Results for 2cyp


2cyp         : TPLVHVASVEKGRSYEDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLEEQGL : ATAPCYT
ATAPCYT      : ...MVKKSY..PEVKEEYKKAVQRCKRKLRGLIA...EKHCAPIVLRLAWHSAGTFDVKTKTG.GPFGTIRHPQELAHDANNGLDIAVRLLDPIKELFPILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKV..EPPPEGRLPQATKGVDHLRDVFGRMGLNDKDIVALSGGHTLGRCHKERSGFEGAWTPNPLIFDNSYFKEIL.........SGEKE......GLLQLPTDKALLDDPLFLPFVEKYAADEDASFEDYTEAHLKLSELGFADKE................ : CUCTBAP
CUCTBAP      : IRRFNAASH..PKCLASDPEQLKSAREDIKELLK...TTFCHPILVRLGWHDAGTYNKNIEEWGGANGSLRFDVELGHGANAGLVNALKLIEPIKKKYSNVTYADLFQLASATAIEEAGGPKIPMKYGRVDVVPEQCPEEGRLPDAGPPAAHLREVFYRMGLNDREIVALSGAHTLGRSRPERSGWGKPWTVQWLKFNNSYFKDIK.........ERRDE......ELLVLPTDAALFEDPSFKVYAEKYVEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDDASSKPAGE : PERM_PHACH
PERM_PHACH   : ...AVCPDG..TRVTNAACCAFIPLAQDLQETLFQGDCGEDAHEVIRLTFHDAIAISQSLGPQGGADGSMLHFIEPNFSANSGIDDSVNNLLPFMQKHDTISAADLVQFAGAVALNCPGAPRLEFMAGRPNTT..IPAVEGLIPEPQDSVTKILQRFEDAGFSPFEVVSLLASHTVARADKVDETIDAAFDSTPFTFDTQVFLEVLLKGTGFPGGEVMSPLPLGSTGEMRLQSDFALARDERTACFWQSFVNEQEFMAASFKAAMAKLAILGHSRSSLIDCSDVVPVPKPAVN : GHU37060
GHU37060     : ......MAF..PVVDTEYLKEIDKARRDLRALIA...LKNCAPIMLRLAWHDAGTYDVSTKTG.GPNGSIRNEEEFTHGANSGLKIAIDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSN..ICPREGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTNEPLKFDNSYFLELL.........KGESE......GLLKLPTDKALLDDPEFRKYVELYAKDEDAFFRDYAESHKKLSELGFTPTSARSKVMVKDSTVLAQG : YSCCCP
YSCCCP       : TPLVHVASVEKGRSYEDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLEEQGL : ATSTASCPX
ATSTASCPX    : RSFNSTTAA..TKSSSSDPDQLKNAREDIKELLS...TKFCHPILVRLGWHDAGTYNKNIKEWGGANGSLRFDIELKHAANAGLVNALNLIKDIKEKYSGISYADLFQLASATAIEEAGGPKIPMKYGRVDASPEDCPEEGRLPDAGPPATHLREVFYRMGLDDKDIVALSGAHTLGRSRPERSGWGKPWTPEWLKFDNSYFKEIK.........EKRDE......DLLVLPTDAAIFEDSSFKVYAEKYAADQDAFFKDYAVAHAKLSNLGAEFNPPEGIII.......... : ATTBASCPX
ATTBASCPX    : TRKIS......PKCAASDAAQLISAKEDIKVLLR...TKFCHPILVRLGWHDAGTYNKNIEEWGGANGSLRFEAELKHAANAGLLNALKLIQPLKDKYPNISYADLFQLASATAIEEAGGPDIPMKYGRVDVVPEQCPEEGRLPDAGPPADHLRDVFYRMGLDDKEIVALSGAHTLGRARPDRSGWGKPWTVKWLKFDNSYFKDIK.........EKRDD......DLLVLPTDAALFEDPSFKNYAEKYAEDVAAFFKDYAEAHAKLSNLGAKFDPPEGIVIENVP.....E : CATA_ECOLI
CATA_ECOLI   : THRDMGSRYIGPEVPKEPQPIYNPTEQDIIDLKFAIASGLSVSELVSVAWASASTFRGGDKRG.GANG.ARLAPQRDWDVNAAAVRALPVLEKIQKESGKASLADIIVLAGVVGVKAASAAGLPFAPGRVDAR..QDQTDIEMFELLEPADGFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTALVGGMRVLGANFDNGVFTDRV.........GVLSN......DFFVNLLDMRYEWKATDESKELFEGRDRETGEVKFTASRADLVFGSNSVLRAVAEVYASSDAHEKFV : CSU60413
CSU60413     : ...VTCSDG..TVVPDSMCCDFIPLAQDLQSMVLQNECGEDAHEIIRLTFHDAIAISQSLPPSTGADGSMLLFVEPEFQASNGIDDSVNNLIPFLSSHPNITAGDLVQFAGAVALNCPGAPR.ELLAGRKNAV..APAIDGLIPVPQDNVSTILARFADAGFSPFEVVSLLASHSVARADKVDPTLDAAFDTTPFTFDTQIFLEVLLKGVGFPGGEVASPLPFGDTGMMRLQSDFALARDERTACFWQGFVDQQDFMAQSFQAAFEKMAILGSNAADLINCSAVVPQSVGPVT : MCU43561
MCU43561     : ............MVDQQYMEAIEGARRDLVALVQ...SKNCAPIFLRLAFHDAANFNAADKTG.GVNGSLRLQEELGQPPNGGIKVGIDLIEEVKKKHPTVSYADLYQLAGVVAVGASGGPAIFFVPGRKDTD..VADTLN.IPNPNGGADHLRTVFHQMGLVDKDIVTLSGAHTLGRAHSNISGFDGPFTREPLKFDNSYYVELL.........KGDTE......GLVKFPTDKVLLQDDVFRPLVEIYAKHQDAFFRDYAESHKKMSELGFTPKFPNPTTGGGCHSHARHC : S66265
S66265       : .....MGRV..PIVNENYRRVIEAARRDLHRSLVQD.NNNSAPILLRLSFHDAVDYDAATKRG.GANGSVRLAQELNRTPNKGIETAVRFCEPIKRRHPDITYADLYQLAGIVAVEVTGGPAI.......DAD..VADQDN.IPNPRRGADHLRTVFYRMGLNDKDIVVLSGAHALGGAHKDRSGFDGDFTRNPLTFDNSYFVELL.........RGDTP......GLVKFPTDKALLTDPRFRPFVDLYARDQRAFFRDYAESHKKMSLLGLNHPESNLYESNSCSTRLSVV : TGU23207

             : 2---------12--------22--------32--------42--------52--------62--------72--------82--------92--------102-------112-------122-------132-------142-------152-------162-------172-------182-------192-------202-------212-------222-------232-------242-------252-------262-------272-------282-------292 :
OrigSeq      : TPLVHVASVEKGRSYEDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLEEQGL :OrigSeq
cons         : ---EEE--------HHHHHHHHHHHHHHHHHHHHH--------EEEEEE--------------------EHHH----------HHHHHHHHHHHH------HHHHHHHH--HHEEE---------------------------------HHHHHHHHHHH-----EEEEE-----------------------------HHHHHHHH--------------------EEEE----EE----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------EE--------- :cons
dsc          : ---EEHHHH-----HHHHHHHHHHHHHHHHHHHHH--------EEEEHHHH------------------HHHHHHHH--HHHHHHHHHHHHHHHH-----HHHHHHHHH--HHEEE---------------------------------HHHHHHHHHHH----HHHHHH--HHHHHHHH---------------HHHHHHHHHHHHHHHHHHH-------------EEE-----HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------- :dsc
mul          : ------------------HHHHHHHHHHHHHHHH-------HHHH-HHHHH-------------------H-HH----------HHHHHHHHHHH---------HHHHHHHHHEE-----------------------------------HHHEHHHHHH------HHHHHH-----------------------------HHHHH----------------------EEH----HHH-----HHHHHHHHH-HHHHHHHHHHHHHHHHH------------E---------- :mul
nnssp        : ----------------HHHHHHHHHHHHHHHHHHH---------EEEEE----------------------------------HHHHHHHHHHHHH------HHHHHHHHHHHHHH---------------------------------HHHHHHHHHH-------EEEE-----------------------------HHHHHHHH----------------------------------HHHHHHHHHHH-HHHHHHHHHHHHHHHHH----------------------- :nnssp
phd          : --EEEE--------HHHHHHHHHHHHHHHHHH-----------EEEEEE-------------------EEEEE--------------HHHHHHHH------HHHHHHHH---EEEEE-----EEE------------------------HHHHHHHHHHH-----EEEEEE-----------------------------HHHHH---------------------EEEEEE---EE-------EHHHHH--HHHHHHHHHHHHHHHHHH----------EEEE--------- :phd
pred         : ---EEEEE-------HHHHHHHHHHHHHHHH-----------HHHHHHHH--------------------HHHHHH--------HHHHHHHHHHHH--------HHHHHHHHHEEE----------------------------------HHHHHHHHH------EEEEE---------------------------------------------------------EEEE-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHH------------EEE-------- :pred
zpred        : ----------------HHHHHHHHHHHHHHHHH---------EEEEEHHHH-------------------EEHHHH-----HHHEEEEHHHHHHH-----EEEEEEEEHHHHEEEEE------EEE-----------------------HHEEEEEEEE----HHHHHHHHHHHHHEE----------------------HHHHH----------------------EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------- :zpred


access       : EEEBBBEE-EEEEB-EE--EBBEEBEEEBEEBBEEEE-E-BBBBBB-BBB--BB-BEEE-EEEEE-EBBB-BBEEBEEEBEEBBEBBBEBBEEBEEEBEEBBBBEBBBBBBBBBBEB-EEEEBBB--E--EEEEE--EEEEEBEE-EEEBE-B-BBBB-BEBEEEEBBBBBBB-BBBEE-EE-EE-E-E----BBEBE--BBBEBBEEE-E-EEEEEEEE-EEEEEBBBBB--E-BBBEEEEB-BBBEB-BEEEEBBBEEBBEBBEEBBEBBBE-EEE--BBBBB-E-EEEEE : access

PHD Rel      : 96476337888622133346788889999985157897656322576513335554446578998664354311368666753111043545432258862146788752322322159973233268757997667656888788865144799998706798436877357312434456667788866765532651122324788887786434578899833787616612136986411245322326777888999999987526778988970541389877889 : PHD Rel
Pred Rel     : 00700560579990788099999999799889777000898765007756776667878889999999657768669878866658586856555879988686688788608765689999776989987889998999999909997768897999868999000995777666668999999999997888777777866555677578887777766567976500667766656098877999888668889888999999998679988990999867766777000 : Predator Rel


dssp         : -----E--------HHHHHHHHHHHHHHHHH---HHHH---HHHHHHHHHHHH---E----E------HHH-HHHH--HHH---HHHHHHHHHHHHH-----HHHHHHHHHHHHHHH-------E--------HHH-------------HHHHHHHHH-----HHHHHHHHHHHH--EE-HHHH---EE----------HHHHHHHH--EEEEE-----EEEEE----EE-HHHHHHHH-HHHHHHHHHHH--HHHHHHHHHHHHHHHHH---E--------E----HHHH-- :dssp
define       : -EEEEEEEE----HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH----------------HHHHHHH-----HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH-EEEEEEEEEEE-----------EEEEE-HHHHHHHHHHHH--HHHHHHHHHH---EEEEE--------------EEEEHHHHHHHHHHEEEE-----EEEEE-----EEEEHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-----EEEEEEEHHHHH- :define
stride       : -----E--------HHHHHHHHHHHHHHHHH----HHH--HHHHHHHHHHHHHH--E----E------HHH-HHHHH-HHH--HHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH------E--------HHH-------------HHHHHHHHHH----HHHHHHHHHHHH--EE--------EE---------HHHHHHHHH--EEEEEE---EEEEEE---EEE-HHHHHHHH-HHHHHHHHHHHH-HHHHHHHHHHHHHHHHH---E--------E----HHHH-- :stride


Q3 values for 2cyp  View SS in Rasmol

	dssp	define	stride
phd	61.43	57.68	60.75
dsc	68.94	63.82	70.31
pred	68.26	62.46	68.26
mul	72.01	61.09	71.33
nnssp	69.62	59.04	68.94
zpred	67.58	60.07	67.92
cons	67.24	61.77	67.24