Results for 2cmd-2-GJB


2cmd-2-GJB    : TTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGQEFVNK : MDH_PHOS9
MDH_PHOS9     : TTLDIIRSETFVAELKGKTPSELQVPVIGGHSGVTILPLLSQVEGVEFSDEEIKALTPRIQNAGTEVVEAKRGGGSATLSMGQAAYRFGLSLVRALQGQQGIVECAYVEGDGKHARFFAQPVLLGKDGVEEVIDYGKLSTFEQEALNNMLDTLTSDITLGEEFAA. : S57958
S57958        : TTLDVVRVKTSYAGKANVPVAEVNVPAIVGHAGVTILPLFSQATPAILSGDALTVTTKRTQDGGTEVEEAKAGKGSATLSMAYAGALFADACLKGLNGVPDVVECSYVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEALRPGIKSTIEKGVKFANQ : ECU04749
ECU04749      : TTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKRGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEKNALEGMLDTL............. : MDHG_SOYBN
MDHG_SOYBN    : TMLDVVRANTFVAEVLGVDPRDVDVPVVGGHAGITILPLLSQIKPCSFTPKEIEYLTGRIQNGGPEVVEAKAGAGSATLSMAYAAVKFADACLHALRGDAGIIECAYVASQVTELPFFASKVRLGRVGVEEILPLGPLNDYERESLEKAKKELAASIEKGISFIRK : MDHM_PIG
MDHM_PIG      : TTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETD.CYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASIKKGEEFVKN : MDHM_YEAST
MDHM_YEAST    : TTLDSIRAARFISEVENTDPTQERVNVIGGHSGITIIPLISQTNHKLMSDDKRHELIHRIQFGGDEVVKAKNGAGSATLSMAHAGAKFANAVLSGFKGERDVIEPSFVDSPLFKSEFFASPVTLGPDGIEKIHPIGELSSEEEEMLQKCKETLKKNIEKGVNFVAS : BNGMDH
BNGMDH        : TTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLSSQVTPSSFTPSEIEYLTNKIQHGGTDVVEAHAGVGSSPLPIILAAP.FADACLRGLRGDANVIECSFVASQVTDY.FLCTKVRLGRTGAEEVFQLGPLNEYERVGLEKAKEELAGSIQKGVDFIRK : CRU40212
CRU40212      : TTLDVVRAKTFYAEKNGLDVASVDVPVVGGHAGVTILPLFSQATPATMSAEVLDALTKRTQDGGTEVVQAKAGKGSATLSMAYAAALFADSCLRGLNGAP.VVECTYVESTVTDAPYFASKVKLSTEGVDKIHDLGPLSDYEKAGLKAMMPELLASIEKGVQFVKG : CRU40465
CRU40465      : TSLDIVRANTFVSEAKGLDMKDVDVPVIGGHAGSTILPLLSQTTPVTFTEAEKKAMTDKIANAGTVVVEAKAGKGSATLSMAYAAARMAESTLLGLNGEPNIYECAFVQSDVVADCFFASKVLLGPNGVAKVMGLGELDAFEQAAMAAMLPQLKSEIQKGLDFVKS : CELF20H111
CELF20H111    : TTLDVVRSQAFVSELKGHDASKTVVPVVGGHAGITIIPLLSQVKPTKFSEEEISKLTPRIQDAGTEVVNAKAGAGSATLSMALAGARFANALVRGIKG.EKNVQCAYVASDAVKGVYFSTPVELGPNGVEKILGVGKVSAYEQKLIDASVPELNKNIAKGVAFVKG : S73494
S73494        : TLLDSARLKFAIAEKYGMSSRDVQAYVLGEHSSVSIISAKIAGLPKHFSKAEFAEIDHFIRRRAYEIIERK...GATFYGIGEATAEVAELILRDTKEVRVVASLINGQYGAKDVMFGTPCVLG.RNGVEKILEI.ELSATEKAGLDKSIQVLKDNIKLAK..... : TGU23207
TGU23207      : NVLDSARFRRFIADQLEISPRDIQATVIGTHHMLPLARVTVSGFPREFIKKKLAEIVERTKKAGGEIVRLLG.QGSAYYAPALSAITMAQAFLKDEKR...VLPCSVYCQGEYGLHFIGLPAVIGGGGIEQVIEL.ELTHEEQECFRKSVDDVVELNKSLAAL... : I38013

              : 147-------157-------167-------177-------187-------197-------207-------217-------227-------237-------247-------257-------267-------277-------287-------297-------307--- :
OrigSeq       : TTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGQEFVNK :OrigSeq
cons          : ---HHHHHHHHHHHH-------EEEEEE-----EEEEE-----------HHHHHHHHHHHH----HHHHHH-----HHHHHHHHHHHHHHHHHHHH-----EEEEEEE--------EE--EEE-----EEEEE-----HHHHHHHHHHHHHHHHHHHHHHHHH--- :cons
dsc           : ---HHHHHHHHHHHH-------EEEEEE-----EEEE------------HHHHHHHHHHHH---HHHHHHH-----HHHHHHHHHHHHHHHHHHHH------EEEEE-------------HHH-----HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH--- :dsc
mul           : -EEEEEHHHHHHHHHH-------EEEEE-----EEEEEEEEE-----H--HHHHHHHH-------HHHHHH----------HHHHHHHHHHHHHH------EEEEEEE------HHHHHHHH-------HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--- :mul
nnssp         : -HHHHHHHHHHHHHHH-------EEEEE-------EE------------HHHHHHHHHHHHH---EEEE--------HHHHHHHHHHHHHHHHHHH-----EEEEEEE--------EE---------------------HHHHHHHHHHHHHHHHHHHHHHHHHH- :nnssp
phd           : ---HHHHHHHHHHHH-------EEEEEE----EEEEEEEEE--------HHHHHHHHHHHH----HHHHHHH----HHHHHHHHHHHHHHHHHHH------EEEEEEEE-----EEEEE-EEEE----EEEEE-----HHHHHHHHHHHHHHHHHHHHH---E--- :phd
pred          : ---EEEHHHHHHHHH-------EEEEEE------EEEE-----------HHHHHHHHHHHHH---EEEEE-------HHHHHHHHHHHHHHHHHHH-----EEEEEEE---------------------EEE------HHHHHHHHHHHHHHHHHHHHHHH----- :pred
zpred         : EEEEEHHHHHHHHHH------EEEEEEEE----EEEEEEEEE------HHHHHHHHHHHE-----HHHHHH-----EEEEHHHHHHHHHHHHHH-------EEEEEEH-------EEEEEE-------HEEEEH----HHHHHHHHHHHHHHHHHHHHH------- :zpred


access        : EE-EBBEBE-BBBEBEEEEEEEBEBEBBBE-BBBBBBEBBBEB-E-EBEEEEBEEBEEEBEEEBEEBBEBEEEEEEBBBBBB-BBBEBBEBBBEBBEEEEEBBEBBBBEBEBEEB-BBBBEB-BEEE-BEEBBEBEEB-EEEEEBBEEB-EEBEEEBEEB-EBBEE : access

PHD Rel       : 9822333326789862889884267785378526888652127984245689999998764277335556528883167899999999999998627998447888742466413443102553787527774389731689999988778888766414212289 : PHD Rel
Pred Rel      : 0076668888877776999987608996699996907666778998887688899888877776670000678898557788988888888988886898667767767788866667677666799966567888886888999999999788888867665000 : Predator Rel


dssp          : -HHHHHHHHHHHHHHH---HHH----EEE------EEE-HHH-------HHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH------EEEEEEE-------EEEEEEEEE--EEEEE-------HHHHHHHHHHHHHHHHHHHHHHHHHH- :dssp
define        : HHHHHHHHHHHHHHHHH----EEEEEEEE-----EEEEE---------HHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHEEEEEEEEEE--------EEEEEEEEEE----------EEEEHHHHHHHHHHHHHHHHHHHHHHHH--- :define
stride        : HHHHHHHHHHHHHHHH----------EEE------EEE-HHH-------HHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHH-----EEEEEEE-------EEEEEEEEE--EEEEE-------HHHHHHHHHHHHHHHHHHHHHHHHHH- :stride


Q3 values for 2cmd-2-GJB  View SS in Rasmol

	dssp	define	stride
phd	75.90	75.30	77.11
dsc	73.49	74.70	74.70
pred	72.29	71.69	73.49
mul	67.47	65.66	67.47
nnssp	78.92	76.51	80.12
zpred	69.28	71.08	69.88
cons	80.12	78.31	81.33