RGRVLVHCQAG : VH01_VACCC
VH01_VACCC        : LLRSTRVTNNVYLG.NYKNAMDAPSSEVKFKYVLNLTM........DKYTLPN.SNINIIHIPLVDDTTTDISKYFDDVTAFLSKCDQR.NEPVLVHCAAG : I49364
I49364            : VPQCKEVLPGLFLGSSAMKSKLPILQKHGITHIICIRQ.......NIEANFIKPQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQN.GGKVLVHGNAG : HSMAPKP4
HSMAPKP4          : .SDCSQILPNLYLGSARDSANLESLAKLGIRYILNVTP.......NLPNFFEKNGDFHYKQIPISDHWSQNLSRFFPEAIEFIDEALSQ.NCGVLVHCLAG : S31978

                  : 27--------37--------47--------57--------67--------77--------87--------97--------107-------117-------1 :
OrigSeq           : SQPCNEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREG :OrigSeq
cons              : ---------EEEE-------HHHHHHH---EEEEE---------------------EEEEEE-------HHHHHHHHHHHHHHHHHHH----EEEEEE--- :cons
dsc               : ----------EEE-------HHHHHHH---EEEEE----------------------EEEEE------HHHHHHHHHHHHHHHHHHH-----EEEEEE--- :dsc
mul               : ---------EEE-----------HH-H--H-EEEEH---------------------------------H----HHHHHHHHHHH--------EEEE---- :mul
nnssp             : ------------------HHHHHHHHH----EEEE-------EEE------------EEEE--------HHHHHHHHHHHHHHHHHHHH---EEEEE---- :nnssp
phd               : -------EEEEEEE-------HHHHHH---EEEEEE-------------------EEEEEEE-------HHHHHHHHHHHHHHHHHHH----EEEEEE--- :phd
pred              : ---------EEE-------HHHHHHH----EEEEE---------------------EEEEEEE------HHHHHHHHHHHHHHHHHHH-----EEE----- :pred
zpred             : ----EEEEEEEEEE-----HHHHHHHHHEEEEEEEE----------------------EEEEEEE---------HHHHHHHHHHHH------EEEEEE--- :zpred


access            : EEEBEEBBBBBBBBBB--BBEBEBBBEBBBEBBBBB-EB-BBBBBBBBBBBEEEEEBBBEBBEBEEEBEEEBBEBBEEBBEBBEEBEEEEEBEBBBBB-EE : access

PHD Rel           : 98644323443111234311114776237379998438961124555532248981689973127883134898789999999999853889169985189 : PHD Rel
Pred Rel          : 00908806766689997778587788565560666089776665689999909998766676688997775888587888888888577799595559000 : Predator Rel


dssp              : ---EEEEE--EEEE-HHHH--HHHHHHH---EEEE--E------E------------EEEE----------HHHHHHHHHHHHHHHHH-----EEEE---- :dssp
define            : ---------EEEEEHHHHHHHHHHHHHHH--EEEEEE----------HHHHHH-----EEEEE-----------HHHHHHHHHHHHHHH-EEEEEEEE--- :define
stride            : ---EEEEE--EEEE-HHHHH-HHHHHHH---EEEE--E------E---HHHH-----EEEE----------HHHHHHHHHHHHHHHHH-----EEEE---- :stride


Q3 values for 1vhrb-2-AUTO.1  View SS in Rasmol

	dssp	define	stride
phd	78.22	69.31	73.27
dsc	78.22	69.31	73.27
pred	75.25	68.32	72.28
mul	69.31	63.37	64.36
nnssp	78.22	67.33	75.25
zpred	73.27	73.27	70.30
cons	78.22	71.29	73.27