Results for 3cla


3cla         : MNYTKFDVKNWVRREHFEFYRHRLPCGFSLTSKIDITTLKKSLDDSAYKFYPVMIYLIAQAVNQFDELRMAIKDDELIVWDSVDPQFTVFHQETETFSALSCPYSSDIDQFMVNYLSVMERYKSDTKLFPQGVTPENHLNISALPWVNFDSFNLNVANFTDYFAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCNSKLK : CAT_PROMI
CAT_PROMI    : VGILVVDLSQWGRKEHFEAFQSFAQCTFSQTVQLDITSLLKTVKQNGYKFYPTFIYIISLLVNKHAEFRMAMKDGELVIWDSVNPGYNIFHEQTETFSSLWSYYHKDINRFLKTYSEDIAQYGDDLAYFPK.EFIENMFFVSANPWVSFTSFNLNMANINNFFAPVFTIGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRLLNEIQQYCDEGCK : CAT5_STAAU
CAT5_STAAU   : MTFNIINLETWDRKEYFNHYFN.QQTTYSVTKELDITLLKSMIKNKGYELYPALIHAIVSVINRNKVFRTGINSENLGYWDKLEPLYTVFNKETENFSNIWTESNASFTLFYNSYKNDLIKYKDKNEMFPKKPIPENTVPISMIPWIDFSSFNLNIGNNSRFLLPIITIGKFYSKDDKIYLPFPLQVHHAVCDGYHVSLFMNEFQNIIR.... : S37211
S37211       : ....................FTNIPCTYSMTVKLDITQIKKKRM....KLYPAMLYYLATIVNRHSEFRTAINQEELGIYDEMIPSYTIFHEDTETFSNLWTPYIPDFEAFSMAYANDMQRYGSNYGMIGKPDIPENVFNVSMIPWSTFDSFNLNLQKGYDYLIPIFTMGKYYRDDEKIILPLAIQV.......................... : CAT2_ECOLI
CAT2_ECOLI   : MNFTRIDLNTWNRREHFALYRQQIKCGFSLTTKLDITALRTALAETGYKFYPLMIYLISRAVNQFPEFRMALKDNELIYWDQSDPVFTVFHKETETFSALSCRYFPDLSEFMAGYNAVTAEYQHDTRLFPQGNLPENHLNISSLPWVSFDGFNLNITGNDDYFAPVFTMAKFQQEGDRVLLPVSVQVHHAVCDGFHAARFINTLQLMCDNILK : CAT1_STAAU
CAT1_STAAU   : MNFNKIDLDNWKRKEIFNHYLN.QQTTFSITTEIDISVLYRNIKQEGYKFYPAFIFLVTRVINSNTAFRTGYNSDELGYWDKLEPLYTIFDGVSKTFSGIWTPVKNDFKEFYDLYLSDVEKYNGSGKLFPKTPIPENAFSLSIIPWTSFTGFNLNINNNSNYLLPIITAGKFINKGNSIYLPLSLQVHHSVCDGYHAGLFMNSIQELSDRPND : CAT_STRAC
CAT_STRAC    : PTPAPIDLDTWPRRQHFDHYRRRVPCTYAMTVEVDVTAFAAALRRSPRKSYLAQVWALATVVNRHEEFRMCLNSSDPAVWPVVHPAFTVFNPERETFACLWAPYDPDFGTFHDTAAPLLAEHSRATDFFPQGNPPPNAFDVSSLPWVSFTGFTLDIRDGWDHLAPIFTLGRYTERDTRLLLPLSVQIHHAAADGFHTARLTNELQTLLADPAW : CAT_BACPU
CAT_BACPU    : .MFKQIDEN.YLRKEHFHHYMTLTRCSYSLVINLDITKLHAILKEKKLKVYPVQIYLLARAVQKIPEFRMDQVNDELGYWEILHPSYTILNKETKTFSSIWTPFDENFAQFYKSCVADIETFSKSSNLFPKPHMPENMFNISSLPWIDFTSFNLNVSTDEAYLLPIFTIGKFKVEEGKIILPVAIQVHHAVCDGYHAGQYVEYLRWLIEHCDE : CAT1_CLOPE
CAT1_CLOPE   : MKFNLIDIEDWNRKPYFEHYLNAVRCTYSMTANIEITGLLREIKLKGLKLYPTLIYIITTVVNRHKEFRTCFDQKKLGYWDSMNPSYTVFHKDNETFSSIWTEYDENFPRFYYNYLEDIRNYSDVLNFMPKTGEPANTINVSSIPWVNFTGFNLNIYNDATYLIPIFTLGKYFQQDNKILLPMSVQVHHAVCDGYHISRFFNEAQELASNYET : CAT_CLOBU
CAT_CLOBU    : MNFNLIDINHWSRKPYFEHYLNNVKCTYSMTANIEITDLLYEIKLKNIKFYPTLIYMIATVVNNHKEFRICFDHKSLGYWDSMNPSYTIFHKENETFSSIWTEYNKSFLRFYSDYLDDIKNYGNIMKFTPKSNEPDNTFSVSSIPWVSFTGFNLNVYNEGTYLIPIFTAGKYFKQENKIFIPISIQVHHAICDGYHASRFINEMQELAFSFQE : CAT_CAMCO
CAT_CAMCO    : MQFTKIDINNWTRKEYFDHYFGNTPCTYSMTVKLDISKLKKDGK....KLYPTLLYGVTTIINRHEEFRTALDENQVGVFSEMLPCYTVFHKETETFSSIWTEFTADYTEFLQNYQKDIDAFGERMGMSAKPNPPENTFPVSMIPWTSFEGFNLNLKKGYDYLLPIFTFGKYYEEGGKYYIPLSIQVHHAVCDGFHVCRFLDELQDLLNK... : CAT_VIBAN
CAT_VIBAN    : MEFRLVDLKTWKRKEYFTHYFESVPCTYSMTVKLDITTIKTGKA....KLYPALLYAVSTVVNRHEEFRMTVDDEQIGIFSEMMPCYTIFQKDTEMFSNIWTEYIGDYTEFCKQYEKDMQQYGENKGMMAKPNPPVNTFPVSMIPWTTFEGFNLNLQKGYGYLLPIFTFGRYYEENGKYWIPLSIQVHHAVCDGFHTCRFINELQDVIQSLQN : BASR_ECOLI

             : 6---------16--------26--------36--------46--------56--------66--------76--------87--------97--------107-------117-------127-------137-------147-------157-------167-------177-------187-------197-------207-------217 :
OrigSeq      : MNYTKFDVKNWVRREHFEFYRHRLPCGFSLTSKIDITTLKKSLDDSAYKFYPVMIYLIAQAVNQFDELRMAIKDDELIVWDSVDPQFTVFHQETETFSALSCPYSSDIDQFMVNYLSVMERYKSDTKLFPQGVTPENHLNISALPWVNFDSFNLNVANFTDYFAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCNSKLK :OrigSeq
cons         : ---EE--------HHHHHHH-------EEEEEEEEHHHHHHHHH---------EEEEHHHHH---HHHHHH-------EEE-----EEEEE-----EEEEE------HHHHHHHHHHHHHHH----------------------------------------EEEEEEE--EEE----EEE-EEEEEEEE------HHHHHHHHHHHHH---- :cons
dsc          : ----HHHH--HHHHHHHHHH-------EEEEEEEEHHHHHHHHH-----------EEHHHHH--HHHHHHH-------EEE-----EEE------------------HHHHHHHHHHHHHHH-------------------------------------------HHHHHHHHH----------EEEE--------HHHHHHHHHHHHH---- :dsc
mul          : ----H--H--------HH---------EEEEEEEHHHHHHHHH------EEEEEEEEEEEHH-----HHHHH--------------EEEEH-----------------HHHHH---HHHHH-----------------------------------------EE-EEEE-------------EEEEEEEE---------HHHHHHHHH----- :mul
nnssp        : --EEEE---------HHHHHH------EEEEEEEEHHHHHHHHH---------EEEEHHHHHH--HHHHHH------EEE------EEEE------HHHHH------HHHHHHHHHHHHHHH----------------------------------------EEEEEE----------EEE-EEEHHHHH------HHHHHHHHHHHHHHHHH :nnssp
phd          : ---EE--------HHHHHHH----EEEEEEEEEEEEHHHHHHH-----EEEEEEEEEEEEEE----HHHHE-------EEEE----EEEEE-----EEEEE------HHHHHHHHHHHHHHH-------------------E----EEEE-----------EEEEEEEE--EEE---EEEEEEEEEEEEEE----EEEEHHHHHHHHHH---- :phd
pred         : -----------HHHHHHHHHHHH----EEEEEEE-HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH-----EEE------EEEEE----------------HHHHHHHHHHHHHH---------------------------------------------------------EEE---EEEEEE------HHHHHHHHHHHH----- :pred
zpred        : --------------------------EEEEEEHHHHHHHHHHHH-----EEEEEEEEEEEEEH---HHHHHH----H-EEE-----EEEE-----HHH----------HHHH----HHHHH------EE--------EEEEEEEEEEEEE-----------EEEEEEEEEE-------EEEEHHHHEEE------------------------ :zpred


access       : EEB-BBEBEE-EEEEBBEBBBEEBEBBBEBBBEBEBEBB-EEBEEEE-EBBBBBBBBBBBBBEEBEEB-BBBEEEEBBBB-EB-EBBBBB-EEEEEBB-BBBEB-EEBBEBBEBBBEEBEEBEE-BEBBEEEE-EEEBBBBBBB-BBBB-BB-BEB-E-BEBBBBBBBBBE-BEEE-EBBBEBBBEBBBBBBEBB-BB-BBEEBEEBBEEEEE : access

PHD Rel      : 981211577556244777511573347888877532135677525886244346777654323872121121787541233448824787213441345411435314345564477777633454336888998666432112533641344254577614666776321121687488744346777541751243225788887634899 : PHD Rel
Pred Rel     : 006666788877077889888788867550555555888888686766576668777776778788787775799876866809900778697975056667899790877788887885867798778999099998776568877878788777789986066780688608999750766559005658077657779999997777000 : Predator Rel


dssp         : --EEE--------HHHHHHHHH----EEEEEEEEE-HHHHHHHH-----HHHHHHHHHHHHH---HHH-EEEE--EEEEE---EEEEEEEE----EEEEEE------HHHHHHHHHHHHHHH---------------EEEEEEE---------------------EEEEE--EEE--EEEEEEEEEEE-----HHHHHHHHHHHHHHH----- :dssp
define       : ------------HHHHHHHHHHEEEEEEEEEEEE-HHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHH-----EEEEEEEEEEEEEEEE-----EEEEEEEEEEHHHHHHHHHHHHHHHHH--------------EEEEEE---EEEE--EEEEE------EEEEEEEEEEE---EEEEEEEEEE-----HHHHHHHHHHHHHHHHHH--- :define
stride       : --EEE-------HHHHHHHHHHH---EEEEEEEEEHHHHHHHHHH----HHHHHHHHHHHHHH--HHH-EEEE--EEEEE---EEEEEEEE----EEEEEE------HHHHHHHHHHHHHHH---------------EEEEEE----------------------EEEE---EEE--EEEEEEEEEEE-----HHHHHHHHHHHHHHHH---- :stride


Q3 values for 3cla  View SS in Rasmol

	dssp	define	stride
phd	70.89	66.67	70.42
dsc	67.14	57.28	67.61
pred	74.18	65.73	77.00
mul	62.91	49.77	61.97
nnssp	70.89	59.15	71.83
zpred	56.34	49.77	54.46
cons	77.93	66.67	77.93