Results for 2alp


2alp         : ANIVGGIEYSINNASLCSVGFSVTRGATKGFVTAGHCGTVNATARIGGAVVGTFAARVFPGNDRAWVSLTSAQTLLPRVANGSSFVTVRGSTEAAVGAAVCRSGRTTGYQCGTITAKNVTANYAEGAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSGGNVQSNGNNCGIPASQRSSLFERLQPILSQYGLSLVTG : SFA1_STRFR
SFA1_STRFR   : QREVGGDAIYGGGS.RCSAAFNVTKNGVRYFLTAGHCTNLSTWSSTSG.GTGVREGTSFPTNDYGIVRYTT.TTNVDGRVNYNGGQDIASAADAVVGQAIKKSGSTTKVTSGTVSAVNVTVNYSDGPVYGMVRTTACSAGGDSGGAHFAG.SVALGIHSGS....SGC.TGTNG...SAIHQPVREALSAYGVNVY.. : STMSAL
STMSAL       : NKLIGGDAIYASSW.RCSLGFNVRTSGAEYFLTAGHCTDGAAWRASSG.GTGQTAGSSFPGNDYGIVQYTG.SVS...RPGANG.VDITRAATPSVGTTVIRDGSTTGTHSGRVTALNATVNYGGGVVGGLIQTTVCAEPGDSGGSLYGSNGTAYGLTSGG....SGN.CSSGG...TTFFQPVTEALSAYGVSV... : S68947
S68947       : ...IGGEAIYAAGGGRCSLGFNVRSSGATYALTAGHCTEIATWYTNSGQTSGTRAGTSFPGNDYGLIRHSN.ASAADGRVYYNGSRDITGAGNAYVGQTVQRSGSTTGLHSGRVTGLNATVNYGGGIVSGLIQTNVCAEPGDSGGALFAG.STALGLTSGG....SGN.CRTGG...TTFFQPVTEALSAYGVSIL.. : SP1_RARFA
SP1_RARFA    : VRDYGGDALSG.....CTLAFPVYGG....FLTAGHCAVEGHILKTEMTGGGTVEASQFGGIDAAWAKNYGDWNGRGRVTHNGGGVDIKGSNEAAVGAHMCKSGRTTKWTCGYLLRKDVSVNYGNGHIVTLNETSACALGGDSGGAYVWN.DQAQGITSGS......N.MDTNN..CRSFYQPVNTVLNKWKLSLVTS : PRTC_STRGR
PRTC_STRGR   : ADIRGGDAYYMNGSGRCSVGFSVTRGTQNGFATAGHCGRVGTTNGVNQQAQGTFQGSTFPGRDIAWVATNANWTPRPLVNGGRGDVTVAGSTASVVGASVCRSGSTTGWHCGTIQQLNTSVTYPEGTISGVTRTSVCAEPGDSGGSYISGS.QAQGVTSGG....SGN.CSSGG...TTYFQPINPLLQAYGLTLVTS : PC2053
PC2053       : YDLVGGDAYYMGG.GRCSVGFSVTQGSTPGFATAGHCGTVGSTTGYNQAAQGTFEESSFPGDDMAWVSVNSDWNTTPTVNEGE..VTVSGSTEAAVGASICRSGSTTGWHCGTIQQHNTSVTYPEGTITGVTRTSVCAEPGDSGGSYISGS.QAQGVTSGG....SGN.CTSGG...TTYHQPINPLLSAYGLDLVT. : S34672
S34672       : YDLVGGDAYYIGN.GRCSIGFSVRQGSTPGFVTAGHCGSVGATTGFNRVSQGTFRGSWFPGRDMAWVAVNSNWTPTSLVRNGSG.VRVTGSTQATVGSSICRSGSTTGWRCGTIQQHNTSVTYPQGTITGVTRTSACAQPGDSGGSFISGT.QAQGVTSGG....SGN.CSIGG...TTFHQPVNPILSQYGLTLVR. : PRTA_STRGR
PRTA_STRGR   : TPLIGGEAITTGGS.RCSLGFNVSVNGVAHALTAGHCTNISSWSIG......TRTGTSFPNNDYGIIRHSN.PAAADGRVYYNGSQDITTAGNAFVGQAVQRSGSTTGLRSGSVTGLNATVNYGSSIVYGMIQTNVCAEPGDSGGSLFAG.STALGLTSGG....SGN.CRTGG...TTFYQPVTEALSAYGATVL.. : PRTB_STRGR
PRTB_STRGR   : TKLIGGDAIYSSTG.RCSLGFNVRSG.TYYFLTAGHCTDGATWWANSARTTGTTSGSSFPNNDYGIVRYTN.TTIP..KDGVGG.QDITSAANATVGMAVTRRGSTTGTHSGSVTALNATVNYGGGVVYGMIRTNVCAEPGDSGGPLYSG.TRAIGLTSGG....SGN.CSSGG...TTFFQPVTEALSAYGVSVY.. : STMSALO
STMSALO      : KTFAGGDAIFGGGA.RCSLGFNVTAGGSAAFLTRGHCGGGAMWSDAQG.GQATVDQAVFPEGDFGLVRYDGPSTEAPSEVDGD.QLPISGAAEASVGQEVFRMGSTTGLADGQVLGLDVTVNYPEGTVTGLIQTDVCAEPGDSGGSLFTRDGLAIRLTSGG....TRD.CTSGG...ETFFQPVTTALAAVGGTLGGE : PRTD_STRGR
PRTD_STRGR   : TPLIGGDAIWGSGS.RCSLGFNVVKGGEPYFLTAGHCTESVSWSDTQG.GSGANEGSSFPENDYGLVKYTS.DTAHPSEVNYDGSQAITQAGDATVGQAVTRSGSTTQVHDGEVTALDATVNYGNGIVNGLIQTTVCAEPGDSGGALFAGD.TALGLTSGG....SGD.CSSGG...TTFFQPVPEALAAYGAEIG.. : CEF40F82

             : 15--------35--------45--------52--------60--------84--------100-------110-------120-------124-------137-------159-------169-------180-------193-------202-------216-------221-------228-------238----- :
OrigSeq      : ANIVGGIEYSINNASLCSVGFSVTRGATKGFVTAGHCGTVNATARIGGAVVGTFAARVFPGNDRAWVSLTSAQTLLPRVANGSSFVTVRGSTEAAVGAAVCRSGRTTGYQCGTITAKNVTANYAEGAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSGGNVQSNGNNCGIPASQRSSLFERLQPILSQYGLSLVTG :OrigSeq
cons         : ------EEEEE-----EEEEEEEE-----EEEE-------EEEEE--------EEEE------EEEEEE----------------EEEE-----EEEEEEEE----EEEEEEEEEEEEEEEE----EEEEEEEEEEE--------EEEE----EEEEE----------------------E--HHHHHHH---EEE-- :cons
dsc          : ------EEEEE-----EEEEEEEE-----EEEEE--EEEEEEEEEEEE-EEEEEEEEE-----EEEEEE-----EEEEEEE---EEEEEE--EEEEEEEEEE---EEEEEEEEEEEEEEEEEE--EEEEEEEEEEEEE-------EEEEE--EEEEEEE---EEE------------EEEE----EEEEEEEEEEE-- :dsc
mul          : -------EE---------------------EE---------------------------------EEE-------------------E-------EEEEEE------------E----EEEE-----EEEEEEEEEEE-----------------------------------------EEE---HHHH---EEEE-- :mul
nnssp        : -------EEEE-----EEEEEEEE-----EEEE---------EE--------------------EEEEE----------------EEE------EE-EEEEE----------EEEEE-EEEE----EEEEEEEE------------EEE-------EE---------------------HHHHHHHHHHH---EEE-- :nnssp
phd          : --E---EEEEE----EEEEEEEEE----EEEEE-------EEEEE--------EEEE------EEEEEE-----------------EEE-----EEEEEEEEE---EEEEEEEEEEEEEEEE----EEEEEEEEEEE--------EEEE----EEEEE----------------------E--HHHHHH----EEE-- :phd
pred         : --------EEE---------EEE------EEEE------------------------------EEEEEE----------------EEEE--------EEEEE----------EEEEEEEEEE-----EEE----------------EEE----EEEE--------------------------HHHHHHH-------- :pred
zpred        : ----EEEEEE------EEEEEEEE------EEEEEEE--------------------------EEEEE-----------------EEEE-----HEEEEEE---------EEEEEEEEEEEEE---EEEEEEEEEEEE------EEEE-----EEEEE--------------------EEEEE--EEEEEEEEEEE-- :zpred


access       : EE-BBBEBBBBEEEBEBBBBBBBBEEBBEBBBBBE-BBEBBBBBBBEEEBEB--EBBEBEE-E-BBBEBBEE-EB-EB-BEEEBEBEBBEBBEBBBBBBBBEEEEEBEB-BB-BBBBEBBBE-BEBBBBBBBEBBBBBEEEEEEBBBBBBEBEBBBBBBEEEBEBBEEEBEBEEEEBBBBB-EBEEBBBBBBBEBBEE : access

PHD Rel      : 931264388865873366268886479213784565303312431354432203330358887369998168888995246789514632222133259997166321243368887736636898199999666341589988516854661789833897478988635999764210124256753245255509 : PHD Rel
Pred Rel     : 007778876878997777778867799878895799998766068899777777777799999769995899998997777999788876676556658808889077778778666077887999666666566667999099078857898668870999877999087779999866677768888866655000 : Predator Rel


dssp         : -EEEE--EEEE---EEEE--EEEEE--EEEEEE-HHH-----EEEE--EEEEEEEEEE--E--EEEEEE----EEEEEEEE--EEEE--E--------EEEEEE---EEEEEEEEEEEEEEEE--EEEEEEEEE----E------EEE----EEEEEEEEE------E-----HHH--EEEEEHHHHHHHH--EE--- :dssp
define       : ------EEEE----EEEEEEEEEE---EEEEEEE-------EEEE---------------EEEEEEEEE---EEEEEEEEE---EEEE---------EEEE------EEEE-EEEE-EEEEE---EEEEEEEEEE--------EEEEEE---EEEEEEEE---------------EEEEEEE-HHHHHHHHEEEEEEE :define
stride       : -EEEE-EEEEE---EEEEE-EEEEE--EEEEEE-HHH----EEEEE--EEEEEEEEEE--E--EEEEEE----EEEEEEEE--EEEE--E-------EEEEEEE---EEEEEEEEEEEEEEEE--EEEEEEEEE----E-----EEEEE---EEEEEEEEE------E-----HHH--EEEEEHHHHHHHH--EE--- :stride


Q3 values for 2alp  View SS in Rasmol

	dssp	define	stride
phd	67.68	73.23	69.70
dsc	65.15	68.18	67.17
pred	60.10	66.67	59.09
mul	48.48	60.10	46.46
nnssp	62.63	71.72	62.63
zpred	58.08	69.19	59.09
cons	66.67	74.24	68.69