Results for 1znbb-1-AS


1znbb-1-AS    : AQKSVKISDDISITQLSDKVYTYVSLAEIEGMVPSNGMIVINNHQAALLDTPINDAQTETLVNWVADSLHAKVTTFIPNHWHGDCIGGLGYLQKKGVQSYANQMTIDLAKEKGLPVPEHGFTDSLTVSLDGMPLQCYYLGGGHATDNIVVWLPTENILFGGCMLKDNQATSIGNISDADVTAWPKTLDKVKAKFPSARYVVPGHGDYGGTELIEHTKQIVNQYIESTSKP : BLAB_BACCE
BLAB_BACCE    : AERTVEETGTISISQLNKNVWVHTELGYFSGAVPSNGLVLNTSKGLVLVDSSWDDKLTKELIEMVEKKFKKRVTDVIITHAHADRIGGMKTLKERGIKAHSTALTAELAKKNGYEEPLGDLQSVTNLKFGNMKVETFYPGKGHTEDNIVVWLPQYQILAGGCLVKSASSKDLGNVADAYVNEWSTSIENVLKRYGNINLVVPGHGEVGDRGLLLHTLDLLK......... : BLAB_BACFR
BLAB_BACFR    : AQKSVKISDDISITQLSDKVYTYVSLAEIEGMVPSNGMIVINNHQAALLDTPINDAQTEMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQRKGVQSYANQMTIDLAKEKGLPVPEHGFTDSLTVSLDGMPLQCYYLGGGHATDNIVVWLPTENILFGGCMLKDNQATSIGNISDADVTAWPKTLDKVKAKFPSARYVVPGHGDYGGTELIEHTKQIVNQYIESTSKP : S25844
S25844        : ........MTVEVREVAEGVYAY..EQAPGGWCVSNAGIVVGGDGALVVDTLSTIPRARRLAEWVDKLAAGPGRTVVNTHFHGDHAFGNQVFAPIAHEDMRSAMVTTGLALTGLWPPNVTFRDRLTLHVGERQVELICVGPAHTDHDVVVWLPEERVLFAGDVVMSGVTALFGSVAGTLAARWVQAADAVDRRLTAERLVANLHRAHEELLHVRDAMEIFAELVAYNGGP : CMBLAB
CMBLAB        : SLQAFGENPDVKIEKLKDNLYVYTTYNTFNGKYAANAVYLVTDKGVVVIDCPWGEDKFKSFTDEIYKKHGKKVIMNIATHSHDDRAGGLEYFGKIGAKTYSTKMTDSILAKENKPRAQYTFDNNKSFKVGKSEFQVYYPGKGHTADNVVVWFPKEKVLVGGCIIKSADSKDLGYIGEAYVNDWTQSVHNIQQKFSGAQYVVAGHDDWKDQRSIQHTLDLINEYQQKQKAS : BLAB_SERMA
BLAB_SERMA    : AAESLP...DLKIEKLDEGVYVHTSFEEVNGVVPKHGLVVLVNAEAYLIDTPFTAKDTEKLVTWFVER.GYKIKGSISSHFHSDSTGGIEWLNSRSIPTYASELTNELLKKDGKVQATNSFSG.VNYWLVKNKIEVFYPGPGHTPDNVVVWLPERKILFGGCFIKP...YGLGNLGDANIEAWPKSAKLLKSKYGKAKLVVPSHSEVGDASLLKLTLEQAVKGLNESKKP : HXDB_MOUSE

              : 18--------28--------38--------50--------60--------70--------80--------90--------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240------- :
OrigSeq       : AQKSVKISDDISITQLSDKVYTYVSLAEIEGMVPSNGMIVINNHQAALLDTPINDAQTETLVNWVADSLHAKVTTFIPNHWHGDCIGGLGYLQKKGVQSYANQMTIDLAKEKGLPVPEHGFTDSLTVSLDGMPLQCYYLGGGHATDNIVVWLPTENILFGGCMLKDNQATSIGNISDADVTAWPKTLDKVKAKFPSARYVVPGHGDYGGTELIEHTKQIVNQYIESTSKP :OrigSeq
cons          : -----E----EEEEE----EEEEE-------------EEEEE---EEEEE-----HHHHHHHHHHHHHH---EEEEE------------EEEE-----HHHHHHHHHHHHH-------------EEEE----EEEEEE--------EEEEEE---EEEE---EEE--------------HHHHHHHHHHHHHH----EEEE--------HHHHHHHHHHHHHHHHH---- :cons
dsc           : ----------EEE------EEEEE-------------EEEE----EEEEE-----HHHHHHHHHHHHH----EEEEE-----------HHHHHH----HHHHHHHHHHHHH-------------EEEE-----EEEEE---------EEEE--------------------------------HHHHHHHHH-----EEEEE-------HHHHHHHHHHHHHHH------ :dsc
mul           : ----------EHHHH----EEEEE-------H-----EEEE----EEEE--------HHHHHHHHHHHH-HH-EEEE-------------------------HHHHHHHHH----------------------EEEEE---------EEEEE----EE----EE--------------H-----HHHHHHHHH----EEEE--------HHHHHHHHHHHHHHH------ :mul
nnssp         : ----------EEEEE----EEEEE-------------EEEE----EEEE------HHHHHHHHHHHHHH----EEEE---------------------HHHHHHHHHHHH---------------EEE-----EEEEE---------EEEEE----EEE---EE---------------HHHHHHHHHHHHHH----EEEE--------HHHHHHHHHHHHHHHHH---- :nnssp
phd           : -----E----EEEEE----EEEEEEE-----EE----EEEEE---EEEEE----HHHHHHHHHHHHHHH---EEEEEE-----------EEEE----HHHHHHHHHHHHHHH------------EEEEE---EEEEEEE-------EEEEEEE-EEEEE---EEEE----------HHHHHHHHHHHHHHHHH----EEEE----------HHHHHHHHHHHHHHH---- :phd
pred          : ---EEE---EEEEEE----EEEEE------------EEEEEE---EEEEE-----HHHHHHHHHHHHHH--EEEEE------------EEE--------HHHHHHHHHHHH-------------EEEE----EEEEEE--------EEEEEE---EEEE---EEE--------------------HHHHHHHH---EEEEE---------HHHHHHHHHHHHHH------ :pred
zpred         : H--------HHHHHHH---EEEEE-----------EEEEEEE---EEEEEE-----HHHHHHHHHHHH----EEEEEEE----------EEEE--------HHHHHHHHH---------------EE-----EEEEEE-------EEEEEEEHH-EEHHHEEEEE------EEEEEEEEEHHHHHHHHHHHHHE--EEEEEE-------HHHHHHHHHHHH--------- :zpred


access        : EEEEBEEBBEBBBEEBEEEBBBBBBBB-BEBBBBBEBBBBBBBEBBBBBEBB-EEEEBEEBBEBBBEEBEEEBBBBBBBBB-BEBBEBBEBBBEEBBEBBBEEBBBEBBEEEE-E-BE-EBEE-BBBEBBEBEBEBBBBBEE-B-E-BBBBBBEEEBBBBBBBBEEBBBEBBBEBBEBBBEEBBEBBEEBEEEBEEBEBBBBB-EEBEEBEBBEBBBEBBBEBBEEEEEE : access

PHD Rel       : 98521346721477525655999862244651126886998158639983687614688999999999736615899524555655441123322424678899999998617878765521314776437527999728887778189985213334244177747643343431232256577899999861884687658887554331146899999998516799 : PHD Rel
Pred Rel      : 00066500005995577600988568888888789900999698888087899878888999798887566565566899999987966666666865556668888888879808787779775876699866999609999999500005898870099657588887788887886057777689899867887990068999998566788898990887777000 : Predator Rel


dssp          : ----EEEE--EEEEE----EEEEEEEEE---EEEEEEEEEEE--EEEEE-----HHHHHHHHHHHHH----EEEEEE-----HHHH--HHHHHH---EEEEEHHHHHHHHHH------EEE--EEEEEE--EEEEEE-----------EEEE----EEEEEEEEE-----------------HHHHHHHHHHH-----EEEEEE---E--HHHHHHHHHHHHHHHH---- :dssp
define        : EEEEEE------EEEE----EEEEEEEEE--EEEEE-EEEE--EEEEEEEE--HHHHHHHHHHHHHHH-EEEE--EEEE--------HHHHHHHHEEEEEEHHHHHHHHHHHHEEEEEE----EEEEE--EEEEE------------EEEEE---EEEE----------------------HHHHHHHHHHHHHH--EEEE---EEEEEHHHHHHHHHHHHHHHHHHH-- :define
stride        : ----EEEE--EEEEEEE--EEEEEEEEE---EEEEEEEEEEE--EEEEE-----HHHHHHHHHHHHHHH--EEEEEE----------HHHHHHHH--EEEEEHHHHHHHHHH------EEE--EEEEEE--EEEEEEE---------EEEEE----EEEEEEEEE----------------HHHHHHHHHHHH-----EEEEEE---E-HHHHHHHHHHHHHHHHHH--- :stride


Q3 values for 1znbb-1-AS  View SS in Rasmol

	dssp	define	stride
phd	74.78	65.65	76.09
dsc	73.91	66.52	74.35
pred	74.35	64.35	74.78
mul	68.26	59.57	69.57
nnssp	73.48	65.22	75.65
zpred	62.17	54.78	63.91
cons	75.22	66.96	77.39