Results for 3cox-2-AS.1


3cox-2-AS.1    : GNNGNIMVGRANHMWDATGSKQATIPTMGIDNWADPTAPIFAEIAPLPAGLETYVSLYLAITKNPERARFQFNSGTGKVDLTWAQSQNQKGIDMAKKVFDKINQKEGTIYRTDLFYYKTWGDDFTYHPLGGVLLNKATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDKIISSDI : SSU13981
SSU13981       : GPNGNIMTARANHVWNPTGSKQSSIPALGIDDWDNPDNPVFAEIAPMPAGLETWVSLYLAITKNPERGTFVYDAAKDRADLRWTRDQNAPAVAAAKSLFDRVNKANTTIYRYDLFQIKAFADDFCYHPLGGCVLGKATDNYGRVSGYKNLYVTDGSLIPGSIGVNPFVTITALAERNVERVIKEDI : S72824
S72824         : GKGSNAMGLLQTLMTDGPGPEGTDVPRWRQLLHQASEDPMLRLINPRRWSERTVIALVMQHLDN....SITTFTKRGKLGIRWYSSQNGEPNPSWIPIGNEVTRRLAAKIDGVAGWGELFNIPLTAHFLGGAVIGDVIDPYHRVYGYPTLYVVDGAAISANLGVNPSLSIAAQAERAASLWPNKGQ : CDPK_SOYBN

               : 319-------329-------339-------349-------359-------369-------379-------389-------399-------409-------419-------429-------441-------451-------461-------471-------481-------491-------501--- :
OrigSeq        : GNNGNIMVGRANHMWDATGSKQATIPTMGIDNWADPTAPIFAEIAPLPAGLETYVSLYLAITKNPERARFQFNSGTGKVDLTWAQSQNQKGIDMAKKVFDKINQKEGTIYRTDLFYYKTWGDDFTYHPLGGVLLNKATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDKIISSDI :OrigSeq
cons           : -----EEEE----E-------------------------EEEEE------HHHEEEEEEEE-------EEEE------EEEEEE--------HHHHHHHHHHH-----EEEEEEEEE-------EE-----EEEE--------------EEEE--------------HHHHHHHHHHHHHHH---- :cons
dsc            : -----EEE----EEE--------EEEE------------HHHHH-------EEEEEEEEE--------EEEE------EEEEHHHH---HHHHHHHHHHHHHH-----EEEEEEEEE--------------EEE---------------EEEE--------------EEEHHHHHHHHHHHH---- :dsc
mul            : ------HHHHHHHH---------------H-----------EE----------EEEEEEEE--------EEE------H------------HHHHHHHHH--------EEEEEEEHHHHHH-----------HHHH-------------EEEE--------------EEE-HHHHHHHHHHH---- :mul
nnssp          : -----EEEE--------------------------------------------EEEEEEEE-------EEEE------EEEEEE---------HHHHHHHHHHH---------------------------------------------EEEE----------------HHHHHHHHHHHHHH--- :nnssp
phd            : ------EEHHH--E-------------------------EEEEE------HHHEEEEEEEEE------EEEEE-----EEEEEE--------HHHHHHHHHH-----EEEEEEEEEEEEE---EEE-----EEEEE------------EEEEE---E---------HHHHHHHHHHHHHHHH---- :phd
pred           : -----EEEE-------------EEEE------------------------HHHHHHHHHHHH-----HHHHHH-------------------HHHHHHHHHHHHHHHH----------------EEE----EEEE--------------EEEE--------------HHHHHHHHH-HHHHH---- :pred
zpred          : ----EEEEEEEEEEE--------EEEEEEE---------HHEEE------HHEEHHHEHEE--------EEE------EEEEE---------HHHHHHHHHHHH---EEEEEEEEEE-------EE-----EEEEEEEEEEEEE---EEEEEEEEEEEEEEEEEEEEEEEHHHHHHHHHHHH---- :zpred


access         : EEEEEBBBBBBEBBEE-EEEEE-EBE-BBBE--EEEEEEBBB-BBE-EEE-EBBBBBBBBB-EEEEEB-BBB-EEEEEBEBEBBEEEEEEE-EBBEEBBEEBEEEEBBBB-BBBBBBEBBBEEBBB-BBBBBBBBEBBEE-BEBEE-E-BBBBEBBBBEB-BEB-BBBBBBBBBEEEBEEBBEEEE : access

PHD Rel        : 998413113211121788877776232324777888872235417776642122333345638987526777335686124541556887314567761034213121443222344431454132236634653134553542265358885222215777767512234799999888742899 : PHD Rel
Pred Rel       : 009907975656675990090060087889999900908000008989766570067076660000067555078096557776770997985505688877768766063786666679999777589906665799990879999970908778790990777800899999877666666000 : Predator Rel


dssp           : E----EEEEEE----------------EEEE--------EEEEEE---------EEEEEEEE-----E-EEEE----EEEE---HHHHHHHHHHHHHHHHHHHHHH---E----------E--EE---E-------------E------EEE--HHH---------HHHHHHHHHHHHHHHHHH-- :dssp
define         : EE-EEEEEEEEEE------EEEEEEEE-EEEE-------EEEEEEEE------EEEEEEEE-------EEEEE----EEEEE-HHHHHHHHHHHHHHHHHHHHHHHH------------------EEEEE------------------EEEEEE-----------HHHHHHHHHHHHHHHHHHHH- :define
stride         : E---EEEEEEE----------------EEEEE-------EEEEEE---------EEEEEEEE-----E-EEEEHHH-EEEE---HHHHHHHHHHHHHHHHHHHHHH--EE---------EE--EE---EEE-----------E------EEE--HHH--------HHHHHHHHHHHHHHHHHHHH- :stride


Q3 values for 3cox-2-AS.1  View SS in Rasmol

	dssp	define	stride
phd	67.20	59.14	63.44
dsc	65.05	64.52	60.22
pred	63.44	60.75	57.53
mul	62.37	53.76	58.06
nnssp	74.73	69.35	68.82
zpred	54.30	52.69	51.08
cons	69.89	63.44	65.05