Results for 2sodb


2sodb         : ATKAVCVLKGDGPVQGTIHFEAKGDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIGIAK : SODP_PEA
SODP_PEA      : AKKAVSVLKGTSAVEGVVTLTQDDGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNKLTHGAPEDEIRHAGDLGNIVANAEGVAEATIVDNQIPLTGPNSVVGRALVVHELQDDLGKGGHELSLSTGNAGGRLACGVVGLTP : SODE_RABIT
SODE_RABIT    : ALHAVCRVQPSARVSGLVVFRQLGAQLEAFFDLEFPVEASRAIHVHQFGDLSQGCDSTGAHYNPLAVQHP......QHPGDFGNFAVRD.GRLWKYRSGLAASLAGPHSIVGRAVVVHAGEDDLGRGGNAASVENGNAGPRLACCVVGASG : SODC_BRAOC
SODC_BRAOC    : .AKGVAVLNSSEGVKGTIFFTHEGGATTVTGTVSGLRPGLHGFHVHALGDNTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNIIVGDDGTATFTITDSQIPLSGPNSIVGRAIVVHADPDDLGKGGHELSLSTGNAGGRVACGIIGLQG : SODC_PIG
SODC_PIG      : ATKAVCVLKGDGPVQGTIYFELKGKTVLVTGTIKGLAEGDHGFHVHQFGDNTQGCTSAGPHFNPESKKHGGPKDQERHVGDLGNVTAGKDGVATVYIEDSVIALSGDHSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIGITQ : HCSODC
HCSODC        : .NRAVAVLRGDP.VTGTVWFSQDKDPCVIKGEIKLTP.GLHGFHVHQYGDSTNGCTSAGPHFNPFNKTHGGPKDDVRHVGDLGNVEAGADGVAHFEIKDHLVKIHGEHTVVGRSLVVHAGTDDLGKGKKEESLKTGNRGARVACGVIATAA : DGU47889
DGU47889      : .......INGDA....TVFFEQDTAPVKVTGEVL.LAKGLHGFHVHEFGDNTNGCMSSGPHFNPRDKEHGAPTDENRHLGDLGNIQAAGDCPTAVSITDSKITLFGADSIIGRTVVVHADA.............................. : SODE_BRUPA
SODE_BRUPA    : ...AIAVLHSDN.INGTIHFQQDK..TTISGEIKLTP.GLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGDPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHADQDDLGKGKKDESLKTGNAGGRVACGIVAISA : HDASD1
HDASD1        : IVVPVQQLDPQNKDVGTVEIT...AYGLVFTPKLDLAHGLHGFHIHEKPDGLVAGLGAGGHWDPQTQKHGYPWSDDAHMGDLPALFVMHD..GSATTPVLAPRLKKLAEVKGHSLMIHAGGDNHSDH.PA...PLGGGGPRMACGVIK... : S52859
S52859        : EMHAICRVQPSAQITGLVLFRQLGSRLEAYFSLEFPAEQNRAIHVHEFGDLSQGCDSTGPHYNPMEVPHP......QHPGDFGNFVVRN.GQLWRHRVGLTASLAGPHSILGRSVVVHAGEDDLGKGGNQASLQNGNAGRRLACCVVGTSS : SODC_XENLA
SODC_XENLA    : .VKAVCVLAGSGDVKGVVRFEQQDGDVTVEGKIEGLTDGNHGFHIHVFGDNTNGCLSAGPHFNPQNKNHGSPKDADRHVGDLGNVTAEG.GVAQFKFTDPQISLKGERSIIGRTAVVHEKQDDLGKGGDDESLKTGNAGGRLACGVIGFCP : D85239
D85239        : TKKAVAVLKGTSQVEGVVTLTQDDGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGLTP : SODC_YEAST
SODC_YEAST    : .VQAVAVLKGDA.VSGVVKFEQASEPTTVSYEIANSPNAERGFHIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGKGDTEESLKTGNAGPRPACGVIGLTN : SODC_HAEPA
SODC_HAEPA    : IEVKVQQLDPANKDVGTVTIT...NYGLVFTPNLGLAEGLHGFHIHENPDGLTSGLAAGGHWDPGAKQHGYPWQDDAHLGDLPALTVLHD..GTATNPVLAPRLKKLDEVRGHSIMIHAGGDNHSDH.PA...PLGGGGPRMACGVIK... : SODC_SCHMA
SODC_SCHMA    : .MKAVCVMTGTAGVKGVVKFTQETGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAGAHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRTMVIHENEDDLGRGGHELSKVTGNAGGRLACGVIGLAA : CET01D31
CET01D31      : DTIAVAILITREAHIGRFTFSQL.TALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRVGAPFSKLSPSLG....DITETGKFDRIVEWP....VIDVVGRAVVIYS.FSTAEWSLRAHFGEKPLACG......TIGIAKVRA......... : SODP_POPTM
SODP_POPTM    : AKKAVAVLKGQSRVEGSSTLHQD.RQQQLMFVSLAYTQGFMVFTYMSMVIPQMGVSQQ.DHILIQQVDTWCSEDEIRHAGDLGNIVANAEGVAECRQSWQIRYHSLPNSVVGRALVVHELQDDLGKGGHELSLSTGNAGGRLACGVVGLTP : PBU42580244
PBU42580244   : PVSAIAVLEGP..VKGTVRFVEE.SKVKISVDISLKPNRKHGFHVHEAGDLTDGCTSACAHFNPFGTAHGGPDSKIRHVGDLGNILADKNGKAKYSFYDSMIKLRGKCNIIGRAIVVHADTDDLGLGGNAESLKTGNAGKRIGCAVIGYAK : SODC_SCHPO
SODC_SCHPO    : MVRAVAVLRGDS.VSGVVTFEQVDSQVSVIVDLVNDANAKRGFHIHQFGDNTNGCTSAGPHFNPEGKTHGDRTAAVRHVGDLGNLESDAQGNIKTTFSDSVISLFGANSIIGRTIVIHAGEDDLGKGTSEESLKTGNAGARNACGVIGIAV : SODC_NEUCR
SODC_NEUCR    : .VKAVAVVRGDS.VKGTVIFEQESAPTTITYDISNDPNAKRGFHIHTFGDNTNGCTSAGPHFNPHGTTHGDRTAEVRHVGDLGNIETDAQGNAKGTVTDNLVKLIGPESVIGRTVVVHAGTDDLGKGGNEESLKTGNAGPRPACGVIGISQ : CELZK4302
CELZK4302     : .KRAVAVLRG.T.VFGTVWLTQKAEETEFEGEIKLSP.GLHGFHIHQYGDSTDGCTSAGPHFNPCKMNHGGRDSVVRHVGDLGNVEAGADGVAKIKFSDKVVSLFGANTVIGRSMVVHVDRDDLGQGKAEESLKTGNAGARAACGVIALAA : SODC_CARCR
SODC_CARCR    : TVKAVCVLKGEDPVKGIIYFEQQGGPVTLSGSITGLTEGKHGFHVHEFGDNTNGCTSAGAHFNPPGKNHGGPQDNERHVGDLGNVIANKEGVAEVCIKDSLISLTGSQSIIGRTMVVHEKEDDLGKGGNDESLKTGNAGSRLACGVVGIAK : SODC_CHICK
SODC_CHICK    : TLKAVCVMKGDGPVEGVIHFQQQGGPVKVTGKITGLSDGDHGFHVHEFGDNTNGCTSAGAHFNPEGKQHGGPKDADRHVGDLGNVTAKG.GVAEVEIEDSVISLTGPHCIIGRTMVVHAKSDDLGRGGDNESKLTGNAGPRLACGVIGIAK : SODC_XIPGL
SODC_XIPGL    : VLKAVCVLRGAGETTGTVYFEQEGANAVGKGIILGLTPGEHGFHVHGFGDNTNGCISAGPHFNPASKKHAGPKDEDRHVGDLGNVTADANGVAKIDITDK.ISLTGPYSIIGRTMVIHEKADDLGRGGNEESLKTGNAGSRLACGVIGTE. : SODC_PRIGL
SODC_PRIGL    : .MKAVCVLKGTGEVTGTVLFEQAAGPVTLKGSITGLTPGKHGFHVHAFGDNTNGCISAGPHYNPFSKNHGGPDDEERHVGDLGNVEANGNGVAEFEIKDRQLHLSGERSIIGRTLVVHEKEDDLGKGGDEESLRTGNAGSRLACGVIGIAK : TCU55839
TCU55839      : ...AIVVLK.DN...VGIRFKQDH..TYVNGSVKLTP.GLHGFHVHQYGDTTNGCISAGPHFNPYNQTHGAPTDSIRHVGDLGNIRAGADGTAHISISDKHIKLPGPNSIIGRSVVVHADQDDLGKGKKQESLKTGNAGRRVACGIVASSG : SODE_ONCVO
SODE_ONCVO    : ARRAVAVLRGDA.VSGIIYFQQGSSITTISGSVSLTP.GLHGFHVHQYGDQTNGCTSAGDHYNPFGKTHGGPNDRIKHIGDLGNIVAGANGVAEVYINSYDIKLRGPLSVIGHSLVVHANTDDLGQGMREESLKTGNAGSRLACGVIGIAA : SODE_DIRIM
SODE_DIRIM    : .KKAVAVLKSDT.VNGIIYFQQNNSATTIYGTINLTP.GLHGFHIHQYGIKANGCTSAAAHYNPFEKTHGRPTNNIKHIGDLRNIKAGADGVANVNIISNHIQLSGPLSVIGRSLVVHANPDDLGKGAREESLKTGNAGSRIVCSIIGIAP : SODE_SCHMA
SODE_SCHMA    : FDPAIASFTKEP.YIGAVWFTQH.DYMYVNGSVA.LPPGLLGTHVHRYG.GGNMCLEAGPHFNPFNQRHGPRHGYPRHAGDLGNIRVGRGGVAKFDFYVTIKGLGPFDGFIGRALVIHANRDDLGRNRDEGSRTTGNSGPRLACATIGFRA : ASNCZSD
ASNCZSD       : ........NSS.........................SVPLHGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKGGHELSKTTGNSNSSMDSCAHGIQG : SODC_PINSY
SODC_PINSY    : LLKAVVVLNGAADVKGVVQFTQEGGPTTVTGKISGLSPGLHGFHVHALGDTTNGCMSTGPHFNPLGKEHGAPTDDNRHAGDLGNVTVGTDGTVEFSITDSQIPLSGPHSIVGRAVVVHADPDDLGKGGHELSKSTGNAGGRLACGVVGLQG : SODC_CERCA
SODC_CERCA    : VVKAVCVINGDV....TVHFEQQDSPVLVTGEVN.LAKGLHGFHVHEFGDNTNGCTSAGPHFNPYGNSHGAPSDLNRHLGDLGNIEASGDGATKVEISDKLITLFGENSIVGRTIVVHADPDDLGKGGHELSKTTGNAGARLGCGVIGICK : OPU7593028
OPU7593028    : .MKAICIVAGEA....RIYFKQGAEPVSITGYLL.LPRGLHGFHVHEFGDTSNGCTSAGEHFNPTRQRHGAPDAAERHVGDLGNVRSAGCALTAIHMSDNVITLFGPLSILGRSLVVHTDRDDLGLGEHPLSKTTGNSGGRLGCGIIGVCA : SODC_NPVAC
SODC_NPVAC    : .MKAICIISGDV....KIYFQQESQPLKISGYLL.LPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDHGAPDAEIRHVGDLGNIKSAGYSLTEVNMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTDHPLSKTTGNSGGRLGCGIIAICK : S57193
S57193        : .MEAIAYVEGPV.VKGNVTFIQNGENVHVHVYLTLTPG.KHGFHVHEKGDLTNACASTGGHFNPDKMDHGAPGDEVRHVGDLGNIEADANGVVDTTFTDHLISLTGKRTIVGRGLVVHELTDDLGKGCHPDSKKTGNAGGRLACGVIGVK. : YMF1_CAEEL
YMF1_CAEEL    : VIRARAYIFKAEELIGTIDFDQ..SFLKLNGSVS.LAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLACGTIGKTF : SODE_HAECO
SODE_HAECO    : VLKARAYIFEAVKTVGIIDLVQ..TLVKMNGSVS.LQPGLHGFHIHEKGDLGNGCLAAGAHFNPHKMMHGAPEDSNRHVGDLGNIETPKTGDTPILISDSVISLTGQHNVIGRAIVIHADMDDLGRGTSELSKTTGNAGARVACGVIGIL. : MTCY22G1028
MTCY22G1028   : AQSLTSTLTAPDTKVATAKFEFA.ATVTIATTGVKLTPGFHGLHIHQVGPNVAPTGGAPGNFLSGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFANIPDETTLTTGDAGKRVACGVIGS.. : SODC_CAUCR
SODC_CAUCR    : QTSATAVVKAGDKDAGAVTVTEA.HGVLLKLELK.LTPGWHAAHFHEKGDCTPDFKSAGAHVHTATTVHGLLNPDANDSGDLPNIFAAADGAATAEIYSPLVSLKGLLDADGSSIVVHANPDDHKTQ......PIGGAGARVACGVIK... : SODC_BRUAB
SODC_BRUAB    : TTVKMYEALPTGKEVGTVVIS...PGGLHFKVNMKLTPGYHGFHVHENPDGIVPALAAGGHYDPNTHHHLGPE.GDGHMGDLPRLSANAD..GKVSETVVAPHLKKLAEIKQRSLMVHVGGDNYSDK.PE...PLGGGGARFACGVIE... : SODC_PHOLE
SODC_PHOLE    : .DLTVKMTDLQTKPVGTIELS...KYGVVFTPELDLTPGMHGFHIHQNGDGVVLGGAAGGHYDPHTNKHGFPWTDDNHKGDLPALFVSAN..GLATNPVLAPRLT.LKELKGHAIMIHAGGDNHSDM.PK...ALGGGGARVACGVIQ... : SODC_LEGPN
SODC_LEGPN    : DLTAPIYTTGPKVAIGKVTFTQT.PYGVLITPDLNLPEGPHGFHLHKTA.DGNHGMHAEGHYDPNTNSHQGPYG.NGHLGDLPVLYVTSNGKAMIPTLAPRLKLS...DMHNLAVMIHANGDTYSDN.....PPQGGGGDRIACGVIK... : FTU35670
FTU35670      : .ELIVHMKDVNTKEVGTITISPYDQEGMLITPHLNLPANTHGMHIHINPDN...GIAAGGHWDPNTQKHLGPYNDNGHKGDLPVLVVNAD..GTATEPVVAPKLNSLEELAGHSLMLHAGGDNYSDK.PQ...PLGGGGARMWCGVIAD.. : RECA_LEPIN

              : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------1 :
OrigSeq       : ATKAVCVLKGDGPVQGTIHFEAKGDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIGIAK :OrigSeq
cons          : --EEEEEE------EEEEEEEE----EEEEEEEE-------EEEEEE------------------------------------EEEE-----EEEEEE-EEEEE--------EEEEEEE---------------------EEEEEEEEE-- :cons
dsc           : ---EEEEE------EEEEEEE-----EEEEEEEE-------EEEEEE-------EEE--------------------------EEEE-----EEEEEEEEEEEE--------EEEEEEE---------------------EEEEEEEE--- :dsc
mul           : -HHHEEEE--------EEEE-------EEEEEE---------HH--------------------------------------------------EE-----E-------EEEEEEEEE-------------------------EEEEE--- :mul
nnssp         : --EEEEEE-------EEEEEEE----EEEEEEE---------EEEE--------------------------------------EE------EEEEE----EEE---------EEEEE-----------------------EEEEEEEE-- :nnssp
phd           : -EEEEEEEE----EEEEEEEEE----EEEEEEEEE------EEEEEEE-----------------------------------EEEE----EEEEEEE-EEEEE----EEEEEEEEEEE---------------------EEEEEEEEEE- :phd
pred          : ---EEEEE-------EEEEEEE----EEEEEE----------EEEEE-------------------------------------EEE-----EEEEE---------------EEEEEEE-----------------------EEEEEE--- :pred
zpred         : HHHHEEEE--------EEEEE------EEEEE--------HHEEEE---------EEE-----------------EEEEEEEEEEEE------EEEEEEEEEE-----EEEEEEEEEEEHH-------------------EEEEEEEEE-- :zpred


access        : EEEBBBBBEEEEEBEBBBBBEEEEEEBBBBBEBBBBBEB--BBBBBEBEEEBEBBBBBBEEB-EEBEEEE-EEEEBEBBBEBBEBBBBBEBBBBBEBBEBBBEBEBEBBBBBBBBBBBBEEEEBEEE-EEEB-EEEEEEBEBBBBBBBB-E : access

PHD Rel       : 9389999925973279999994798459999775447885336887627788651146777798777779987544324766515662676289997224577326535664799999515776799996332469776347888888869 : PHD Rel
Pred Rel      : 0076800509999876688807999769967776689999976988888999997778999999999999999999878998875669998768866877677788987766779009879999999998878899999976666555000 : Predator Rel


dssp          : --EEEEEEE-----EEEEEEEEE--EEEEEEEEE-----EEEEEEE--------------E-------------------EEEEEE-----EE--EEEE--------------EEEE-------------------------EEEE-EE-- :dssp
define        : ----EEEEE------EEEEEEE--EEEEEEEEE-------EEEEEEE------------------------------------EEEEE--EEEEEEEEEE-------EEEEEEEEEEEE---------HHHHHHH----EEEE--EEEEEE :define
stride        : --EEEEEEE-----EEEEEEEEE--EEEEEEEEE-----EEEEEEE--------------E-------------------EEEEEE-----EE--EEEE-------------EEEEEE-----------HHH--------EEEEEEEEE-- :stride


Q3 values for 2sodb  View SS in Rasmol

	dssp	define	stride
phd	78.15	80.13	79.47
dsc	79.47	76.16	80.79
pred	82.12	77.48	80.79
mul	72.85	66.89	71.52
nnssp	84.11	74.17	82.78
zpred	69.54	68.87	70.86
cons	82.78	78.15	84.11