Results for 2afnc-1-AUTO.1


2afnc-1-AUTO.1    : IAALPRQKVELVDPPFVHAHSQVAEGGPKVVEFTMVIEEKKIVIDDAGTEVHAMAFNGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTEINPGEKTILRFKATKPGVFVYHCAPPGMVPWHVVSGMNGAIMVL : A55428
A55428            : GVNYAFFNNITYTAPKVPTLMTVLSSGANNSEIYGSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALEVPHSFDNHPAFPEYPMRRDTLVRPQSNFVIRFKADNPGVWFFHCH....IEWHLLQGL.GLVLVE : ASNDHGO
ASNDHGO           : GPSSRRCWQDGFDIWSDYTDPKVAPPG.KLVEYDLTVTQVTISPDGY..ERLGTVFNGQYPGPLIEADWGDTLRITVHNNLTNVHWHGIRLFETNWIDGVPGVTQIPPGESQVYEFRATQYGTSWYHSHFSL....QYSNGLYGPLVIH : ANIA_NEIGO
ANIA_NEIGO        : TAETPAGELPVIDAVTTHAPEVPPAIDPAKVRVKMETVEKTMKMDDG.VEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGGGAAATFTAPGRTSTFSFKALQPGLYIYHCAVAP.VGMHIANGMYGLILVE : RHU65658
RHU65658          : IAALPRRKLDLVKPPFVHVHTQKAEGGPKVVEVTLTIEEKKLVIDGKGTEVNAMTFDGSVPGPLIVVHQDDYVEVTLVNPETNTLQHNIDFHSATGALGGGALTVVNPGESAVLRFKATKAGVFVYHCAPPGMVPWHVTSGMNGAIMVL : NIR_PSESP
NIR_PSESP         : IATLERVKVELVKPPFVHAHTQKAEGEPKVVEFKMTIQEKKIVVDDKGTEVHAMTFDGSVPGPMMIVHQDDYVELTLVNPDTNELQHNIDFHSATGALGGGALTVVNPGDTAVLRFKATKAGVFVYHCAPAGMVPWHVTSGMNGAIMVL : NIR_PSEAR
NIR_PSEAR         : .EGLQRVKVDLVAPPLVHPHEQVVSGPPKVVQFRMSIEEKKMVIDDQGTTLQAMTFNGSMPGPTLVVHEGDYIELTLVNPATNSMPHNVDFHAATGALGGAGLTQVVPGQEVVLRFKADRSGTFVYHCAPQGMVPWHVVSGMNGALMVL : RSU62291
RSU62291          : LSNLPRVKHTLVPPPFAHAHEQVAASGPVINEFEMRIIEKEVQLDED.AYLQAMTFDGSIPGPLMIVHEGDYVELTLINPPENTMPHNIDFHAATGALGGGGLTLINPGEKVVLRFKATRAGAFVYHCAPGGMIPWHVVSGMAGCIMVL : SS56KBFR5

                  : 9---------19--------29--------39--------49--------59--------69--------79--------89--------99--------109-------119-------129-------139-------149------ :
OrigSeq           : IAALPRQKVELVDPPFVHAHSQVAEGGPKVVEFTMVIEEKKIVIDDAGTEVHAMAFNGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTEINPGEKTILRFKATKPGVFVYHCAPPGMVPWHVVSGMNGAIMVL :OrigSeq
cons              : ------EEE--------------------EEEEEEEEE--EEEE-----EEEEEE--------EEEEE---EEEEEEE-----------------------EEEEE-----EEEEEE-----EEEEEE------EEEEE-----EEEEE :cons
dsc               : ------EEEEE---------EEE------EEEEEEEEEEEEEEE-----EEEEEEEE------EEEEE----EEEEEE--------EEEEEEEEEEE----EEEEE-----EEEEEE-----EEEEEE-----EEEEEE-----EEEEE :dsc
mul               : ---------EE------------------EEEEHHHHHHHHHHH-----HHH-----------EEEE-----EEEEE------------------------EEEEE------E-HHH-----EEEEE---------E--------EEEE :mul
nnssp             : -----------------------------EEEEEEEE---EEEE-----EEEEE----------EEE----EEEEEE--------------------------EEE-----EEEEEE-----EEEEE-----------------EEEEE :nnssp
phd               : -----EEEE--------------------EEEEEEEEE--EEEE----EEEEEEE--------EEEEE---EEEEEEE-----------------------EEEEE----EEEEEEEE----EEEEEE------EEEEEE----EEEE- :phd
pred              : --------EEE-------------------HHHHHHHHHHHEEE-----EEEEE---------EEEEE---EEEEEEE------------------------EEE------EEEEE------EEEEEE--------EEE---------- :pred
zpred             : --------EEE------------------HHHHHHHHHHHHHHHH---HHHEEEE--------EEEEE--HHEEEEE--------EHHEHE-----------EEEE----HEEEEHHH----EEEEEE-------EEEE-----EEEEE :zpred


access            : EEE-EEBEBEBBEBBBB-BBEEBBEEEEEBBEBEBEBEEEEBBBEEEBBEBBBBBBEBE-EBBBBBBBBEE-BEBBBB-EEEEEB-BBBEBBBBBBBBEEEBBBBB-EEEEBBBEBEBEEEBBBBBBBBBEEBBBBBBBBBBBBBBBBE : access

PHD Rel           : 99751122123367446775456889995579999862115898189717888731688899679972698279998669876532443321132434576258967894368999833595699984787861355652455368878 : PHD Rel
Pred Rel          : 00078786567000888660955799998566770688685690999077855568799999909775899688099889999887785555586789999756789990666967769999699887909007755766688775000 : Predator Rel


dssp              : -----EEE--------------E------EEEEEEEEEEEEEE------EEEEEEE--E-----EEEE---EEEEEEEE-------E--EE-----HHHH-----E---EEEEEEEE----EEEEEE------HHHHH----EEEEEEE :dssp
define            : ---EEEEEEEEEE--EEEE-------EEEEEEEEEEEEEEEEEEE--EEEEEEE--------EEEEE---EEEEEEEEE----------------HHHHHH----------EEEEE--EEEEEEEEEEEEE-HHHHHHHHH---EEEEE :define
stride            : -----EEE---------------------EEEEEEEEEEEEEE------EEEEEEE-------EEEEE--EEEEEEEEE-------E-EEE-----HHHH-----E---EEEEEEEEE---EEEEEEE-----HHHHHH---EEEEEEE :stride


Q3 values for 2afnc-1-AUTO.1  View SS in Rasmol

	dssp	define	stride
phd	76.51	64.43	78.52
dsc	73.83	57.72	74.50
pred	63.76	57.72	64.43
mul	61.74	51.01	60.40
nnssp	77.85	63.09	75.17
zpred	59.73	48.32	63.09
cons	77.85	65.10	78.52