Results for 1xvab-1-GJB


1xvab-1-GJB    : GEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPGQAYVPCYFIHVLKKTG : SFTYLORF2
SFTYLORF2      : PTTRRDRQLYDLVHQGKGKDYHADLAALVRRHSAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIP......RRRNP..D.AVLHHG....DMRDFSLGRRFSAVTCMFSSIGHLAG....QAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAG...TVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRG.........ITHHEESHRITLFTEQYERAFT...AAGLSVEFMPGGPSGRGLFTGLPGAKGETR : ECU234961

               : 24--------34--------44--------54--------64--------74--------84--------94--------104-------114-------124-------134-------144-------154-------164-------174-------184-------194-------204-------214-------224-------234-------244-------254-------264-------274-------284------ :
OrigSeq        : GEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPGQAYVPCYFIHVLKKTG :OrigSeq
cons           : ---HHHHEEEE-------HHHHHHHHHHHHH----EEEEEE------EEEEE------E-----HHHHHHHHHHHH---------HEEEEH-----------------EEEEE-------------HHHHHHHHHHHHHHH----EEEEE------------------EEEEE-----EEEEEEE----EEEEEEEEEEE---------------EEE-----HHHHHHHHHHHH----E-EEEE----------EEE----------- :cons
dsc            : ---HHHHHHEE--------HHHHHHHHHHHHH----EEEEE------EEEE------EEE--HHHHHHHHH--------------HHHHHH-----------------EEEEE-------------HHHHHHHHHHHHHH-----EEEEE-----EEEE---------EEEEE-------EEEEEE----EEEEEEEEEEE-----------EEEEE----------HHHHHH------EEEEE-------------EEEEEE------ :dsc
mul            : ---HHHHHH------------HHHHHHHHHHH---H--HHHH-------HHHHH----H-HH---HHHHHH----------------HHH------------------EEEEEE------------HHHHHHHHHHHHHHH----EEEE-------------E------EE-----E-EEE--------HH-EEEEEEEE-----------------------EE-HHH-HHHH--------EE-----------EEEE----HH---- :mul
nnssp          : --HHHHHEEEE---------HHHHHHHHHHH-----EEEEE------HHHHH------------HHHHHHHHHHHHHH-------HHHHHH---EE------------EEEE----------------HHHHHHHHHHHHH----EEEE--------------------EE-------EEEEEE-------EEEEEEEEE-----------------------HHHHHHHHHHHH------EE-------------------------- :nnssp
phd            : ------EEEEEE------HHHHHHHHHHHHH----EEEEE------EEEEEEE---E-E-----HHHHHHHHHHHH----------EEEE------------------EEEEEE------------HHHHHHHHHHHHHHE----EEEEE------------------EEEEE---EEEEEEEEE----EEEEEEEEEEE---------------EEE-----HHHHHHHHHHHH---EE--EEEE---------EEE----------- :phd
pred           : ---HHHHHHH-----HHHHHHHHHHHHHHHH----EEEEEE-------EEE-------EEE--HHHHHHHHHHHHHHH-------EEEEE---EEE----------EEEEEEE-------------HHHHHHHHHHHHHHHH----EEEE-----------------EEEEEE-----EEEEEEE----EEEEEEEEEEEE-----------EEEEEEE---HHHHHHHHHHHHH----EEEEEE--------EEEEEEEEEEEEE--- :pred
zpred          : ---HHHEEEEEE-------HHHHHHHHHHHHH---EEEEEEE-HHHEEEEHHHH--HHHHHHHHHHHHHHHH-------------HHHHHH-------EEE------EEEEEE---EE--------HHHHHHHHHHHHEEE---EEEEEE-------------------EEE----EEEEEE-----HHHHHHEEEEEEEE----------------------HHHHHHHHHHHH-------EEEEEE-------EEEEEEE------- :zpred


access         : EEEEEBBEBBBB-EEEEEEE-EBBBBBBBEEBBBBBBBEBBBBBBBBBBBBBEEBBEBEBBEBBBEBBEBBBEE-BEEEEEEEBEEBBBEEBEBBBBBEEBEBEEEBBBBBBBBBBBBBBEEEEEEEBEBEBBBEEBBBBB-EEBBBBBEB--BE-BBBEBBBBEEEEBBBEBEBEEEBBBBBB-EEBEBBBBBBBBBBBBEEEE-EEBEEBBEBBBBB-BBBBBBBBEBBEEBBEE-BBBBBBBEB-EE-EEEEBBBBBBBEBEEEEE : access

PHD Rel        : 99534415322134455189999999999991785157612255421146653588111223427999999543110144763322123204321123253779756169987445443479987569999999999985249993999427656656876447999279971891389998862467436899989986148899999987411353133311347899999967871311225336899998711113223346799 : PHD Rel
Pred Rel       : 00766799975909779999090009999979996579776688885600700690068956766679999999999500979778797670867668787899967799006788765809997789900990999876000906099099987507797990000758887997776669000689976006660000099999999899556866807778999999999078890555668898999990078770000055000 : Predator Rel


dssp           : -HHHHHHHHHH----EE-HHHHHHHHHHHHH----EEEE------HHHHHHHH---EEEEEE--HHHHHHHHHHHHHH---HHHH--EEEE--HHHHHHH------EEEEEE----HHH--------HHHHHHHHHHH--EEEEEEEEEEEE-HHHHHHH----------EE----EEEEEEEEEE--EEEEEEEEEEEEE---------EEEEEEEEE----HHHHHHHHHHH----EEEEEE----E----------EEEEEEEE-- :dssp
define         : HHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHH-EEEEEE----HHHHHHHHHHH-EEEEE--HHHHHHHHHHHHHHHH-HHHHHHEEEEEEEE-HHHHHH------EEEEE--HHHHHH------HHHHHHHHHHHHHHH----EEEEE--HHHHHHHH--EEEE----EEEEEEEEEEEEEEE------EEEEEEE---------EEEEEE---------HHHHHHHHHHHHHH--EEEEEE----------EEEEEEEEEEEEEEE :define
stride         : -HHHHHHHHHHH----E-HHHHHHHHHHHHHH---EEEE------HHHHHHHHH--EEEEEE--HHHHHHHHHHHHHH---HHHH--EEEE--HHHHHHH------EEEEEE----HHH-------HHHHHHHHHHHHH-EEEEEEEEEEEE-HHHHHHH----------E----EEEEEEEEEEE--EEEEEEEEEEEEE---------EEEEEEEEE----HHHHHHHHHHHH---EEEEEEE---E----------EEEEEEEE-- :stride


Q3 values for 1xvab-1-GJB  View SS in Rasmol

	dssp	define	stride
phd	65.43	57.99	65.80
dsc	63.94	55.39	63.20
pred	71.00	63.57	70.63
mul	55.39	51.30	56.13
nnssp	65.06	57.99	64.31
zpred	57.99	54.28	59.48
cons	65.80	59.48	65.80