Results for 2tmvp


2tmvp        : SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS : S65055
S65055       : VYNITSSNQYQYFAAMWAEPTAMLNQCVSALSQSYQTQAARDTVRQQFSNLLSAIVTPNQRFPEAGYRVYINSAVLKPLYESLMKSFDTRNRIIETEEESRPSASEVANATQRVDDATVAIRSQIQLLLNELSNGHGLMNRAEFEVLLPWATAP : PMMVCP
PMMVCP       : PYTVSSPNQLVYFGSVWADPIALIDLCTVSLGNQFQTQNARTTVQQQFSDLFKTVPTRTIRFSDNGFRVFRYNSTLDPLITALLNSFDTRNRIIETENPANPNTAEIASATQRVDDATVSIRACINNLMNELARGTGMLNTVSFETISNLTWTT : MTVCOATPRA
MTVCOATPRA   : SYTVSSANQLVYLGSVWADPLELQNLCTSALGNQFQTQQARTTVQQQFSDVWKTIPTATVRFPATGFKVFRYNAVLDSLVSALLGAFDTRNRIIEVENPQNPTTAETLDATRRVDDATVAIRASISNLMNELVRGTGMYNQALFRSAVTHLGYN : S49435
S49435       : SYTITDPSKLAYLSSAWADPNSLINLCTNSLGNQFQTQQARTTVQQQFADVWQPVPTLTSRFPAGHFRVYRYELILEPLITFLMGTFDTRNRIIEVRNPQNPTTTETLDATRRVDDATVAIRSAINNLLNELVRGNGMYNQVSFETMSGLTWTS : S681641
S681641      : SYNITNPNQYQYFAAVWAEPIPMLNQCISALSQSYQTQAARDTVRQQFSNLLSAVVAPSQRFPETGSRVYVNSAVIKPLYEALMKSFDTRNRIIETEEESRPSASEVLTR.........................HNVLMMRPFPLEVKFSCC. : COAT_TMGMV
COAT_TMGMV   : PYTINSPSQFVYLSSAYADPVQLINLCTNALGNQFQTQQARTTVQQQFADAWKPVPSMTVRFPASDFYVYRYNSTLDPLITALLNSFDTRNRIIEVDNQPAPNTTEIVNATQRVDDATVAIRASINNLANELVRGTGMFNQAGFETASGLVWTT : COAT_TMVCO
COAT_TMVCO   : AYSIPTPSQLVYFTENYADYIPFVNRLINARSNSFQTQSGRDELREILIKSQVSVVSPISRFPAPAYYIYLRDPSISTVYTALLQSTDTRNRVIEVENSTNVTTAEQLNAVRRTDDASTAIHNNLEQLLSLLTNGTGVFNRTSFESASGLTWLV : COAT_CGMVS
COAT_CGMVS   : AYNPITPSKLIAFSASYVPVRTLLNFLVASQGTAFQTQAGRDSFRESLSALPSSVVDINSRFP.AGFYAFLNGPVLRPIFVSLLSSTDTRNRVIEVVDPSNPTTAESLNAVKRTDDASTAARAEIDNLIESISKGFDVYDRASFEAAFSVVWSE : HAMPCFTB

             : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151- :
OrigSeq      : SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS :OrigSeq
cons         : ---------EEEEEE-----HHHHHHHHHH------HHHHHHHHHHHHHHHH--------------EEEEEE----HHHHHHHH-------EEEEE-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----EEEHHHHH----EE-- :cons
dsc          : ----------HHHHH-----HHHHHHHHHH----HHHHHHHHHHHHHHHHHH--------------HHHHHH----HHHHHHHHH------HHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHH------- :dsc
mul          : ---------EEEE---------HHHHE--------------HHE-HH-HH----E-----------EEEEE----EE-HHHHHHHH-----EEEEE---------HHHHH------HHH-HHH---HHHHHH---------------------- :mul
nnssp        : ---------EEE--------HHHHHHHHHH-------HHHHHHHHHHHHHHH---------------EEEE----HHHHHHHHH--------EEEE--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHH----EE-- :nnssp
phd          : -EEE-----EEEEEEEE----EEEEEEE--------HHHHHHHHHHHHHHH---------------EEEEEE----HHHHHHHH-------EEEEE-------HHHHHHHH-----HHHHHHHHHHHHHHHHH-----EEE-EEEE-EEEEE-- :phd
pred         : ---------EEEE--------------------HHHHHHHHHHHHHHHHHH-------EEE-----EEEEEE----HHHHHHHH------EEEEEEE--------HHHHHHHHH----EEEHHHHHHHHHHHH--------------------- :pred
zpred        : EEEE---EEEEEEE-------HEEEEEEE-----EEEE----EEEEEE------EEEEEEEE-----EEEE----EEEEEEEEEE-HHHHEEEEEEE------HHHHHHH---------HHH----------------EE---HH--------- :zpred


access       : EEEBEEEEEBBBBBBB-BEBBEBBEBBBBBBEEEBE-EEBEEEBEEEBEEBBEEBBEBEBEBEEE-BEBBBB-BBBEEBBBBBBEB-E-EEEBBEBEEEEEEEBBEBBEBEEEBEEBEBBB-BBBEEBBEEBBEE-EBB--BBBEBBBEB--EE : access

PHD Rel      : 9265288615777764128542442111112564111125578999998515566764223368863898742321167655331477664488862998885553243422566446666899998998862687313321223311567559 : PHD Rel
Pred Rel     : 0089999905675856887965655856767776077697599998778887667787708899986998968877668888786779770599008999987755786888577766667786778998875696987690565677675000 : Predator Rel


dssp         : ---------HHHH---EE-HHHHHHHHHHH---------HHHHHHHHHHH-----------------EEE-----HHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHHHHH---EE-HHHHHHHH------ :dssp
define       : EEEEE--HHHHHH--EEEEHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHEEEE-----------EEEE----HHHHHHH------------------------------HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHEEEEEE :define
stride       : ---------HHH----EE-HHHHHHHHHHHH-------HHHHHHHHHHHH-EE--------------EEE----HHHHHHHHHHH---------------------------HHHHHHHHHHHHHHHHHHHHHH---EE-HHHHHHHH------ :stride


Q3 values for 2tmvp  View SS in Rasmol

	dssp	define	stride
phd	60.39	56.49	57.14
dsc	73.38	62.34	72.73
pred	58.44	46.10	56.49
mul	64.29	46.75	61.04
nnssp	78.57	68.83	77.92
zpred	34.42	26.62	30.52
cons	73.38	64.29	72.08